Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G062330.8 | |
| HORVU2Hr1G030630.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G26570.1 | HORVU1Hr1G062330.8 | AT2G26570.1 | 20974974 |
| AT2G26570.1 | HORVU2Hr1G030630.1 | AT2G26570.1 | 20974974 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G259500.1 | Wheat | nucleus | 73.45 | 86.91 |
| TraesCS1D01G248300.1 | Wheat | nucleus, plastid | 66.48 | 83.82 |
| TraesCS1A01G248800.1 | Wheat | nucleus | 72.01 | 83.46 |
| Os03t0395300-01 | Rice | plasma membrane | 52.21 | 60.82 |
| EER92167 | Sorghum | nucleus | 51.44 | 59.31 |
| Zm00001d047240_P002 | Maize | nucleus | 51.0 | 58.73 |
| Zm00001d029420_P002 | Maize | nucleus | 50.44 | 58.16 |
| Bra034308.1-P | Field mustard | nucleus | 34.18 | 47.76 |
| Solyc05g042150.1.1 | Tomato | cytosol | 10.07 | 47.4 |
| HORVU2Hr1G030630.1 | Barley | nucleus | 41.15 | 46.91 |
| Solyc04g078950.1.1 | Tomato | nucleus | 15.49 | 45.9 |
| Solyc07g026880.1.1 | Tomato | cytosol | 7.52 | 44.16 |
| CDY48180 | Canola | nucleus | 35.95 | 44.04 |
| CDX77048 | Canola | nucleus | 36.39 | 43.46 |
| GSMUA_Achr6P10120_001 | Banana | nucleus | 41.59 | 42.87 |
| VIT_18s0001g10560.t01 | Wine grape | nucleus | 38.72 | 41.47 |
| AT4G33390.1 | Thale cress | nucleus | 35.51 | 41.21 |
| Bra041137.1-P | Field mustard | nucleus | 25.55 | 41.18 |
| AT2G26570.1 | Thale cress | nucleus | 36.39 | 40.77 |
| CDX72400 | Canola | nucleus | 30.42 | 40.44 |
| Solyc07g022910.2.1 | Tomato | plastid | 37.39 | 39.91 |
| CDY46119 | Canola | nucleus | 29.76 | 39.62 |
| PGSC0003DMT400039921 | Potato | nucleus | 37.28 | 39.37 |
| CDX68971 | Canola | mitochondrion, nucleus, plastid | 34.96 | 39.21 |
| KRH07566 | Soybean | nucleus | 26.66 | 39.19 |
| GSMUA_Achr5P17590_001 | Banana | nucleus | 35.29 | 38.9 |
| GSMUA_Achr10P... | Banana | cytosol | 34.62 | 38.4 |
| Solyc12g088830.1.1 | Tomato | nucleus | 35.62 | 38.2 |
| KRH45361 | Soybean | nucleus | 24.67 | 38.05 |
| PGSC0003DMT400011385 | Potato | nucleus | 37.83 | 37.87 |
| Bra033647.1-P | Field mustard | nucleus | 29.54 | 37.03 |
| CDY22380 | Canola | nucleus | 29.2 | 36.72 |
| CDX71526 | Canola | nucleus | 29.09 | 36.33 |
| PGSC0003DMT400020677 | Potato | nucleus | 37.83 | 35.26 |
| AT1G45545.2 | Thale cress | nucleus | 28.98 | 34.79 |
| AT5G42880.1 | Thale cress | nucleus | 28.76 | 34.62 |
| Solyc08g015840.1.1 | Tomato | cytosol | 7.41 | 34.18 |
| KRH51982 | Soybean | nucleus | 35.84 | 34.0 |
| CDY17054 | Canola | nucleus | 26.44 | 33.66 |
| CDY43212 | Canola | nucleus | 26.44 | 33.47 |
| KRH61284 | Soybean | nucleus | 35.95 | 33.4 |
| Bra014049.1-P | Field mustard | nucleus | 27.65 | 33.16 |
| CDY17108 | Canola | nucleus | 26.77 | 33.11 |
| Bra040259.1-P | Field mustard | nucleus | 26.44 | 32.65 |
| CDY62582 | Canola | nucleus | 26.44 | 32.65 |
| KRH15355 | Soybean | nucleus | 35.95 | 32.18 |
| HORVU5Hr1G068440.1 | Barley | cytosol | 26.55 | 30.0 |
| HORVU4Hr1G089990.4 | Barley | cytosol, nucleus, plastid | 23.01 | 27.26 |
| HORVU5Hr1G029890.1 | Barley | nucleus | 17.04 | 23.88 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G062330.8 | EnsemblPlantsGene:HORVU1Hr1G062330 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF2 |
| PFAM:PF05701 | SEG:seg | UniParc:UPI000B488D1F | UniProt:A0A287FWR1 | MapMan:20.5.8.1 | : |
Description
No Description!
Coordinates
chrchr1H:+:449194346..449198496
Molecular Weight (calculated)
100626.0 Da
IEP (calculated)
6.338
GRAVY (calculated)
-0.807
Length
904 amino acids
Sequence
(BLAST)
(BLAST)
001: EPEPLRRRRR GVRSDATSCT EAVLVREKQG ERHTRSGLPL GSRENKLGRG RANSNQREKR AEFPIGGSGR VASLRPGGIH SSXPFIPRAN REKIFSRKLI
101: LLNEIARKDF CRVIDFSATM ETPDSTHHRE VSMQEAGKQA PILAENLDPS LEIQEKLPHS LTEHQENLKT HVGHSVPASP EMFSRSDPAQ ASNNSLIDKT
201: DDATSTNNTE KANSISDNGS GSDSTMVTSE RKSNGENTDH HVSIAYTQNK RGETESRSER PYKGLVDTAA PFESVKEAVT KFGGIVDWKA YRTHTLERRG
301: AMQLELEKVK QDIPQVKESS ETAEMARSQV VEELEITKRI VEELKHKLER AQVELEQSKQ DSELAQLRAQ EMELGIDNEA SVIAQTQLAV AKERNQKAID
401: ELKMVKEGLG LTQEQYTTLV SEKDATIQRA EEAASAAKET EKRVEELTLE LFASRESLEL AHAAHHEAEE HRLGAALAKE QDCLTWEREL QQAKKELRQL
501: DEQILSKTSV QSKLDGNKDN LLRLSADLAA YMANKLSEEA GAVEEHGGSD EDREMSRSIK QALASARMEL EDVRGNITKA NEEANLIQAV AESLRTELDK
601: EKASLVTLQQ RESMASITVS SLEAELSRTK QEIEMLYTKE AESRAKMADI PKMLQRAAQE ADDAKVAAHS AREELRKSKE EAEQAKAAAT TAEVRLRAAL
701: KEIEASKASE RLALVAAQAL QESEEATGAE DSPRVTLPVG EYHLLSKRVH EAEELANERV MASLAQIKVA KESESRSLER LLEVSRSMDQ KKDALKIASQ
801: RAAMAEEGKL GAEAQLRKWR SEHKQLRKAH EAAKHAISPL STPFAEYKEA SYQENKAVLT EPKSHMSDNS MDGFASDKKL PKKKKKSLFP QMSTLFSRKV
901: QTQT
101: LLNEIARKDF CRVIDFSATM ETPDSTHHRE VSMQEAGKQA PILAENLDPS LEIQEKLPHS LTEHQENLKT HVGHSVPASP EMFSRSDPAQ ASNNSLIDKT
201: DDATSTNNTE KANSISDNGS GSDSTMVTSE RKSNGENTDH HVSIAYTQNK RGETESRSER PYKGLVDTAA PFESVKEAVT KFGGIVDWKA YRTHTLERRG
301: AMQLELEKVK QDIPQVKESS ETAEMARSQV VEELEITKRI VEELKHKLER AQVELEQSKQ DSELAQLRAQ EMELGIDNEA SVIAQTQLAV AKERNQKAID
401: ELKMVKEGLG LTQEQYTTLV SEKDATIQRA EEAASAAKET EKRVEELTLE LFASRESLEL AHAAHHEAEE HRLGAALAKE QDCLTWEREL QQAKKELRQL
501: DEQILSKTSV QSKLDGNKDN LLRLSADLAA YMANKLSEEA GAVEEHGGSD EDREMSRSIK QALASARMEL EDVRGNITKA NEEANLIQAV AESLRTELDK
601: EKASLVTLQQ RESMASITVS SLEAELSRTK QEIEMLYTKE AESRAKMADI PKMLQRAAQE ADDAKVAAHS AREELRKSKE EAEQAKAAAT TAEVRLRAAL
701: KEIEASKASE RLALVAAQAL QESEEATGAE DSPRVTLPVG EYHLLSKRVH EAEELANERV MASLAQIKVA KESESRSLER LLEVSRSMDQ KKDALKIASQ
801: RAAMAEEGKL GAEAQLRKWR SEHKQLRKAH EAAKHAISPL STPFAEYKEA SYQENKAVLT EPKSHMSDNS MDGFASDKKL PKKKKKSLFP QMSTLFSRKV
901: QTQT
001: MDDDHKVSND ISLLPDLNFD SSSPFTSIEF DSSICDLLNL ETGGDTPNLI PDHNPFFDSF DGLQEEEEDS HFVVEPESPK VYIAPRVMIN HQDSFSLDSR
101: NDEYIEDVKI LPGSPGGIQD LGLSRLKVPG SPRAFVHPRS SGSPRFVSPT SPVLIDTAAP FESVKEAVSK FGGITDWKAH KIQTIERRKT VDQELEKIQE
201: DMPDYKKQAV VAEEAKHQVV MELERTRNVV EELKLELEKA EKEEQQAKQD SDLAKLRVEE MEQGIAGEVS VAAKSQLEVA KARHLSAVSE LGTIREEIEM
301: VSNEYESLLT EKDLAAKKAE DSVLKAKDVE KQMEGLTMEV IATKQLLELA HATHLEAQEK KLDAAMARDQ DVYNQEKELK MVEDEIKRFR QDIDAADDVK
401: TKLKTASALQ QDLRAEIAAY KDSNMGKRNN SDIQAAVDSA RKELEEVISN IEKANSEVKT LKIIVGSLQS ELAREKHDLS ETRQRNREDT REEKCTEIAK
501: KLQEASREAE EAKSLAIAAR EELRKAKEES DEAKTGLSAV ERQLMESKKE MEASRASEKL ALAAIKALQE TEYANKIEDI SSSPKSIIIS VEEYYELSKQ
601: AHEVEEAANR KLAEIVSKIE VAKEEESRIL ENLEEVSRET AIRKVELKEA MTKVEKARDG KVGMDHELRK WRSDNGNRSP EGGNKENLSK SKSALHQPTT
701: FTFGEQASSS NVTPQASSSN VTPETETKKK KKRFSLLPKV FMFLSRKKSS NK
101: NDEYIEDVKI LPGSPGGIQD LGLSRLKVPG SPRAFVHPRS SGSPRFVSPT SPVLIDTAAP FESVKEAVSK FGGITDWKAH KIQTIERRKT VDQELEKIQE
201: DMPDYKKQAV VAEEAKHQVV MELERTRNVV EELKLELEKA EKEEQQAKQD SDLAKLRVEE MEQGIAGEVS VAAKSQLEVA KARHLSAVSE LGTIREEIEM
301: VSNEYESLLT EKDLAAKKAE DSVLKAKDVE KQMEGLTMEV IATKQLLELA HATHLEAQEK KLDAAMARDQ DVYNQEKELK MVEDEIKRFR QDIDAADDVK
401: TKLKTASALQ QDLRAEIAAY KDSNMGKRNN SDIQAAVDSA RKELEEVISN IEKANSEVKT LKIIVGSLQS ELAREKHDLS ETRQRNREDT REEKCTEIAK
501: KLQEASREAE EAKSLAIAAR EELRKAKEES DEAKTGLSAV ERQLMESKKE MEASRASEKL ALAAIKALQE TEYANKIEDI SSSPKSIIIS VEEYYELSKQ
601: AHEVEEAANR KLAEIVSKIE VAKEEESRIL ENLEEVSRET AIRKVELKEA MTKVEKARDG KVGMDHELRK WRSDNGNRSP EGGNKENLSK SKSALHQPTT
701: FTFGEQASSS NVTPQASSSN VTPETETKKK KKRFSLLPKV FMFLSRKKSS NK
Arabidopsis Description
Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT1G45545]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.