Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5A01G238500.1 | Wheat | cytosol | 82.62 | 83.67 |
TraesCS5B01G237000.1 | Wheat | cytosol | 82.5 | 83.65 |
TraesCS5D01G245400.1 | Wheat | cytosol | 82.25 | 83.4 |
Zm00001d005893_P001 | Maize | cytosol | 50.12 | 52.76 |
KXG35766 | Sorghum | nucleus | 50.88 | 50.75 |
Zm00001d020719_P002 | Maize | nucleus | 49.38 | 50.19 |
Os09t0458000-00 | Rice | plasma membrane | 49.0 | 46.95 |
HORVU2Hr1G030630.1 | Barley | nucleus | 32.38 | 32.66 |
HORVU4Hr1G089990.4 | Barley | cytosol, nucleus, plastid | 29.12 | 30.54 |
HORVU1Hr1G062330.8 | Barley | nucleus | 30.0 | 26.55 |
HORVU5Hr1G029890.1 | Barley | nucleus | 16.5 | 20.47 |
Protein Annotations
EnsemblPlants:HORVU5Hr1G068440.1 | EnsemblPlantsGene:HORVU5Hr1G068440 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF15 |
PFAM:PF05701 | SEG:seg | UniParc:UPI000294D4BC | UniProt:M0XN35 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr5H:-:517657757..517663665
Molecular Weight (calculated)
89558.5 Da
IEP (calculated)
4.896
GRAVY (calculated)
-0.673
Length
800 amino acids
Sequence
(BLAST)
(BLAST)
001: MEELNAEGVQ QVEELNVEGV QQVEELNVKG AQQVQELNVE GVQQVAVVPN TVDLLENLTD SMPLVSVGFT ESSPDGHNRH LSEDLSSLTI NNIRVNGEES
101: CDNQSKGNGI SFHGHNRNFS EDIGSLTINE LRASKVEEDC HSQHEEKEQQ ISRHNSAERN IFKAAEIAER FIQALDNRVL VETAAPIESV KDAVSKFGGI
201: LDWKERRKNV QLALDKVREE GPEYQRRVNA EELEKSKVLQ ELCSTRRIIE GLKLSLEKAQ TEALQAQQDA ELAEIRYKEI QQGIARKESA AVKAEIDLAK
301: ERHATAVADL QSVKEELEQL EKEHTSLITH REIAEIRAHE STAASQEIEK IVEDLTLELI SLKESLTSSH ATHIIAEERR INVALAYEQE KMDSKNELKQ
401: VDGEIQKLND EILANKDLES KLEAASALLA NLQSDFTAYM EGTLLEKENE VGEEMRSMVD VQMKLAKTRK ELEDMRTNIE TAKDEVKGLW NTAAALRADL
501: EKEKADLTAL KDKVHRATVS ASSFQEELRK TTRELIVVQE RIEAAKMPAE LRQATQETQR AKAKARSACD EVTKAGEEAD RAKAEVNVVQ LRQEAVSREI
601: LAVKASEEIA MASVNALQEY KEEGETEPEA DRRSDKSMMV SLEEYDALNK RAKEAEDLAK KRVIEAVEKI KEAKEGEVRS LDKLYQLTTQ IDERRVALRE
701: AQEKAIAAQD HKLTMENELR KRRVKHGQHY TAGEAELAIP EVCLLRNGAC SFDAAGSSAS HMQGGGGPVT AAAGEPKARK SYFPRSIVTM FMTRKKTHSK
101: CDNQSKGNGI SFHGHNRNFS EDIGSLTINE LRASKVEEDC HSQHEEKEQQ ISRHNSAERN IFKAAEIAER FIQALDNRVL VETAAPIESV KDAVSKFGGI
201: LDWKERRKNV QLALDKVREE GPEYQRRVNA EELEKSKVLQ ELCSTRRIIE GLKLSLEKAQ TEALQAQQDA ELAEIRYKEI QQGIARKESA AVKAEIDLAK
301: ERHATAVADL QSVKEELEQL EKEHTSLITH REIAEIRAHE STAASQEIEK IVEDLTLELI SLKESLTSSH ATHIIAEERR INVALAYEQE KMDSKNELKQ
401: VDGEIQKLND EILANKDLES KLEAASALLA NLQSDFTAYM EGTLLEKENE VGEEMRSMVD VQMKLAKTRK ELEDMRTNIE TAKDEVKGLW NTAAALRADL
501: EKEKADLTAL KDKVHRATVS ASSFQEELRK TTRELIVVQE RIEAAKMPAE LRQATQETQR AKAKARSACD EVTKAGEEAD RAKAEVNVVQ LRQEAVSREI
601: LAVKASEEIA MASVNALQEY KEEGETEPEA DRRSDKSMMV SLEEYDALNK RAKEAEDLAK KRVIEAVEKI KEAKEGEVRS LDKLYQLTTQ IDERRVALRE
701: AQEKAIAAQD HKLTMENELR KRRVKHGQHY TAGEAELAIP EVCLLRNGAC SFDAAGSSAS HMQGGGGPVT AAAGEPKARK SYFPRSIVTM FMTRKKTHSK
001: MDDDHKVSND ISLLPDLNFD SSSPFTSIEF DSSICDLLNL ETGGDTPNLI PDHNPFFDSF DGLQEEEEDS HFVVEPESPK VYIAPRVMIN HQDSFSLDSR
101: NDEYIEDVKI LPGSPGGIQD LGLSRLKVPG SPRAFVHPRS SGSPRFVSPT SPVLIDTAAP FESVKEAVSK FGGITDWKAH KIQTIERRKT VDQELEKIQE
201: DMPDYKKQAV VAEEAKHQVV MELERTRNVV EELKLELEKA EKEEQQAKQD SDLAKLRVEE MEQGIAGEVS VAAKSQLEVA KARHLSAVSE LGTIREEIEM
301: VSNEYESLLT EKDLAAKKAE DSVLKAKDVE KQMEGLTMEV IATKQLLELA HATHLEAQEK KLDAAMARDQ DVYNQEKELK MVEDEIKRFR QDIDAADDVK
401: TKLKTASALQ QDLRAEIAAY KDSNMGKRNN SDIQAAVDSA RKELEEVISN IEKANSEVKT LKIIVGSLQS ELAREKHDLS ETRQRNREDT REEKCTEIAK
501: KLQEASREAE EAKSLAIAAR EELRKAKEES DEAKTGLSAV ERQLMESKKE MEASRASEKL ALAAIKALQE TEYANKIEDI SSSPKSIIIS VEEYYELSKQ
601: AHEVEEAANR KLAEIVSKIE VAKEEESRIL ENLEEVSRET AIRKVELKEA MTKVEKARDG KVGMDHELRK WRSDNGNRSP EGGNKENLSK SKSALHQPTT
701: FTFGEQASSS NVTPQASSSN VTPETETKKK KKRFSLLPKV FMFLSRKKSS NK
101: NDEYIEDVKI LPGSPGGIQD LGLSRLKVPG SPRAFVHPRS SGSPRFVSPT SPVLIDTAAP FESVKEAVSK FGGITDWKAH KIQTIERRKT VDQELEKIQE
201: DMPDYKKQAV VAEEAKHQVV MELERTRNVV EELKLELEKA EKEEQQAKQD SDLAKLRVEE MEQGIAGEVS VAAKSQLEVA KARHLSAVSE LGTIREEIEM
301: VSNEYESLLT EKDLAAKKAE DSVLKAKDVE KQMEGLTMEV IATKQLLELA HATHLEAQEK KLDAAMARDQ DVYNQEKELK MVEDEIKRFR QDIDAADDVK
401: TKLKTASALQ QDLRAEIAAY KDSNMGKRNN SDIQAAVDSA RKELEEVISN IEKANSEVKT LKIIVGSLQS ELAREKHDLS ETRQRNREDT REEKCTEIAK
501: KLQEASREAE EAKSLAIAAR EELRKAKEES DEAKTGLSAV ERQLMESKKE MEASRASEKL ALAAIKALQE TEYANKIEDI SSSPKSIIIS VEEYYELSKQ
601: AHEVEEAANR KLAEIVSKIE VAKEEESRIL ENLEEVSRET AIRKVELKEA MTKVEKARDG KVGMDHELRK WRSDNGNRSP EGGNKENLSK SKSALHQPTT
701: FTFGEQASSS NVTPQASSSN VTPETETKKK KKRFSLLPKV FMFLSRKKSS NK
Arabidopsis Description
Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT1G45545]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.