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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G238500.1 Wheat cytosol 82.62 83.67
TraesCS5B01G237000.1 Wheat cytosol 82.5 83.65
TraesCS5D01G245400.1 Wheat cytosol 82.25 83.4
Zm00001d005893_P001 Maize cytosol 50.12 52.76
KXG35766 Sorghum nucleus 50.88 50.75
Zm00001d020719_P002 Maize nucleus 49.38 50.19
Os09t0458000-00 Rice plasma membrane 49.0 46.95
HORVU2Hr1G030630.1 Barley nucleus 32.38 32.66
HORVU4Hr1G089990.4 Barley cytosol, nucleus, plastid 29.12 30.54
HORVU1Hr1G062330.8 Barley nucleus 30.0 26.55
HORVU5Hr1G029890.1 Barley nucleus 16.5 20.47
Protein Annotations
EnsemblPlants:HORVU5Hr1G068440.1EnsemblPlantsGene:HORVU5Hr1G068440InterPro:Webncoils:CoilPANTHER:PTHR32054PANTHER:PTHR32054:SF15
PFAM:PF05701SEG:segUniParc:UPI000294D4BCUniProt:M0XN35MapMan:35.1:
Description
No Description!
Coordinates
chrchr5H:-:517657757..517663665
Molecular Weight (calculated)
89558.5 Da
IEP (calculated)
4.896
GRAVY (calculated)
-0.673
Length
800 amino acids
Sequence
(BLAST)
001: MEELNAEGVQ QVEELNVEGV QQVEELNVKG AQQVQELNVE GVQQVAVVPN TVDLLENLTD SMPLVSVGFT ESSPDGHNRH LSEDLSSLTI NNIRVNGEES
101: CDNQSKGNGI SFHGHNRNFS EDIGSLTINE LRASKVEEDC HSQHEEKEQQ ISRHNSAERN IFKAAEIAER FIQALDNRVL VETAAPIESV KDAVSKFGGI
201: LDWKERRKNV QLALDKVREE GPEYQRRVNA EELEKSKVLQ ELCSTRRIIE GLKLSLEKAQ TEALQAQQDA ELAEIRYKEI QQGIARKESA AVKAEIDLAK
301: ERHATAVADL QSVKEELEQL EKEHTSLITH REIAEIRAHE STAASQEIEK IVEDLTLELI SLKESLTSSH ATHIIAEERR INVALAYEQE KMDSKNELKQ
401: VDGEIQKLND EILANKDLES KLEAASALLA NLQSDFTAYM EGTLLEKENE VGEEMRSMVD VQMKLAKTRK ELEDMRTNIE TAKDEVKGLW NTAAALRADL
501: EKEKADLTAL KDKVHRATVS ASSFQEELRK TTRELIVVQE RIEAAKMPAE LRQATQETQR AKAKARSACD EVTKAGEEAD RAKAEVNVVQ LRQEAVSREI
601: LAVKASEEIA MASVNALQEY KEEGETEPEA DRRSDKSMMV SLEEYDALNK RAKEAEDLAK KRVIEAVEKI KEAKEGEVRS LDKLYQLTTQ IDERRVALRE
701: AQEKAIAAQD HKLTMENELR KRRVKHGQHY TAGEAELAIP EVCLLRNGAC SFDAAGSSAS HMQGGGGPVT AAAGEPKARK SYFPRSIVTM FMTRKKTHSK
Best Arabidopsis Sequence Match ( AT1G45545.1 )
(BLAST)
001: MDDDHKVSND ISLLPDLNFD SSSPFTSIEF DSSICDLLNL ETGGDTPNLI PDHNPFFDSF DGLQEEEEDS HFVVEPESPK VYIAPRVMIN HQDSFSLDSR
101: NDEYIEDVKI LPGSPGGIQD LGLSRLKVPG SPRAFVHPRS SGSPRFVSPT SPVLIDTAAP FESVKEAVSK FGGITDWKAH KIQTIERRKT VDQELEKIQE
201: DMPDYKKQAV VAEEAKHQVV MELERTRNVV EELKLELEKA EKEEQQAKQD SDLAKLRVEE MEQGIAGEVS VAAKSQLEVA KARHLSAVSE LGTIREEIEM
301: VSNEYESLLT EKDLAAKKAE DSVLKAKDVE KQMEGLTMEV IATKQLLELA HATHLEAQEK KLDAAMARDQ DVYNQEKELK MVEDEIKRFR QDIDAADDVK
401: TKLKTASALQ QDLRAEIAAY KDSNMGKRNN SDIQAAVDSA RKELEEVISN IEKANSEVKT LKIIVGSLQS ELAREKHDLS ETRQRNREDT REEKCTEIAK
501: KLQEASREAE EAKSLAIAAR EELRKAKEES DEAKTGLSAV ERQLMESKKE MEASRASEKL ALAAIKALQE TEYANKIEDI SSSPKSIIIS VEEYYELSKQ
601: AHEVEEAANR KLAEIVSKIE VAKEEESRIL ENLEEVSRET AIRKVELKEA MTKVEKARDG KVGMDHELRK WRSDNGNRSP EGGNKENLSK SKSALHQPTT
701: FTFGEQASSS NVTPQASSSN VTPETETKKK KKRFSLLPKV FMFLSRKKSS NK
Arabidopsis Description
Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT1G45545]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.