Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G126800.1 | Wheat | cytosol | 65.01 | 71.37 |
| TraesCS4B01G386100.1 | Wheat | nucleus | 59.37 | 67.01 |
| Zm00001d027322_P001 | Maize | cytosol | 47.31 | 51.28 |
| Zm00001d048523_P001 | Maize | nucleus | 40.5 | 49.52 |
| OQU93419 | Sorghum | cytosol | 43.38 | 48.53 |
| HORVU5Hr1G068440.1 | Barley | cytosol | 30.54 | 29.12 |
| HORVU2Hr1G030630.1 | Barley | nucleus | 28.05 | 26.99 |
| HORVU1Hr1G062330.8 | Barley | nucleus | 27.26 | 23.01 |
| HORVU5Hr1G029890.1 | Barley | nucleus | 17.56 | 20.78 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G089990.4 | EnsemblPlantsGene:HORVU4Hr1G089990 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF6 |
| PFAM:PF05701 | SEG:seg | UniParc:UPI000B480229 | UniProt:A0A287Q3T4 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr4H:-:644043699..644046293
Molecular Weight (calculated)
83273.7 Da
IEP (calculated)
4.894
GRAVY (calculated)
-0.744
Length
763 amino acids
Sequence
(BLAST)
(BLAST)
001: PSHPQRPDRS GGAYPSPVHV LDSSIGTIKA AIQEPGSVGA VRRCFLDVLH LCCGMEEASM EGPATSSSRP APAPASMSHA SSEDADFFDT HHQDDDDDDD
101: DDDGEHGPGT YMASDIADRF VRVIDGKAHR VDTAAPIDSV RGAVSKFGGI LDWRERRQQV EEELGGVQAE AAEYQRRTRE ADAGRAEAQQ DLMGATGEID
201: DLWLTVKRAQ IAEAQARKDS ELAKLRLRKL EKGARERAAA KAELESLRDR HAAALADLRA TRAELGTLKK ERDAVAEEAS AAAARVRVTA GEAVQVGEAL
301: REATAELDVL MAELESARAT HDTAEERRMR LALAWREEKL RLQNELEQGE MEVRRLRDEL VAAGDLQSKV SAASEHLANL RAELFARAVE GASEEEDKQT
401: PTARSTPVML DSAKKELEEV KGNVEKAKDE AKILHVAAAS LRADLEREKA ELDSLRRKQS TSSSASISSL EEELRRVTTE LAAAQARARD SGEEKKKTTP
501: EQLDEARREA EQAKASARAT QEEVAAARED ARVARAAVQA TEARLEAVMR EMLAAKASAE TAAASADALL QQQDTTRSAQ SQGGAVPEDC VALTTEEYEE
601: LSRRARETEE AAGERVDEAV MHIKEAKDAE TRCQERLAQL ERETEQRRQA LRAATEEAEQ AESGKLAAER ELRQLQAEQH RRAGSGGEKA SPRTGLAEIS
701: AFEGGGDARG NPHILSPRVG YMPRADMAAM SAAEEADARQ RKPFFPRMVM FLAKKRAQTW NGK
101: DDDGEHGPGT YMASDIADRF VRVIDGKAHR VDTAAPIDSV RGAVSKFGGI LDWRERRQQV EEELGGVQAE AAEYQRRTRE ADAGRAEAQQ DLMGATGEID
201: DLWLTVKRAQ IAEAQARKDS ELAKLRLRKL EKGARERAAA KAELESLRDR HAAALADLRA TRAELGTLKK ERDAVAEEAS AAAARVRVTA GEAVQVGEAL
301: REATAELDVL MAELESARAT HDTAEERRMR LALAWREEKL RLQNELEQGE MEVRRLRDEL VAAGDLQSKV SAASEHLANL RAELFARAVE GASEEEDKQT
401: PTARSTPVML DSAKKELEEV KGNVEKAKDE AKILHVAAAS LRADLEREKA ELDSLRRKQS TSSSASISSL EEELRRVTTE LAAAQARARD SGEEKKKTTP
501: EQLDEARREA EQAKASARAT QEEVAAARED ARVARAAVQA TEARLEAVMR EMLAAKASAE TAAASADALL QQQDTTRSAQ SQGGAVPEDC VALTTEEYEE
601: LSRRARETEE AAGERVDEAV MHIKEAKDAE TRCQERLAQL ERETEQRRQA LRAATEEAEQ AESGKLAAER ELRQLQAEQH RRAGSGGEKA SPRTGLAEIS
701: AFEGGGDARG NPHILSPRVG YMPRADMAAM SAAEEADARQ RKPFFPRMVM FLAKKRAQTW NGK
001: MMDDDHKVSN DISLLPDLNF DSSSPFTSIE FDSSICDLLN LETGGDTPNL IPDHNPFFDS FDGLQEEEED SHFVVEPESP KVYIAPRVMI NHQDSFSLDS
101: RNDEYIEDVK ILPGSPGGIQ DLGLSRLKVP GSPRAFVHPR SSGSPRFVSP TSPVLIDTAA PFESVKEAVS KFGGITDWKA HKIQTIERRK TVDQELEKIQ
201: EDMPDYKKQA VVAEEAKHQV VMELERTRNV VEELKLELEK AEKEEQQAKQ DSDLAKLRVE EMEQGIAGEV SVAAKSQLEV AKARHLSAVS ELGTIREEIE
301: MVSNEYESLL TEKDLAAKKA EDSVLKAKDV EKQMEGLTME VIATKQLLEL AHATHLEAQE KKLDAAMARD QDVYNQEKEL KMVEDEIKRF RQDIDAADDV
401: KTKLKTASAL QQDLRAEIAA YKDSNMGKRN NSDIQAAVDS ARKELEEVIS NIEKANSEVK TLKIIVGSLQ SELAREKHDL SETRQRNRED TREEKCTEIA
501: KKLQEASREA EEAKSLAIAA REELRKAKEE SDEAKTGLSA VERQLMESKK EMEASRASEK LALAAIKALQ ETEYANKIED ISSSPKSIII SVEEYYELSK
601: QAHEVEEAAN RKLAEIVSKI EVAKEEESRI LENLEEVSRE TAIRKVELKE AMTKVEKARD GKVGMDHELR KWRSDNGNRS PEGGNKENLS KSKSALHQPT
701: TFTFGEQASS SNVTPQASSS NVTPETETKK KKKRFSLLPK VFMFLSRKKS SNK
101: RNDEYIEDVK ILPGSPGGIQ DLGLSRLKVP GSPRAFVHPR SSGSPRFVSP TSPVLIDTAA PFESVKEAVS KFGGITDWKA HKIQTIERRK TVDQELEKIQ
201: EDMPDYKKQA VVAEEAKHQV VMELERTRNV VEELKLELEK AEKEEQQAKQ DSDLAKLRVE EMEQGIAGEV SVAAKSQLEV AKARHLSAVS ELGTIREEIE
301: MVSNEYESLL TEKDLAAKKA EDSVLKAKDV EKQMEGLTME VIATKQLLEL AHATHLEAQE KKLDAAMARD QDVYNQEKEL KMVEDEIKRF RQDIDAADDV
401: KTKLKTASAL QQDLRAEIAA YKDSNMGKRN NSDIQAAVDS ARKELEEVIS NIEKANSEVK TLKIIVGSLQ SELAREKHDL SETRQRNRED TREEKCTEIA
501: KKLQEASREA EEAKSLAIAA REELRKAKEE SDEAKTGLSA VERQLMESKK EMEASRASEK LALAAIKALQ ETEYANKIED ISSSPKSIII SVEEYYELSK
601: QAHEVEEAAN RKLAEIVSKI EVAKEEESRI LENLEEVSRE TAIRKVELKE AMTKVEKARD GKVGMDHELR KWRSDNGNRS PEGGNKENLS KSKSALHQPT
701: TFTFGEQASS SNVTPQASSS NVTPETETKK KKKRFSLLPK VFMFLSRKKS SNK
Arabidopsis Description
Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT1G45545]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.