Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G126800.1 | Wheat | cytosol | 75.74 | 73.67 |
| HORVU4Hr1G089990.4 | Barley | cytosol, nucleus, plastid | 67.01 | 59.37 |
| OQU93419 | Sorghum | cytosol | 46.75 | 46.33 |
| Zm00001d048523_P001 | Maize | nucleus | 42.01 | 45.51 |
| Zm00001d027322_P001 | Maize | cytosol | 44.82 | 43.04 |
| TraesCS5B01G237000.1 | Wheat | cytosol | 32.99 | 28.26 |
| TraesCS1B01G259500.1 | Wheat | nucleus | 26.04 | 23.04 |
| TraesCS2B01G192300.1 | Wheat | nucleus | 27.81 | 22.35 |
| TraesCS4B01G127500.1 | Wheat | nucleus | 20.71 | 22.08 |
| TraesCS5B01G103500.1 | Wheat | nucleus | 20.86 | 22.07 |
| TraesCS4B01G300400.1 | Wheat | nucleus | 22.04 | 17.23 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G386100.1 | EnsemblPlantsGene:TraesCS4B01G386100 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF6 |
| PFAM:PF05701 | SEG:seg | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr4B:+:664778050..664780174
Molecular Weight (calculated)
73256.9 Da
IEP (calculated)
4.938
GRAVY (calculated)
-0.710
Length
676 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEASSSMEG ASGGHPASVS RASSEDADFF DTHRQEDDDD ADGAYTASDI AERFVRVIDG KVHVDDADPV RGAVSKFGGI LDWRERRQQA EQELGVVHAE
101: AAEYQRRIRE ADAGRADAQQ DLMGATGEID DLWLTVKRAQ IAEAQARKDS ELAKLRLRKL EKSARERAAA KAELDSVRGR HATALADLRA ARAEMDALRK
201: EREAVAEEAS AAAARVRDTA GEAVRAGEAL REAAGEFEVL RAELESARAA HDAAEEKRMR LALAWREDKV RWQNQLEEAE KEVRRVRDDL AAAGDLESQV
301: AAASEHLATL RAELFARAVQ GASEEEEEDK QTSAASSTPA MVDKAKKELE EAMASVGKAK DEGKILHVAA ASLRADLEKE KAELAALRQK QSTSSSASIP
401: SLEEELRRVT SELAAAQARA RERDEAKKAT PEQLDEARRE AERAKASARA TQEEVAAARE DARVTRAAVQ ATEARLEAVL REALAAKASA EAAAASADAL
501: QQAQVPEDCV ALSTEEYEEL SRRARGTEEA GGERVAEALR QVKEAQEAEA RGQQKLAKLG RDTELRRQTL RAATEECEQA ESAKVAAERA LQAELRRRAG
601: SETASPPRAG LAEISTLEGG DGRGGNPHIL SPRAGYMPRA DAAAMAAADE AGQKKPFFPR MVMFLAKKRA QTWNAK
101: AAEYQRRIRE ADAGRADAQQ DLMGATGEID DLWLTVKRAQ IAEAQARKDS ELAKLRLRKL EKSARERAAA KAELDSVRGR HATALADLRA ARAEMDALRK
201: EREAVAEEAS AAAARVRDTA GEAVRAGEAL REAAGEFEVL RAELESARAA HDAAEEKRMR LALAWREDKV RWQNQLEEAE KEVRRVRDDL AAAGDLESQV
301: AAASEHLATL RAELFARAVQ GASEEEEEDK QTSAASSTPA MVDKAKKELE EAMASVGKAK DEGKILHVAA ASLRADLEKE KAELAALRQK QSTSSSASIP
401: SLEEELRRVT SELAAAQARA RERDEAKKAT PEQLDEARRE AERAKASARA TQEEVAAARE DARVTRAAVQ ATEARLEAVL REALAAKASA EAAAASADAL
501: QQAQVPEDCV ALSTEEYEEL SRRARGTEEA GGERVAEALR QVKEAQEAEA RGQQKLAKLG RDTELRRQTL RAATEECEQA ESAKVAAERA LQAELRRRAG
601: SETASPPRAG LAEISTLEGG DGRGGNPHIL SPRAGYMPRA DAAAMAAADE AGQKKPFFPR MVMFLAKKRA QTWNAK
001: MDDDHKVSND ISLLPDLNFD SSSPFTSIEF DSSICDLLNL ETGGDTPNLI PDHNPFFDSF DGLQEEEEDS HFVVEPESPK VYIAPRVMIN HQDSFSLDSR
101: NDEYIEDVKI LPGSPGGIQD LGLSRLKVPG SPRAFVHPRS SGSPRFVSPT SPVLIDTAAP FESVKEAVSK FGGITDWKAH KIQTIERRKT VDQELEKIQE
201: DMPDYKKQAV VAEEAKHQVV MELERTRNVV EELKLELEKA EKEEQQAKQD SDLAKLRVEE MEQGIAGEVS VAAKSQLEVA KARHLSAVSE LGTIREEIEM
301: VSNEYESLLT EKDLAAKKAE DSVLKAKDVE KQMEGLTMEV IATKQLLELA HATHLEAQEK KLDAAMARDQ DVYNQEKELK MVEDEIKRFR QDIDAADDVK
401: TKLKTASALQ QDLRAEIAAY KDSNMGKRNN SDIQAAVDSA RKELEEVISN IEKANSEVKT LKIIVGSLQS ELAREKHDLS ETRQRNREDT REEKCTEIAK
501: KLQEASREAE EAKSLAIAAR EELRKAKEES DEAKTGLSAV ERQLMESKKE MEASRASEKL ALAAIKALQE TEYANKIEDI SSSPKSIIIS VEEYYELSKQ
601: AHEVEEAANR KLAEIVSKIE VAKEEESRIL ENLEEVSRET AIRKVELKEA MTKVEKARDG KVGMDHELRK WRSDNGNRSP EGGNKENLSK SKSALHQPTT
701: FTFGEQASSS NVTPQASSSN VTPETETKKK KKRFSLLPKV FMFLSRKKSS NK
101: NDEYIEDVKI LPGSPGGIQD LGLSRLKVPG SPRAFVHPRS SGSPRFVSPT SPVLIDTAAP FESVKEAVSK FGGITDWKAH KIQTIERRKT VDQELEKIQE
201: DMPDYKKQAV VAEEAKHQVV MELERTRNVV EELKLELEKA EKEEQQAKQD SDLAKLRVEE MEQGIAGEVS VAAKSQLEVA KARHLSAVSE LGTIREEIEM
301: VSNEYESLLT EKDLAAKKAE DSVLKAKDVE KQMEGLTMEV IATKQLLELA HATHLEAQEK KLDAAMARDQ DVYNQEKELK MVEDEIKRFR QDIDAADDVK
401: TKLKTASALQ QDLRAEIAAY KDSNMGKRNN SDIQAAVDSA RKELEEVISN IEKANSEVKT LKIIVGSLQS ELAREKHDLS ETRQRNREDT REEKCTEIAK
501: KLQEASREAE EAKSLAIAAR EELRKAKEES DEAKTGLSAV ERQLMESKKE MEASRASEKL ALAAIKALQE TEYANKIEDI SSSPKSIIIS VEEYYELSKQ
601: AHEVEEAANR KLAEIVSKIE VAKEEESRIL ENLEEVSRET AIRKVELKEA MTKVEKARDG KVGMDHELRK WRSDNGNRSP EGGNKENLSK SKSALHQPTT
701: FTFGEQASSS NVTPQASSSN VTPETETKKK KKRFSLLPKV FMFLSRKKSS NK
Arabidopsis Description
Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT1G45545]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.