Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G238500.1 | Wheat | cytosol | 92.14 | 92.03 |
| TraesCS5D01G245400.1 | Wheat | cytosol | 90.49 | 90.49 |
| HORVU5Hr1G068440.1 | Barley | cytosol | 83.65 | 82.5 |
| Zm00001d005893_P001 | Maize | cytosol | 49.18 | 51.05 |
| Zm00001d020719_P002 | Maize | nucleus | 49.18 | 49.3 |
| KXG35766 | Sorghum | nucleus | 49.18 | 48.38 |
| Os09t0458000-00 | Rice | plasma membrane | 49.05 | 46.35 |
| TraesCS4B01G386100.1 | Wheat | nucleus | 28.26 | 32.99 |
| TraesCS1B01G259500.1 | Wheat | nucleus | 30.67 | 31.68 |
| TraesCS2B01G192300.1 | Wheat | nucleus | 32.95 | 30.92 |
| TraesCS4B01G300400.1 | Wheat | nucleus | 24.21 | 22.08 |
| TraesCS4B01G127500.1 | Wheat | nucleus | 17.36 | 21.61 |
| TraesCS5B01G103500.1 | Wheat | nucleus | 16.98 | 20.97 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G237000.1 | EnsemblPlantsGene:TraesCS5B01G237000 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF15 |
| PFAM:PF05701 | SEG:seg | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5B:+:418009365..418011821
Molecular Weight (calculated)
88171.9 Da
IEP (calculated)
5.334
GRAVY (calculated)
-0.714
Length
789 amino acids
Sequence
(BLAST)
(BLAST)
001: MEELNVEGVQ QVEELNVKGV QQEEELNVKG VHQVAVVPNT VDSLENLTDS KPLVSVGFTE SSPDGHNRHL SEDLSSLTIN NIRVNGEEIC HNQSKGNGHN
101: RNFSEDIGSL TINECRANKV EENCHNQPEV KEQQQISRHN SAERNIFKAA EIAERFIQAL DNRVLVETAA PIESVKDAVS KFGGILDWKE RRKNVQLKLD
201: KVREEGPEYQ RRFIAEEVEK SKVLQELCST RRIIEGLKLS LEKAQTEALQ AQQDAELAEI RCKEIQQGIA RKESAAVKAE IVLAKERHAT ALADLKSVKE
301: ELEQLEKEHA ALITHRENAE IRAHESTAAS QEIEKIVEDL TLELISLKES LTSSHATHII AEERRINVAL AYEQEKLDSQ NELKQAEEEI QKLNGDISAN
401: KDLESKLEAA SALLANLQRD FTAYMEGILP EKEGEVGEEV RSMVGVQMKL ATTRKELEDM RTNIETAKDE VKGLWNTAAA LRADLEKEKA DLTALKDKVH
501: HATVSVSSLQ EELRKTAREL SVVQQRTEAA KMPIELQQAT QETQRAKAKA RSACDEVTKA SEEADRAKAD VNIVQLKQEA VSREILAVKA SEEIAMASAN
601: ALQEYKEEGE IDPQADRRSD KSMMVPLEDY DALNKRAKEA EDRAKKRVME AVEKIKEAKE GEVRSLDKLH QLAKQIDERR EALREAHEKS ITAQEKKLTM
701: ESELRKRRAK HGQHYTAGDA DLAIPDVCLL NSACSFDAAG SSASHMQGGG TARADTTTTS AATEPKARKS FFPRSIATMF MNRKKAHSK
101: RNFSEDIGSL TINECRANKV EENCHNQPEV KEQQQISRHN SAERNIFKAA EIAERFIQAL DNRVLVETAA PIESVKDAVS KFGGILDWKE RRKNVQLKLD
201: KVREEGPEYQ RRFIAEEVEK SKVLQELCST RRIIEGLKLS LEKAQTEALQ AQQDAELAEI RCKEIQQGIA RKESAAVKAE IVLAKERHAT ALADLKSVKE
301: ELEQLEKEHA ALITHRENAE IRAHESTAAS QEIEKIVEDL TLELISLKES LTSSHATHII AEERRINVAL AYEQEKLDSQ NELKQAEEEI QKLNGDISAN
401: KDLESKLEAA SALLANLQRD FTAYMEGILP EKEGEVGEEV RSMVGVQMKL ATTRKELEDM RTNIETAKDE VKGLWNTAAA LRADLEKEKA DLTALKDKVH
501: HATVSVSSLQ EELRKTAREL SVVQQRTEAA KMPIELQQAT QETQRAKAKA RSACDEVTKA SEEADRAKAD VNIVQLKQEA VSREILAVKA SEEIAMASAN
601: ALQEYKEEGE IDPQADRRSD KSMMVPLEDY DALNKRAKEA EDRAKKRVME AVEKIKEAKE GEVRSLDKLH QLAKQIDERR EALREAHEKS ITAQEKKLTM
701: ESELRKRRAK HGQHYTAGDA DLAIPDVCLL NSACSFDAAG SSASHMQGGG TARADTTTTS AATEPKARKS FFPRSIATMF MNRKKAHSK
001: MDDDHKVSND ISLLPDLNFD SSSPFTSIEF DSSICDLLNL ETGGDTPNLI PDHNPFFDSF DGLQEEEEDS HFVVEPESPK VYIAPRVMIN HQDSFSLDSR
101: NDEYIEDVKI LPGSPGGIQD LGLSRLKVPG SPRAFVHPRS SGSPRFVSPT SPVLIDTAAP FESVKEAVSK FGGITDWKAH KIQTIERRKT VDQELEKIQE
201: DMPDYKKQAV VAEEAKHQVV MELERTRNVV EELKLELEKA EKEEQQAKQD SDLAKLRVEE MEQGIAGEVS VAAKSQLEVA KARHLSAVSE LGTIREEIEM
301: VSNEYESLLT EKDLAAKKAE DSVLKAKDVE KQMEGLTMEV IATKQLLELA HATHLEAQEK KLDAAMARDQ DVYNQEKELK MVEDEIKRFR QDIDAADDVK
401: TKLKTASALQ QDLRAEIAAY KDSNMGKRNN SDIQAAVDSA RKELEEVISN IEKANSEVKT LKIIVGSLQS ELAREKHDLS ETRQRNREDT REEKCTEIAK
501: KLQEASREAE EAKSLAIAAR EELRKAKEES DEAKTGLSAV ERQLMESKKE MEASRASEKL ALAAIKALQE TEYANKIEDI SSSPKSIIIS VEEYYELSKQ
601: AHEVEEAANR KLAEIVSKIE VAKEEESRIL ENLEEVSRET AIRKVELKEA MTKVEKARDG KVGMDHELRK WRSDNGNRSP EGGNKENLSK SKSALHQPTT
701: FTFGEQASSS NVTPQASSSN VTPETETKKK KKRFSLLPKV FMFLSRKKSS NK
101: NDEYIEDVKI LPGSPGGIQD LGLSRLKVPG SPRAFVHPRS SGSPRFVSPT SPVLIDTAAP FESVKEAVSK FGGITDWKAH KIQTIERRKT VDQELEKIQE
201: DMPDYKKQAV VAEEAKHQVV MELERTRNVV EELKLELEKA EKEEQQAKQD SDLAKLRVEE MEQGIAGEVS VAAKSQLEVA KARHLSAVSE LGTIREEIEM
301: VSNEYESLLT EKDLAAKKAE DSVLKAKDVE KQMEGLTMEV IATKQLLELA HATHLEAQEK KLDAAMARDQ DVYNQEKELK MVEDEIKRFR QDIDAADDVK
401: TKLKTASALQ QDLRAEIAAY KDSNMGKRNN SDIQAAVDSA RKELEEVISN IEKANSEVKT LKIIVGSLQS ELAREKHDLS ETRQRNREDT REEKCTEIAK
501: KLQEASREAE EAKSLAIAAR EELRKAKEES DEAKTGLSAV ERQLMESKKE MEASRASEKL ALAAIKALQE TEYANKIEDI SSSPKSIIIS VEEYYELSKQ
601: AHEVEEAANR KLAEIVSKIE VAKEEESRIL ENLEEVSRET AIRKVELKEA MTKVEKARDG KVGMDHELRK WRSDNGNRSP EGGNKENLSK SKSALHQPTT
701: FTFGEQASSS NVTPQASSSN VTPETETKKK KKRFSLLPKV FMFLSRKKSS NK
Arabidopsis Description
Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT1G45545]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.