Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d005893_P001 | Maize | cytosol | 68.2 | 71.97 |
| Zm00001d020719_P002 | Maize | nucleus | 67.71 | 69.0 |
| HORVU5Hr1G068440.1 | Barley | cytosol | 50.75 | 50.88 |
| TraesCS5D01G245400.1 | Wheat | cytosol | 49.13 | 49.94 |
| TraesCS5A01G238500.1 | Wheat | cytosol | 48.63 | 49.37 |
| TraesCS5B01G237000.1 | Wheat | cytosol | 48.38 | 49.18 |
| Os09t0458000-00 | Rice | plasma membrane | 49.63 | 47.66 |
| OQU93419 | Sorghum | cytosol | 27.31 | 32.11 |
| KXG36701 | Sorghum | nucleus | 30.3 | 29.45 |
| EER92167 | Sorghum | nucleus | 27.81 | 28.44 |
| OQU79020 | Sorghum | nucleus | 17.46 | 21.51 |
Protein Annotations
| EnsemblPlants:KXG35766 | EnsemblPlantsGene:SORBI_3002G225800 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF15 |
| PFAM:PF05701 | ProteinID:KXG35766 | ProteinID:KXG35766.1 | SEG:seg | SUPFAM:SSF57997 | UniParc:UPI00081AB318 |
| UniProt:A0A1B6QCW4 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:61790109..61796064
Molecular Weight (calculated)
90450.8 Da
IEP (calculated)
5.450
GRAVY (calculated)
-0.670
Length
802 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEVNVENVP QLYVPSESIN LVESLIDSEP PVSCRMNEVN VENVPQISVL SESIDLVASL IDSEPPASFD YTKSAPAIHS RHLSEDLSAL SINDLRLNNG
101: EQNCNNQIER KGISSHSRHF SEDLSHLAVN DLYANKGEEN VHYLGERKVE SRPNSAERNI YKAAEIAERF IQSIDNRVLV DTGAPIESVK EAVSKFGGIL
201: DWKERRKNVQ NELDKALEDA PKYKRRAEVA EVEKNKVVME LCTTRRTIEG LKLNLEKTQT EAIQAQQDSE LADIRFKEIQ QGIACRESAA ARAEIELARY
301: RYASALTELH LVKDEIQQLQ KEYTSLNTKR DNAETKACES SVASQKIEKT VDDLTLEIIR LKELLTSSQA THIIAEEQKL NVTLAYQQEK ENWQNELRQV
401: DEEVQSMRDA ASVNKDLESK LKVASTLLVK LQDEFSSYLK GECSQEVSVD GDVEIPMVIT KMKLANARKE LEDMKADIKK AKDEARILWN AAATLRAEIE
501: REEADLLALK HKEHLASLSV SSFQQEQSNM TYELNIVHER TKASKMPTEL QQATEEVEQA QAKAQMARYE AAKAREEADQ VKAQFNVIKL RLEAALQEIL
601: AMNASKEIAT ASANALQEYK DEAQIEPQDE RISNNYMTLS LEEYDALSKK AQDAEGLAKK RVIKAVEKIK EAKDAEVRSL NQLEQSTKKI YERKLELRAA
701: QEKANAAQYG KLTMENELRK RRAKHEQQRK VGESSHAISD IPNLKSTSLS FDAASSTSNP HMVGTLSRAD TIGATRVKEP KTRKSLFPRS LVAMFASRKK
801: TH
101: EQNCNNQIER KGISSHSRHF SEDLSHLAVN DLYANKGEEN VHYLGERKVE SRPNSAERNI YKAAEIAERF IQSIDNRVLV DTGAPIESVK EAVSKFGGIL
201: DWKERRKNVQ NELDKALEDA PKYKRRAEVA EVEKNKVVME LCTTRRTIEG LKLNLEKTQT EAIQAQQDSE LADIRFKEIQ QGIACRESAA ARAEIELARY
301: RYASALTELH LVKDEIQQLQ KEYTSLNTKR DNAETKACES SVASQKIEKT VDDLTLEIIR LKELLTSSQA THIIAEEQKL NVTLAYQQEK ENWQNELRQV
401: DEEVQSMRDA ASVNKDLESK LKVASTLLVK LQDEFSSYLK GECSQEVSVD GDVEIPMVIT KMKLANARKE LEDMKADIKK AKDEARILWN AAATLRAEIE
501: REEADLLALK HKEHLASLSV SSFQQEQSNM TYELNIVHER TKASKMPTEL QQATEEVEQA QAKAQMARYE AAKAREEADQ VKAQFNVIKL RLEAALQEIL
601: AMNASKEIAT ASANALQEYK DEAQIEPQDE RISNNYMTLS LEEYDALSKK AQDAEGLAKK RVIKAVEKIK EAKDAEVRSL NQLEQSTKKI YERKLELRAA
701: QEKANAAQYG KLTMENELRK RRAKHEQQRK VGESSHAISD IPNLKSTSLS FDAASSTSNP HMVGTLSRAD TIGATRVKEP KTRKSLFPRS LVAMFASRKK
801: TH
001: MEDLKTVEAS DNVVSDNVEK VNPELIDSTI RESNIQSATK VDNIPQSQTD TEETQQSQTD TEETQQSQTD DTTGNAKIYV DDTFSPSDAA TAAVLTGKDS
101: TSTTIVEEVM EPDEIGLPSV KITEAATGTA RNGGGSPRTV SSPRFSGSPV STGTPKNVDS HRGLIDTAAP FESVKEAVSK FGGITDWKSH RMQAVERRKL
201: IEEELKKIHE EIPEYKTHSE TAEAAKLQVL KELESTKRLI EQLKLNLDKA QTEEQQAKQD SELAKLRVEE MEQGIAEDVS VAAKAQLEVA KARHTTAITE
301: LSSVKEELET LHKEYDALVQ DKDVAVKKVE EAMLASKEVE KTVEELTIEL IATKESLESA HASHLEAEEQ RIGAAMARDQ DTHRWEKELK QAEEELQRLN
401: QQIHSSKDLK SKLDTASALL LDLKAELVAY MESKLKQEAC DSTTNTDPST ENMSHPDLHA AVASAKKELE EVNVNIEKAA AEVSCLKLAS SSLQLELEKE
501: KSTLASIKQR EGMASIAVAS IEAEIDRTRS EIASVQSKEK DAREKMVELP KQLQQAAEEA DEAKSLAEVA REELRKAKEE AEQAKAGAST MESRLFAAQK
601: EIEAAKASER LALAAIKALE ESESTLKAND TDSPRSVTLS LEEYYELSKR AHEAEELANA RVAAAVSRIE EAKETEMRSL EKLEEVNRDM DARKKALKEA
701: TEKAEKAKEG KLGVEQELRK WRAEHEQKRK AGDGVNTEKN LKESFEGGKM EQSPEAVVYA SSPSESYGTE ENSETNLSPQ TKSRKKKKKL SFPRFFMFLS
801: KKKSHNN
101: TSTTIVEEVM EPDEIGLPSV KITEAATGTA RNGGGSPRTV SSPRFSGSPV STGTPKNVDS HRGLIDTAAP FESVKEAVSK FGGITDWKSH RMQAVERRKL
201: IEEELKKIHE EIPEYKTHSE TAEAAKLQVL KELESTKRLI EQLKLNLDKA QTEEQQAKQD SELAKLRVEE MEQGIAEDVS VAAKAQLEVA KARHTTAITE
301: LSSVKEELET LHKEYDALVQ DKDVAVKKVE EAMLASKEVE KTVEELTIEL IATKESLESA HASHLEAEEQ RIGAAMARDQ DTHRWEKELK QAEEELQRLN
401: QQIHSSKDLK SKLDTASALL LDLKAELVAY MESKLKQEAC DSTTNTDPST ENMSHPDLHA AVASAKKELE EVNVNIEKAA AEVSCLKLAS SSLQLELEKE
501: KSTLASIKQR EGMASIAVAS IEAEIDRTRS EIASVQSKEK DAREKMVELP KQLQQAAEEA DEAKSLAEVA REELRKAKEE AEQAKAGAST MESRLFAAQK
601: EIEAAKASER LALAAIKALE ESESTLKAND TDSPRSVTLS LEEYYELSKR AHEAEELANA RVAAAVSRIE EAKETEMRSL EKLEEVNRDM DARKKALKEA
701: TEKAEKAKEG KLGVEQELRK WRAEHEQKRK AGDGVNTEKN LKESFEGGKM EQSPEAVVYA SSPSESYGTE ENSETNLSPQ TKSRKKKKKL SFPRFFMFLS
801: KKKSHNN
Arabidopsis Description
WEB1WEB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VMR8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.