Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G26570.1 | EER92167 | AT2G26570.1 | 20974974 |
| AT2G26570.1 | KXG36701 | AT2G26570.1 | 20974974 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029420_P002 | Maize | nucleus | 81.51 | 81.51 |
| Os03t0395300-01 | Rice | plasma membrane | 60.33 | 60.95 |
| TraesCS1D01G248300.1 | Wheat | nucleus, plastid | 54.08 | 59.14 |
| TraesCS1A01G248800.1 | Wheat | nucleus | 58.55 | 58.85 |
| TraesCS1B01G259500.1 | Wheat | nucleus | 56.38 | 57.85 |
| HORVU1Hr1G062330.8 | Barley | nucleus | 59.31 | 51.44 |
| Solyc05g042150.1.1 | Tomato | cytosol | 11.86 | 48.44 |
| KXG36701 | Sorghum | nucleus | 50.89 | 48.36 |
| Bra034308.1-P | Field mustard | nucleus | 39.16 | 47.45 |
| Solyc07g026880.1.1 | Tomato | cytosol | 8.93 | 45.45 |
| CDX77048 | Canola | nucleus | 41.84 | 43.33 |
| CDY48180 | Canola | nucleus | 40.56 | 43.09 |
| Solyc04g078950.1.1 | Tomato | nucleus | 16.2 | 41.64 |
| GSMUA_Achr6P10120_001 | Banana | nucleus | 46.3 | 41.39 |
| VIT_18s0001g10560.t01 | Wine grape | nucleus | 44.52 | 41.35 |
| AT4G33390.1 | Thale cress | nucleus | 40.69 | 40.95 |
| AT2G26570.1 | Thale cress | nucleus | 41.07 | 39.9 |
| Solyc07g022910.2.1 | Tomato | plastid | 42.6 | 39.43 |
| Bra041137.1-P | Field mustard | nucleus | 28.06 | 39.22 |
| CDX72400 | Canola | nucleus | 33.93 | 39.12 |
| CDY46119 | Canola | nucleus | 32.91 | 38.0 |
| KRH07566 | Soybean | nucleus | 29.59 | 37.72 |
| PGSC0003DMT400039921 | Potato | nucleus | 40.94 | 37.5 |
| KRH45361 | Soybean | nucleus | 27.93 | 37.37 |
| CDX68971 | Canola | mitochondrion, nucleus, plastid | 38.39 | 37.34 |
| Solyc12g088830.1.1 | Tomato | nucleus | 40.05 | 37.25 |
| GSMUA_Achr5P17590_001 | Banana | nucleus | 38.9 | 37.2 |
| GSMUA_Achr10P... | Banana | cytosol | 38.65 | 37.18 |
| PGSC0003DMT400011385 | Potato | nucleus | 41.58 | 36.1 |
| Solyc08g015840.1.1 | Tomato | cytosol | 8.8 | 35.2 |
| CDY22380 | Canola | nucleus | 32.27 | 35.19 |
| Bra033647.1-P | Field mustard | nucleus | 32.14 | 34.95 |
| CDX71526 | Canola | nucleus | 31.25 | 33.84 |
| KRH51982 | Soybean | nucleus | 40.94 | 33.68 |
| AT5G42880.1 | Thale cress | nucleus | 32.02 | 33.42 |
| PGSC0003DMT400020677 | Potato | nucleus | 41.33 | 33.4 |
| KRH61284 | Soybean | nucleus | 41.45 | 33.4 |
| CDY62582 | Canola | nucleus | 30.99 | 33.2 |
| AT1G45545.2 | Thale cress | nucleus | 31.76 | 33.07 |
| CDY43212 | Canola | nucleus | 29.97 | 32.91 |
| CDY17054 | Canola | nucleus | 29.59 | 32.68 |
| Bra014049.1-P | Field mustard | nucleus | 31.25 | 32.49 |
| CDY17108 | Canola | nucleus | 29.85 | 32.01 |
| Bra040259.1-P | Field mustard | nucleus | 29.85 | 31.97 |
| KRH15355 | Soybean | nucleus | 40.56 | 31.49 |
| OQU93419 | Sorghum | cytosol | 25.26 | 29.03 |
| KXG35766 | Sorghum | nucleus | 28.44 | 27.81 |
| OQU79020 | Sorghum | nucleus | 19.39 | 23.35 |
Protein Annotations
| MapMan:20.5.8.1 | EntrezGene:8077101 | UniProt:C5WXM2 | ncoils:Coil | EnsemblPlants:EER92167 | ProteinID:EER92167 |
| ProteinID:EER92167.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0008150 | GO:GO:0009903 | GO:GO:0009904 | GO:GO:0009987 | GO:GO:0016043 | PFAM:PF05701 |
| PANTHER:PTHR32054 | PANTHER:PTHR32054:SF2 | EnsemblPlantsGene:SORBI_3001G347600 | UniParc:UPI0001A822C3 | InterPro:Web | RefSeq:XP_002465169.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:63693257..63697562
Molecular Weight (calculated)
87568.3 Da
IEP (calculated)
4.858
GRAVY (calculated)
-0.820
Length
784 amino acids
Sequence
(BLAST)
(BLAST)
001: MELLDSNGHG ETRAHNAENI APVSVKSPDT SLEIQEKFPH DLTEHQEELG SPVGRAGSLS PEILSHIEPA RASDDSSKDE GDHAAPTNKD EVKSISENGF
101: TGVCITPTAE IKSEEDNMHH ENIAATPKKK VESPKGSEGS HTGLVDTSAP FESVKEAVTK FGGIVDWKAY RAQSLERRRV MQLELEKVQQ EIPQCKEDWE
201: TAEVAKSHVI EELERTNRLV DELKHTLERA QLEVDQAKQD SELALLRAQE MEQGIDDEAS VIAQTQLAVA KERHEKAVEE LKLLKQELRS TQEQYAVLAT
301: ERDVAIKRAK EVVCAAKDTE KQVEELTLEL IASKESLELA HTSHHEAEEH RLGAALAKEQ DFLAWEKELQ EAQEELNQLN EQIASKTNME SEADENERKL
401: LSLKSALAAY VENKLNEEAG MVQEQGSDEA KEISRSIKEA LASKRKELAE FKGKLENARN EANLVRVIAE SLCSELDREK ALLATLQQSE GMASITVSSL
501: EAELNRTKQE IEMVHKKEAE TREKMAELPR MLQQAAQEAE DAKVAAHSAQ EELRKAKEEA EQTNASVTTA DTRLHAVLKE IEASKESERL AIVAAQAMQE
601: SKETGSIGAS PRGVTLPISE YHALSKRVHE AEEHANERVA AALAQIEVAK ESESRNLERL QEAFRDMDEK KSDLQIALER AERANEGKLG AEQELRRWRA
701: EHVQRRKAHE AAAQHGVSPV RTPPRMSVQQ KGSYQEENEL LTDPKLQNST GSKDQFVSDE KMRKKKSFLP QMSTLLSRKA QTQT
101: TGVCITPTAE IKSEEDNMHH ENIAATPKKK VESPKGSEGS HTGLVDTSAP FESVKEAVTK FGGIVDWKAY RAQSLERRRV MQLELEKVQQ EIPQCKEDWE
201: TAEVAKSHVI EELERTNRLV DELKHTLERA QLEVDQAKQD SELALLRAQE MEQGIDDEAS VIAQTQLAVA KERHEKAVEE LKLLKQELRS TQEQYAVLAT
301: ERDVAIKRAK EVVCAAKDTE KQVEELTLEL IASKESLELA HTSHHEAEEH RLGAALAKEQ DFLAWEKELQ EAQEELNQLN EQIASKTNME SEADENERKL
401: LSLKSALAAY VENKLNEEAG MVQEQGSDEA KEISRSIKEA LASKRKELAE FKGKLENARN EANLVRVIAE SLCSELDREK ALLATLQQSE GMASITVSSL
501: EAELNRTKQE IEMVHKKEAE TREKMAELPR MLQQAAQEAE DAKVAAHSAQ EELRKAKEEA EQTNASVTTA DTRLHAVLKE IEASKESERL AIVAAQAMQE
601: SKETGSIGAS PRGVTLPISE YHALSKRVHE AEEHANERVA AALAQIEVAK ESESRNLERL QEAFRDMDEK KSDLQIALER AERANEGKLG AEQELRRWRA
701: EHVQRRKAHE AAAQHGVSPV RTPPRMSVQQ KGSYQEENEL LTDPKLQNST GSKDQFVSDE KMRKKKSFLP QMSTLLSRKA QTQT
001: MEDLKTVEAS DNVVSDNVEK VNPELIDSTI RESNIQSATK VDNIPQSQTD TEETQQSQTD TEETQQSQTD DTTGNAKIYV DDTFSPSDAA TAAVLTGKDS
101: TSTTIVEEVM EPDEIGLPSV KITEAATGTA RNGGGSPRTV SSPRFSGSPV STGTPKNVDS HRGLIDTAAP FESVKEAVSK FGGITDWKSH RMQAVERRKL
201: IEEELKKIHE EIPEYKTHSE TAEAAKLQVL KELESTKRLI EQLKLNLDKA QTEEQQAKQD SELAKLRVEE MEQGIAEDVS VAAKAQLEVA KARHTTAITE
301: LSSVKEELET LHKEYDALVQ DKDVAVKKVE EAMLASKEVE KTVEELTIEL IATKESLESA HASHLEAEEQ RIGAAMARDQ DTHRWEKELK QAEEELQRLN
401: QQIHSSKDLK SKLDTASALL LDLKAELVAY MESKLKQEAC DSTTNTDPST ENMSHPDLHA AVASAKKELE EVNVNIEKAA AEVSCLKLAS SSLQLELEKE
501: KSTLASIKQR EGMASIAVAS IEAEIDRTRS EIASVQSKEK DAREKMVELP KQLQQAAEEA DEAKSLAEVA REELRKAKEE AEQAKAGAST MESRLFAAQK
601: EIEAAKASER LALAAIKALE ESESTLKAND TDSPRSVTLS LEEYYELSKR AHEAEELANA RVAAAVSRIE EAKETEMRSL EKLEEVNRDM DARKKALKEA
701: TEKAEKAKEG KLGVEQELRK WRAEHEQKRK AGDGVNTEKN LKESFEGGKM EQSPEAVVYA SSPSESYGTE ENSETNLSPQ TKSRKKKKKL SFPRFFMFLS
801: KKKSHNN
101: TSTTIVEEVM EPDEIGLPSV KITEAATGTA RNGGGSPRTV SSPRFSGSPV STGTPKNVDS HRGLIDTAAP FESVKEAVSK FGGITDWKSH RMQAVERRKL
201: IEEELKKIHE EIPEYKTHSE TAEAAKLQVL KELESTKRLI EQLKLNLDKA QTEEQQAKQD SELAKLRVEE MEQGIAEDVS VAAKAQLEVA KARHTTAITE
301: LSSVKEELET LHKEYDALVQ DKDVAVKKVE EAMLASKEVE KTVEELTIEL IATKESLESA HASHLEAEEQ RIGAAMARDQ DTHRWEKELK QAEEELQRLN
401: QQIHSSKDLK SKLDTASALL LDLKAELVAY MESKLKQEAC DSTTNTDPST ENMSHPDLHA AVASAKKELE EVNVNIEKAA AEVSCLKLAS SSLQLELEKE
501: KSTLASIKQR EGMASIAVAS IEAEIDRTRS EIASVQSKEK DAREKMVELP KQLQQAAEEA DEAKSLAEVA REELRKAKEE AEQAKAGAST MESRLFAAQK
601: EIEAAKASER LALAAIKALE ESESTLKAND TDSPRSVTLS LEEYYELSKR AHEAEELANA RVAAAVSRIE EAKETEMRSL EKLEEVNRDM DARKKALKEA
701: TEKAEKAKEG KLGVEQELRK WRAEHEQKRK AGDGVNTEKN LKESFEGGKM EQSPEAVVYA SSPSESYGTE ENSETNLSPQ TKSRKKKKKL SFPRFFMFLS
801: KKKSHNN
Arabidopsis Description
WEB1WEB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VMR8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.