Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72400 | Canola | nucleus | 80.71 | 80.59 |
| AT4G33390.1 | Thale cress | nucleus | 65.39 | 57.0 |
| CDX68971 | Canola | mitochondrion, nucleus, plastid | 66.57 | 56.08 |
| Solyc07g026880.1.1 | Tomato | cytosol | 12.08 | 53.25 |
| Solyc05g042150.1.1 | Tomato | cytosol | 15.02 | 53.12 |
| Solyc04g078950.1.1 | Tomato | nucleus | 22.83 | 50.82 |
| CDY48180 | Canola | nucleus | 53.31 | 49.05 |
| CDX77048 | Canola | nucleus | 54.34 | 48.74 |
| VIT_18s0001g10560.t01 | Wine grape | nucleus | 52.28 | 42.06 |
| KRH07566 | Soybean | nucleus | 37.85 | 41.79 |
| CDY22380 | Canola | nucleus | 43.45 | 41.03 |
| CDX71526 | Canola | nucleus | 42.56 | 39.92 |
| Solyc07g022910.2.1 | Tomato | plastid | 49.19 | 39.43 |
| Solyc08g015840.1.1 | Tomato | cytosol | 11.34 | 39.29 |
| KRH45361 | Soybean | nucleus | 33.43 | 38.74 |
| PGSC0003DMT400039921 | Potato | nucleus | 48.01 | 38.08 |
| PGSC0003DMT400011385 | Potato | nucleus | 50.52 | 37.98 |
| CDY17108 | Canola | nucleus | 40.65 | 37.76 |
| Solyc12g088830.1.1 | Tomato | nucleus | 46.69 | 37.6 |
| CDY43212 | Canola | nucleus | 39.47 | 37.53 |
| CDY17054 | Canola | nucleus | 39.03 | 37.32 |
| TraesCS1D01G248300.1 | Wheat | nucleus, plastid | 38.73 | 36.68 |
| CDY62582 | Canola | nucleus | 39.18 | 36.34 |
| HORVU2Hr1G030630.1 | Barley | nucleus | 42.42 | 36.32 |
| TraesCS2A01G166400.1 | Wheat | cytosol | 42.27 | 36.19 |
| KRH51982 | Soybean | nucleus | 49.78 | 35.47 |
| Os03t0395300-01 | Rice | plasma membrane | 40.35 | 35.31 |
| KRH61284 | Soybean | nucleus | 50.37 | 35.15 |
| TraesCS2B01G192300.1 | Wheat | nucleus | 43.15 | 34.84 |
| PGSC0003DMT400020677 | Potato | nucleus | 49.63 | 34.74 |
| TraesCS1A01G248800.1 | Wheat | nucleus | 39.76 | 34.62 |
| TraesCS1B01G259500.1 | Wheat | nucleus | 38.88 | 34.55 |
| GSMUA_Achr6P10120_001 | Banana | nucleus | 44.48 | 34.44 |
| Zm00001d022161_P001 | Maize | nucleus | 40.35 | 34.25 |
| TraesCS2D01G173700.1 | Wheat | nucleus | 42.42 | 34.24 |
| Zm00001d029420_P002 | Maize | nucleus | 39.32 | 34.06 |
| GSMUA_Achr5P17590_001 | Banana | nucleus | 40.94 | 33.9 |
| KXG36701 | Sorghum | nucleus | 40.94 | 33.7 |
| Os07t0619100-01 | Rice | plasma membrane | 40.06 | 33.29 |
| EER92167 | Sorghum | nucleus | 38.0 | 32.91 |
| GSMUA_Achr9P27100_001 | Banana | nucleus | 39.76 | 32.85 |
| GSMUA_Achr10P... | Banana | cytosol | 39.18 | 32.64 |
| KRH15355 | Soybean | nucleus | 47.86 | 32.18 |
| Zm00001d047240_P002 | Maize | nucleus | 37.11 | 32.1 |
| GSMUA_Achr5P24580_001 | Banana | cytosol | 28.28 | 30.57 |
| Os06t0314000-01 | Rice | cytosol, nucleus | 22.53 | 30.24 |
| HORVU1Hr1G062330.8 | Barley | nucleus | 39.62 | 29.76 |
| TraesCS4B01G300400.1 | Wheat | nucleus | 33.58 | 26.36 |
| CDY36768 | Canola | nucleus | 20.47 | 21.55 |
| CDY28631 | Canola | nucleus | 20.32 | 21.17 |
| CDY17364 | Canola | nucleus | 20.32 | 21.13 |
| CDY11973 | Canola | nucleus | 19.88 | 21.0 |
| CDY31245 | Canola | cytosol | 16.64 | 20.62 |
| CDY21038 | Canola | cytosol | 16.49 | 20.48 |
| CDY42964 | Canola | cytosol | 15.32 | 20.0 |
| CDY11974 | Canola | cytosol, nucleus, plastid | 8.25 | 19.31 |
| CDX90485 | Canola | cytosol | 15.02 | 19.25 |
| CDY35594 | Canola | nucleus | 14.73 | 19.12 |
| CDY50127 | Canola | cytosol | 14.73 | 19.12 |
| CDY09639 | Canola | cytosol | 14.87 | 19.02 |
| CDY58167 | Canola | cytosol | 14.43 | 18.85 |
| CDY15972 | Canola | cytosol | 18.11 | 13.71 |
| CDY26542 | Canola | cytosol | 18.26 | 12.29 |
| CDY35593 | Canola | cytosol | 6.04 | 12.17 |
Protein Annotations
| EnsemblPlants:CDY46119 | EnsemblPlantsGene:GSBRNA2T00083280001 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF2 |
| PFAM:PF05701 | ProteinID:CDY46119 | ProteinID:CDY46119.1 | SEG:seg | UniParc:UPI0004EE9D23 | UniProt:A0A078I9W0 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA03g52490DBnaA03g52490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I9W0]
Coordinates
chrLK032650:-:129731..131838
Molecular Weight (calculated)
76290.8 Da
IEP (calculated)
4.730
GRAVY (calculated)
-0.842
Length
679 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDLKLTEAV SPPPEEPSVT SNVIELAQPQ ANEAMQESQD NEDSTENEKV YMDDTFLASS SSQTEETQDS SSYSDTTTPV FVSEIGLPPV KTKYRSEGTT
101: TRKRSLSSQR SLGSPRTLGS SSPLSNETPK SLDSYKDSID TTSPIESVKE AVSKFGGITD WKSHKMQVVE RRKFVEQELK EIEEQIPEHK KQSETVEMSK
201: LQAVEELEST KRLIEELKLN LEKAETEEKQ AKQDSDLAKM RVEEMEQGVA GEASVASKAQ LEVAQARHTS AISELESVKE EIQTLQKEYD GLVREKDLAM
301: KEAAEAVLAS KEVEKRVEEL SIELIATKES LECAHSSHLE AEELQRLMKN FVSQTDVASA KKELEEVNMN IEKATSEVKC LKVASSSLRV ELEKERSALE
401: SIKQRQGMAS VAVVSLEAEI DITRFEIALV ESKGKEAREE MVELPKQLQQ ASQDADEAKS LAELASEELR KSQEEAEKAK AGASAMEGRL LAAQKEIEDV
501: KASERLALAA IKALQESESD LEEKNSVTLT LEEYNELSKR AKEAEERVAA AVCEIEEAKE EEKRRLEKLE EVNKEMVLRK ERLAEVTEKA EKAKEGKLGV
601: EQELRKWREE HKVKRKNVEN GVKIEKSHER SLEGSKEKGN ESSGTETNTI PPEIPVKKKK KFFPRFFMFL MKKKKKSPK
101: TRKRSLSSQR SLGSPRTLGS SSPLSNETPK SLDSYKDSID TTSPIESVKE AVSKFGGITD WKSHKMQVVE RRKFVEQELK EIEEQIPEHK KQSETVEMSK
201: LQAVEELEST KRLIEELKLN LEKAETEEKQ AKQDSDLAKM RVEEMEQGVA GEASVASKAQ LEVAQARHTS AISELESVKE EIQTLQKEYD GLVREKDLAM
301: KEAAEAVLAS KEVEKRVEEL SIELIATKES LECAHSSHLE AEELQRLMKN FVSQTDVASA KKELEEVNMN IEKATSEVKC LKVASSSLRV ELEKERSALE
401: SIKQRQGMAS VAVVSLEAEI DITRFEIALV ESKGKEAREE MVELPKQLQQ ASQDADEAKS LAELASEELR KSQEEAEKAK AGASAMEGRL LAAQKEIEDV
501: KASERLALAA IKALQESESD LEEKNSVTLT LEEYNELSKR AKEAEERVAA AVCEIEEAKE EEKRRLEKLE EVNKEMVLRK ERLAEVTEKA EKAKEGKLGV
601: EQELRKWREE HKVKRKNVEN GVKIEKSHER SLEGSKEKGN ESSGTETNTI PPEIPVKKKK KFFPRFFMFL MKKKKKSPK
001: MEDLKTTDAL SLPVVSDNGG IIEPELQLPQ AIPTELENNE EENGTIQQSQ SEEDSAENGK IYMDDTFLPS KSQVKETQDS PTTPSFVSPS AEIVLPRVNT
101: KYEAEGTTRN AVSPRPLYSP RSIGSPRALL SPRFAGSSSP LSNGTPISMD SFRDSIDTAS PFESVKEAVS KFGGITDWKA HRMKVLERRN FVEQELDKIQ
201: EEIPEYKKKS EMVEMSKMLA VEELESTKRL IEELKLNLEK AETEEQQAKQ DSELAKLRVQ EMEQGIADEA SVASKAQLEV AQARHTSAIS ELESVKEELQ
301: TLQNEYDALV KEKDLAVKEA EEAVIASKEV ERKVEELTIE LIATKESLEC AHSSHLEAEE HRIGAAMLRD QETHRWEKEL KQAEEELQRL KQHLVSTKEL
401: QVKLEFASAL LLDLKKELAD HKESSKVKEE TSETVVTNIE ISLQEKTTDI QKAVASAKKE LEEVNANVEK ATSEVNCLKV ASSSLRLEID KEKSALDSLK
501: QREGMASVTV ASLEAEIDIT RCEIALVKSK EKETREEMVE LPKQLQQASQ EADEAKSFAE LAREELRKSQ EEAEQAKAGA STMESRLFAA QKEIEAIKAS
601: ERLALAAIKA LQESESSSKE NAVDSPRTVT LTIEEYYELS KRAHEAEEAA NARVAAAVSE VGEAKETEKR SLEKLEEVNK EMVERKATLA GAMEKAEKAK
701: EGKLGVEQEL RKWREVSEKK RKNGSSHGKS IQGSKEKEAE TSVSNETETN PIPQVNPVKK KKKLFPRFFM FLMKKKSHK
101: KYEAEGTTRN AVSPRPLYSP RSIGSPRALL SPRFAGSSSP LSNGTPISMD SFRDSIDTAS PFESVKEAVS KFGGITDWKA HRMKVLERRN FVEQELDKIQ
201: EEIPEYKKKS EMVEMSKMLA VEELESTKRL IEELKLNLEK AETEEQQAKQ DSELAKLRVQ EMEQGIADEA SVASKAQLEV AQARHTSAIS ELESVKEELQ
301: TLQNEYDALV KEKDLAVKEA EEAVIASKEV ERKVEELTIE LIATKESLEC AHSSHLEAEE HRIGAAMLRD QETHRWEKEL KQAEEELQRL KQHLVSTKEL
401: QVKLEFASAL LLDLKKELAD HKESSKVKEE TSETVVTNIE ISLQEKTTDI QKAVASAKKE LEEVNANVEK ATSEVNCLKV ASSSLRLEID KEKSALDSLK
501: QREGMASVTV ASLEAEIDIT RCEIALVKSK EKETREEMVE LPKQLQQASQ EADEAKSFAE LAREELRKSQ EEAEQAKAGA STMESRLFAA QKEIEAIKAS
601: ERLALAAIKA LQESESSSKE NAVDSPRTVT LTIEEYYELS KRAHEAEEAA NARVAAAVSE VGEAKETEKR SLEKLEEVNK EMVERKATLA GAMEKAEKAK
701: EGKLGVEQEL RKWREVSEKK RKNGSSHGKS IQGSKEKEAE TSVSNETETN PIPQVNPVKK KKKLFPRFFM FLMKKKSHK
Arabidopsis Description
WEL1Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZB6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.