Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028956.1-P | Field mustard | nucleus | 94.42 | 94.57 |
| CDY11974 | Canola | cytosol, nucleus, plastid | 42.48 | 94.48 |
| CDY11973 | Canola | nucleus | 90.23 | 90.51 |
| CDY17364 | Canola | nucleus | 81.24 | 80.25 |
| CDY28631 | Canola | nucleus | 80.62 | 79.75 |
| AT5G55860.1 | Thale cress | nucleus | 80.0 | 79.51 |
| KRH75103 | Soybean | nucleus | 20.16 | 54.17 |
| VIT_19s0015g00740.t01 | Wine grape | nucleus | 52.71 | 52.31 |
| KRG98464 | Soybean | mitochondrion | 52.87 | 52.22 |
| KRH46399 | Soybean | cytosol | 52.09 | 51.45 |
| PGSC0003DMT400057359 | Potato | nucleus | 53.18 | 50.81 |
| Solyc07g065680.2.1 | Tomato | nucleus | 52.56 | 50.22 |
| GSMUA_Achr4P18510_001 | Banana | nucleus | 45.89 | 48.29 |
| GSMUA_Achr7P16580_001 | Banana | cytosol | 45.58 | 47.73 |
| KRH73920 | Soybean | nucleus | 45.74 | 45.45 |
| Os12t0271600-01 | Rice | plasma membrane | 44.65 | 44.51 |
| OQU79020 | Sorghum | nucleus | 44.34 | 43.93 |
| Zm00001d041088_P004 | Maize | nucleus | 44.03 | 43.76 |
| Zm00001d023629_P001 | Maize | nucleus | 43.1 | 42.64 |
| TraesCS4A01G188200.1 | Wheat | nucleus | 42.02 | 42.61 |
| TraesCS4B01G127500.1 | Wheat | nucleus | 41.86 | 42.59 |
| TraesCS4D01G125200.1 | Wheat | nucleus | 41.71 | 42.43 |
| TraesCS5B01G103500.1 | Wheat | nucleus | 42.02 | 42.41 |
| HORVU5Hr1G029890.1 | Barley | nucleus | 42.33 | 42.33 |
| TraesCS5A01G098800.2 | Wheat | cytosol | 41.71 | 42.1 |
| TraesCS5D01G110400.2 | Wheat | cytosol | 40.93 | 41.31 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.14 | 38.86 |
| CDY21038 | Canola | cytosol | 31.32 | 36.93 |
| CDY31245 | Canola | cytosol | 30.54 | 35.95 |
| CDY58167 | Canola | cytosol | 22.79 | 28.27 |
| CDY09639 | Canola | cytosol | 22.79 | 27.68 |
| CDX90485 | Canola | cytosol | 22.48 | 27.36 |
| CDY50127 | Canola | cytosol | 22.17 | 27.34 |
| CDY42964 | Canola | cytosol | 21.55 | 26.73 |
| CDY35594 | Canola | nucleus | 21.55 | 26.58 |
| CDY15972 | Canola | cytosol | 31.63 | 22.74 |
| CDY48180 | Canola | nucleus | 24.19 | 21.14 |
| CDY46119 | Canola | nucleus | 21.55 | 20.47 |
| CDX77048 | Canola | nucleus | 23.72 | 20.21 |
| CDX72400 | Canola | nucleus | 20.93 | 19.85 |
| CDY26542 | Canola | cytosol | 30.85 | 19.72 |
| CDX68971 | Canola | mitochondrion, nucleus, plastid | 23.88 | 19.11 |
| CDX71526 | Canola | nucleus | 21.24 | 18.92 |
| CDY22380 | Canola | nucleus | 21.09 | 18.92 |
| CDY17054 | Canola | nucleus | 20.47 | 18.59 |
| CDY43212 | Canola | nucleus | 19.22 | 17.37 |
| CDY62582 | Canola | nucleus | 19.69 | 17.35 |
| CDY17108 | Canola | nucleus | 19.07 | 16.83 |
| CDY35593 | Canola | cytosol | 6.82 | 13.06 |
Protein Annotations
| EnsemblPlants:CDY36768 | EnsemblPlantsGene:GSBRNA2T00062598001 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF3 |
| PFAM:PF05701 | ProteinID:CDY36768 | ProteinID:CDY36768.1 | SEG:seg | UniParc:UPI0004EE0083 | UniProt:A0A078HIV5 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA03g11180DBnaA03g11180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HIV5]
Coordinates
chrLK032383:+:183466..186147
Molecular Weight (calculated)
71657.5 Da
IEP (calculated)
4.976
GRAVY (calculated)
-0.718
Length
645 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAKKGRQDS SPSVEVGEID TSAPFQSVKH AVNLFGEAAL SADKHPLIRK PTPHSAEKVL VKQTELHLAE KELNKLKEQV NHAETVREQA LSELDWAKRT
101: VDELTRKLEA VNESRDSANK VTEAAKSQIK EAQPETVSVS STDDEYVMVC KELDAAKQEL RTIRQVSNEV ADSKTVALTK EEEAKEVTKV SSEKIELLRE
201: EITAVNASVE QTKLACSQSR KDQSEIFSEK EIQQQAYKAG MEESGKKLLA LKKEFDPEFA KKLEAQLSET YNEIDELQKQ MESVKASSDV DSVNGVSLEL
301: NEAKGLLEKF VEEEKSLRES VESLKEELKN VKIKRSEVEA KEAEIEAVAG ELNLKLSKGK SELEECVEEE TKAKAALEDM MSTLNQISSE TEAARREAEE
401: MRNKAERLVK EAETACLSLE ETELNLRVAL DEVEEAKAAE AKALEEIKSL SEKTDAVRKS TSSESGEAQS ITLSQEELNS LRKRAEVVDK LAGMKVAAAV
501: AQVEAVRASE NETVKKLETT QEEIVKIKTA TEEALKKAAM ADAAKKAVEG ELRRWRERDQ KKAEEVASRI LAEAEAKMSA ESSSPQHHHY KATTKQKPII
601: NKLEKTKTSV VSKKVLLPNL SGIFNRKKSQ VEWGSPSYLP GEKPI
101: VDELTRKLEA VNESRDSANK VTEAAKSQIK EAQPETVSVS STDDEYVMVC KELDAAKQEL RTIRQVSNEV ADSKTVALTK EEEAKEVTKV SSEKIELLRE
201: EITAVNASVE QTKLACSQSR KDQSEIFSEK EIQQQAYKAG MEESGKKLLA LKKEFDPEFA KKLEAQLSET YNEIDELQKQ MESVKASSDV DSVNGVSLEL
301: NEAKGLLEKF VEEEKSLRES VESLKEELKN VKIKRSEVEA KEAEIEAVAG ELNLKLSKGK SELEECVEEE TKAKAALEDM MSTLNQISSE TEAARREAEE
401: MRNKAERLVK EAETACLSLE ETELNLRVAL DEVEEAKAAE AKALEEIKSL SEKTDAVRKS TSSESGEAQS ITLSQEELNS LRKRAEVVDK LAGMKVAAAV
501: AQVEAVRASE NETVKKLETT QEEIVKIKTA TEEALKKAAM ADAAKKAVEG ELRRWRERDQ KKAEEVASRI LAEAEAKMSA ESSSPQHHHY KATTKQKPII
601: NKLEKTKTSV VSKKVLLPNL SGIFNRKKSQ VEWGSPSYLP GEKPI
001: MVAKKGRRDS SDSSPIVEVG EIDTSAPFQS VKDAVNLFGE AAFSAEKPVF RKPNPQSAEK VLVKQTELHL AQKELNKLKE QLKNAETIRE QALSELEWSK
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF
Arabidopsis Description
WEB family protein At5g55860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.