Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040259.1-P | Field mustard | nucleus | 82.51 | 82.51 |
| CDY17108 | Canola | nucleus | 79.78 | 79.89 |
| CDY43212 | Canola | nucleus | 64.75 | 66.39 |
| CDY17054 | Canola | nucleus | 63.93 | 65.92 |
| AT1G45545.2 | Thale cress | nucleus | 63.11 | 61.35 |
| CDX71526 | Canola | nucleus | 50.27 | 50.83 |
| CDY22380 | Canola | nucleus | 49.45 | 50.35 |
| Solyc05g042150.1.1 | Tomato | cytosol | 11.75 | 44.79 |
| Solyc07g026880.1.1 | Tomato | cytosol | 8.74 | 41.56 |
| CDX77048 | Canola | nucleus | 42.08 | 40.69 |
| Solyc04g078950.1.1 | Tomato | nucleus | 16.94 | 40.66 |
| CDY48180 | Canola | nucleus | 40.3 | 39.97 |
| CDY46119 | Canola | nucleus | 36.34 | 39.18 |
| CDX72400 | Canola | nucleus | 35.79 | 38.53 |
| CDX68971 | Canola | mitochondrion, nucleus, plastid | 40.71 | 36.97 |
| Solyc07g022910.2.1 | Tomato | plastid | 42.35 | 36.6 |
| VIT_18s0001g10560.t01 | Wine grape | nucleus | 41.94 | 36.37 |
| KRH07566 | Soybean | nucleus | 29.92 | 35.61 |
| KRH45361 | Soybean | nucleus | 27.6 | 34.47 |
| PGSC0003DMT400039921 | Potato | nucleus | 40.3 | 34.46 |
| Solyc12g088830.1.1 | Tomato | nucleus | 39.62 | 34.4 |
| PGSC0003DMT400011385 | Potato | nucleus | 41.67 | 33.78 |
| TraesCS1D01G248300.1 | Wheat | nucleus, plastid | 31.83 | 32.5 |
| Os03t0395300-01 | Rice | plasma membrane | 34.02 | 32.09 |
| PGSC0003DMT400020677 | Potato | nucleus | 42.21 | 31.86 |
| KRH51982 | Soybean | nucleus | 41.39 | 31.79 |
| GSMUA_Achr6P10120_001 | Banana | nucleus | 37.98 | 31.7 |
| EER92167 | Sorghum | nucleus | 33.2 | 30.99 |
| GSMUA_Achr9P27100_001 | Banana | nucleus | 34.56 | 30.78 |
| KRH61284 | Soybean | nucleus | 40.71 | 30.63 |
| Zm00001d047240_P002 | Maize | nucleus | 32.79 | 30.57 |
| GSMUA_Achr10P... | Banana | cytosol | 34.02 | 30.55 |
| Zm00001d029420_P002 | Maize | nucleus | 32.65 | 30.48 |
| KXG36701 | Sorghum | nucleus | 33.88 | 30.06 |
| TraesCS1A01G248800.1 | Wheat | nucleus | 31.97 | 30.0 |
| KRH15355 | Soybean | nucleus | 41.39 | 30.0 |
| TraesCS1B01G259500.1 | Wheat | nucleus | 31.28 | 29.97 |
| TraesCS2A01G166400.1 | Wheat | cytosol | 32.24 | 29.76 |
| Zm00001d022161_P001 | Maize | nucleus | 32.51 | 29.75 |
| Solyc08g015840.1.1 | Tomato | cytosol | 7.92 | 29.59 |
| HORVU2Hr1G030630.1 | Barley | nucleus | 31.97 | 29.51 |
| GSMUA_Achr5P17590_001 | Banana | nucleus | 32.92 | 29.39 |
| GSMUA_Achr5P24580_001 | Banana | cytosol | 24.59 | 28.66 |
| TraesCS2D01G173700.1 | Wheat | nucleus | 32.92 | 28.66 |
| TraesCS2B01G192300.1 | Wheat | nucleus | 32.79 | 28.54 |
| Os07t0619100-01 | Rice | plasma membrane | 31.69 | 28.4 |
| HORVU1Hr1G062330.8 | Barley | nucleus | 32.65 | 26.44 |
| TraesCS4B01G300400.1 | Wheat | nucleus | 28.55 | 24.16 |
| Os06t0314000-01 | Rice | cytosol, nucleus | 16.12 | 23.32 |
| CDY21038 | Canola | cytosol | 15.57 | 20.84 |
| CDY31245 | Canola | cytosol | 15.57 | 20.8 |
| CDY58167 | Canola | cytosol | 14.34 | 20.19 |
| CDY42964 | Canola | cytosol | 14.21 | 20.0 |
| CDY28631 | Canola | nucleus | 17.76 | 19.94 |
| CDY17364 | Canola | nucleus | 17.76 | 19.91 |
| CDY50127 | Canola | cytosol | 14.21 | 19.89 |
| CDY36768 | Canola | nucleus | 17.35 | 19.69 |
| CDY35594 | Canola | nucleus | 13.8 | 19.31 |
| CDY11973 | Canola | nucleus | 16.94 | 19.28 |
| CDX90485 | Canola | cytosol | 13.39 | 18.49 |
| CDY09639 | Canola | cytosol | 13.11 | 18.08 |
| CDY11974 | Canola | cytosol, nucleus, plastid | 6.69 | 16.9 |
| CDY15972 | Canola | cytosol | 18.03 | 14.72 |
| CDY26542 | Canola | cytosol | 17.62 | 12.78 |
| CDY35593 | Canola | cytosol | 5.19 | 11.28 |
Protein Annotations
| EnsemblPlants:CDY62582 | EnsemblPlantsGene:GSBRNA2T00036416001 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF2 |
| PFAM:PF05701 | ProteinID:CDY62582 | ProteinID:CDY62582.1 | SEG:seg | UniParc:UPI0004EEF100 | UniProt:A0A078J7D8 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA10g28710DBnaA10g28710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J7D8]
Coordinates
chrLK034164:+:19112..21463
Molecular Weight (calculated)
82381.7 Da
IEP (calculated)
4.832
GRAVY (calculated)
-0.753
Length
732 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDDDKASND FSLLPDLNDD FSTPFTSIEF DSSILDLINL EDGGETPNLL PEHNPFLESV NTFQEDEDLH FSVEAESPKV YIAPRAIINH HDSFSLDPRI
101: DTIEDARISF PDSPRGSQDL SLSRLKVPGS PRALALPRAS GSPRFGSPTS PAALIDTAAP FESVKDAVSK FGGITDWKAH KIQTIEKRKT VDQELEKIQE
201: DMPEYKKQAF VAEEAKQQVV MELERTKSVV EELKMELEKA EKEEQQAKQD SDLAKLRVEE MEHGIADASS IAVKTQLEVA KVRNVSAVYE LRVDSVLAAK
301: EVEKQMTGLT IEVIATKKLL ESARAAHLEA EENKLEAAMA RDQDVYNREK ELKMVEEEIE RFRQEMHASD DVRIKIETAS VLQQDLRAEI TSYKDDNMMI
401: EKRNNSDIQA AVDSTRKELE EVKSNIGKAI SEVKTLKIIV GSLQSELERE KKDLSETKQR EALSVHRNSK EAREERCSEI AKKLQEANKE AEEATSLASA
501: AQEELRKAKE ESEEARTGVS AIESQLVEAK REMEAAKASE KLALAAIKAL QETEYSTKIE DISTPRSIII SVEEYYELSK QAHEVEEAAN KKLAEIVSQI
601: EVAKEEESRV LEKIEEVNRE TAFQREKLKE AMDKVEKARD KKVSMDHELR KWSSENGKRS PMSSPEGGEK ESHDLGKSKS ALHSARSFAF GEEGSNNVGD
701: SSNVTHETKK KKKRFSLLPK VFMFLSRKKS NK
101: DTIEDARISF PDSPRGSQDL SLSRLKVPGS PRALALPRAS GSPRFGSPTS PAALIDTAAP FESVKDAVSK FGGITDWKAH KIQTIEKRKT VDQELEKIQE
201: DMPEYKKQAF VAEEAKQQVV MELERTKSVV EELKMELEKA EKEEQQAKQD SDLAKLRVEE MEHGIADASS IAVKTQLEVA KVRNVSAVYE LRVDSVLAAK
301: EVEKQMTGLT IEVIATKKLL ESARAAHLEA EENKLEAAMA RDQDVYNREK ELKMVEEEIE RFRQEMHASD DVRIKIETAS VLQQDLRAEI TSYKDDNMMI
401: EKRNNSDIQA AVDSTRKELE EVKSNIGKAI SEVKTLKIIV GSLQSELERE KKDLSETKQR EALSVHRNSK EAREERCSEI AKKLQEANKE AEEATSLASA
501: AQEELRKAKE ESEEARTGVS AIESQLVEAK REMEAAKASE KLALAAIKAL QETEYSTKIE DISTPRSIII SVEEYYELSK QAHEVEEAAN KKLAEIVSQI
601: EVAKEEESRV LEKIEEVNRE TAFQREKLKE AMDKVEKARD KKVSMDHELR KWSSENGKRS PMSSPEGGEK ESHDLGKSKS ALHSARSFAF GEEGSNNVGD
701: SSNVTHETKK KKKRFSLLPK VFMFLSRKKS NK
001: MDDDHKVSND ISLLPDLNFD SSSPFTSIEF DSSICDLLNL ETGGDTPNLI PDHNPFFDSF DGLQEEEEDS HFVVEPESPK VYIAPRVMIN HQDSFSLDSR
101: NDEYIEDVKI LPGSPGGIQD LGLSRLKVPG SPRAFVHPRS SGSPRFVSPT SPVLIDTAAP FESVKEAVSK FGGITDWKAH KIQTIERRKT VDQELEKIQE
201: DMPDYKKQAV VAEEAKHQVV MELERTRNVV EELKLELEKA EKEEQQAKQD SDLAKLRVEE MEQGIAGEVS VAAKSQLEVA KARHLSAVSE LGTIREEIEM
301: VSNEYESLLT EKDLAAKKAE DSVLKAKDVE KQMEGLTMEV IATKQLLELA HATHLEAQEK KLDAAMARDQ DVYNQEKELK MVEDEIKRFR QDIDAADDVK
401: TKLKTASALQ QDLRAEIAAY KDSNMGKRNN SDIQAAVDSA RKELEEVISN IEKANSEVKT LKIIVGSLQS ELAREKHDLS ETRQRNREDT REEKCTEIAK
501: KLQEASREAE EAKSLAIAAR EELRKAKEES DEAKTGLSAV ERQLMESKKE MEASRASEKL ALAAIKALQE TEYANKIEDI SSSPKSIIIS VEEYYELSKQ
601: AHEVEEAANR KLAEIVSKIE VAKEEESRIL ENLEEVSRET AIRKVELKEA MTKVEKARDG KVGMDHELRK WRSDNGNRSP EGGNKENLSK SKSALHQPTT
701: FTFGEQASSS NVTPQASSSN VTPETETKKK KKRFSLLPKV FMFLSRKKSS NK
101: NDEYIEDVKI LPGSPGGIQD LGLSRLKVPG SPRAFVHPRS SGSPRFVSPT SPVLIDTAAP FESVKEAVSK FGGITDWKAH KIQTIERRKT VDQELEKIQE
201: DMPDYKKQAV VAEEAKHQVV MELERTRNVV EELKLELEKA EKEEQQAKQD SDLAKLRVEE MEQGIAGEVS VAAKSQLEVA KARHLSAVSE LGTIREEIEM
301: VSNEYESLLT EKDLAAKKAE DSVLKAKDVE KQMEGLTMEV IATKQLLELA HATHLEAQEK KLDAAMARDQ DVYNQEKELK MVEDEIKRFR QDIDAADDVK
401: TKLKTASALQ QDLRAEIAAY KDSNMGKRNN SDIQAAVDSA RKELEEVISN IEKANSEVKT LKIIVGSLQS ELAREKHDLS ETRQRNREDT REEKCTEIAK
501: KLQEASREAE EAKSLAIAAR EELRKAKEES DEAKTGLSAV ERQLMESKKE MEASRASEKL ALAAIKALQE TEYANKIEDI SSSPKSIIIS VEEYYELSKQ
601: AHEVEEAANR KLAEIVSKIE VAKEEESRIL ENLEEVSRET AIRKVELKEA MTKVEKARDG KVGMDHELRK WRSDNGNRSP EGGNKENLSK SKSALHQPTT
701: FTFGEQASSS NVTPQASSSN VTPETETKKK KKRFSLLPKV FMFLSRKKSS NK
Arabidopsis Description
Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT1G45545]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.