Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002870.1-P | Field mustard | nucleus | 99.85 | 99.85 |
| CDY28631 | Canola | nucleus | 96.17 | 96.32 |
| AT5G55860.1 | Thale cress | nucleus | 86.37 | 86.9 |
| CDY36768 | Canola | nucleus | 80.25 | 81.24 |
| CDY11973 | Canola | nucleus | 79.02 | 80.25 |
| CDY11974 | Canola | cytosol, nucleus, plastid | 34.3 | 77.24 |
| KRH75103 | Soybean | nucleus | 21.29 | 57.92 |
| VIT_19s0015g00740.t01 | Wine grape | nucleus | 56.05 | 56.31 |
| KRG98464 | Soybean | mitochondrion | 55.44 | 55.44 |
| KRH46399 | Soybean | cytosol | 54.82 | 54.82 |
| PGSC0003DMT400057359 | Potato | nucleus | 56.2 | 54.37 |
| Solyc07g065680.2.1 | Tomato | nucleus | 56.05 | 54.22 |
| GSMUA_Achr4P18510_001 | Banana | nucleus | 45.79 | 48.78 |
| GSMUA_Achr7P16580_001 | Banana | cytosol | 45.48 | 48.21 |
| KRH73920 | Soybean | nucleus | 47.63 | 47.92 |
| Os12t0271600-01 | Rice | plasma membrane | 46.71 | 47.14 |
| OQU79020 | Sorghum | nucleus | 46.25 | 46.39 |
| Zm00001d041088_P004 | Maize | nucleus | 46.09 | 46.38 |
| Zm00001d023629_P001 | Maize | nucleus | 44.72 | 44.79 |
| TraesCS4A01G188200.1 | Wheat | nucleus | 43.34 | 44.5 |
| TraesCS4B01G127500.1 | Wheat | nucleus | 43.19 | 44.48 |
| TraesCS4D01G125200.1 | Wheat | nucleus | 43.03 | 44.32 |
| TraesCS5B01G103500.1 | Wheat | nucleus | 43.34 | 44.29 |
| TraesCS5A01G098800.2 | Wheat | cytosol | 43.19 | 44.13 |
| HORVU5Hr1G029890.1 | Barley | nucleus | 43.49 | 44.03 |
| TraesCS5D01G110400.2 | Wheat | cytosol | 42.57 | 43.51 |
| GSMUA_AchrUn_... | Banana | nucleus | 37.83 | 39.02 |
| CDY21038 | Canola | cytosol | 30.63 | 36.56 |
| CDY31245 | Canola | cytosol | 30.32 | 36.13 |
| CDY50127 | Canola | cytosol | 23.28 | 29.06 |
| CDY58167 | Canola | cytosol | 22.97 | 28.85 |
| CDY35594 | Canola | nucleus | 22.51 | 28.11 |
| CDX90485 | Canola | cytosol | 22.66 | 27.92 |
| CDY42964 | Canola | cytosol | 22.21 | 27.88 |
| CDY09639 | Canola | cytosol | 22.66 | 27.87 |
| CDY15972 | Canola | cytosol | 31.55 | 22.97 |
| CDY48180 | Canola | nucleus | 24.04 | 21.27 |
| CDX77048 | Canola | nucleus | 23.74 | 20.48 |
| CDX72400 | Canola | nucleus | 21.29 | 20.44 |
| CDY46119 | Canola | nucleus | 21.13 | 20.32 |
| CDY26542 | Canola | cytosol | 30.93 | 20.02 |
| CDX68971 | Canola | mitochondrion, nucleus, plastid | 24.5 | 19.85 |
| CDY22380 | Canola | nucleus | 21.59 | 19.61 |
| CDX71526 | Canola | nucleus | 21.59 | 19.48 |
| CDY17054 | Canola | nucleus | 20.67 | 19.01 |
| CDY43212 | Canola | nucleus | 19.45 | 17.79 |
| CDY62582 | Canola | nucleus | 19.91 | 17.76 |
| CDY17108 | Canola | nucleus | 19.45 | 17.37 |
| CDY35593 | Canola | cytosol | 7.5 | 14.54 |
Protein Annotations
| EnsemblPlants:CDY17364 | EnsemblPlantsGene:GSBRNA2T00095473001 | GO:A0A078FW28 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 |
| PANTHER:PTHR32054:SF3 | PFAM:PF05701 | ProteinID:CDY17364 | ProteinID:CDY17364.1 | SEG:seg | UniParc:UPI0004EEFB41 |
| UniProt:A0A078FW28 | MapMan:35.1 | : | : | : | : |
Description
BnaA10g09980DBnaA10g09980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FW28]
Coordinates
chrLK032072:+:513742..516382
Molecular Weight (calculated)
72599.4 Da
IEP (calculated)
4.981
GRAVY (calculated)
-0.811
Length
653 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAKKGRRDS SDSSPSVEVG EIDTSSPFQS VKDAVSLFGR EAAFSAEKQP LLRKASPQSA EKVLVKQTEL HLAQKELNKL KDQLKSAETI REQALSELEW
101: AKRTVDELTR KLDAVNESRD SANKVTEAAK SLIKEAKPEN VSVSSSDDAE GLDMEQYGKV CKELDTAKQE LRKIRQVSNE VSETKTVALT KEEEAKEVTK
201: VYSEKIELLR KEIAAVNESV EQTKLACSQA QKEQSEIFAE KEIQHQSYKA GMEESAKKLL ALKSEFDPEF AKKLEAQLTE TYNEIDELQK QMETAKASDT
301: ESVNGVSLEL KEAKGLLEKL VGEEKSLQES VESLKAELEK VKTERSEVEG KEAEIETVAG DLNLKLSKSK SELEECVAEE GKAKAALEDM MSTLNQITSE
401: TEASRREADA MRNKAEELKK EAETAHLALE ETELNLRVAL DEAEEAKTAE AKALEQIKSM SEKTNAARNS TSSESGPQSI TLSQDEFKSL SKRAEVSDKL
501: ADMKVAAALA QVEAVRASEN ETLKKLETTQ EEIEKLKTAT EEALKKAAMA DAAKKAVEGE LRRWRERDQK KAEEAASRIL AEAEARMSVE SSPQHLYYKD
601: TKQKPVHKKK LEKTRTSVVS KKVLMPNLSG IFSRKKNQAE WGSPSYLPGE KPF
101: AKRTVDELTR KLDAVNESRD SANKVTEAAK SLIKEAKPEN VSVSSSDDAE GLDMEQYGKV CKELDTAKQE LRKIRQVSNE VSETKTVALT KEEEAKEVTK
201: VYSEKIELLR KEIAAVNESV EQTKLACSQA QKEQSEIFAE KEIQHQSYKA GMEESAKKLL ALKSEFDPEF AKKLEAQLTE TYNEIDELQK QMETAKASDT
301: ESVNGVSLEL KEAKGLLEKL VGEEKSLQES VESLKAELEK VKTERSEVEG KEAEIETVAG DLNLKLSKSK SELEECVAEE GKAKAALEDM MSTLNQITSE
401: TEASRREADA MRNKAEELKK EAETAHLALE ETELNLRVAL DEAEEAKTAE AKALEQIKSM SEKTNAARNS TSSESGPQSI TLSQDEFKSL SKRAEVSDKL
501: ADMKVAAALA QVEAVRASEN ETLKKLETTQ EEIEKLKTAT EEALKKAAMA DAAKKAVEGE LRRWRERDQK KAEEAASRIL AEAEARMSVE SSPQHLYYKD
601: TKQKPVHKKK LEKTRTSVVS KKVLMPNLSG IFSRKKNQAE WGSPSYLPGE KPF
001: MVAKKGRRDS SDSSPIVEVG EIDTSAPFQS VKDAVNLFGE AAFSAEKPVF RKPNPQSAEK VLVKQTELHL AQKELNKLKE QLKNAETIRE QALSELEWSK
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF
Arabidopsis Description
WEB family protein At5g55860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.