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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY17364 Canola nucleus 99.85 99.85
AT5G55860.1 Thale cress nucleus 86.52 87.06
Bra028956.1-P Field mustard nucleus 79.94 81.06
KRH75103 Soybean nucleus 21.29 57.92
VIT_19s0015g00740.t01 Wine grape nucleus 55.9 56.15
KRG98464 Soybean mitochondrion 55.28 55.28
KRH46399 Soybean cytosol 54.67 54.67
PGSC0003DMT400057359 Potato nucleus 56.36 54.52
Solyc07g065680.2.1 Tomato nucleus 55.9 54.07
GSMUA_Achr4P18510_001 Banana nucleus 45.94 48.94
GSMUA_Achr7P16580_001 Banana cytosol 45.64 48.38
KRH73920 Soybean nucleus 47.47 47.77
Os12t0271600-01 Rice plasma membrane 46.86 47.3
OQU79020 Sorghum nucleus 46.4 46.54
Zm00001d041088_P004 Maize nucleus 46.25 46.53
Zm00001d023629_P001 Maize nucleus 44.87 44.94
TraesCS5B01G103500.1 Wheat nucleus 43.49 44.44
TraesCS4A01G188200.1 Wheat nucleus 43.19 44.34
TraesCS4B01G127500.1 Wheat nucleus 43.03 44.32
TraesCS5A01G098800.2 Wheat cytosol 43.34 44.29
HORVU5Hr1G029890.1 Barley nucleus 43.64 44.19
TraesCS4D01G125200.1 Wheat nucleus 42.88 44.16
TraesCS5D01G110400.2 Wheat cytosol 42.57 43.51
GSMUA_AchrUn_... Banana nucleus 37.98 39.18
Bra016786.1-P Field mustard cytosol 30.78 36.75
Bra021064.1-P Field mustard cytosol 22.21 27.83
Bra026233.1-P Field mustard cytosol 22.21 27.83
Bra034308.1-P Field mustard nucleus 24.66 24.88
Bra041137.1-P Field mustard nucleus 18.99 22.1
Bra026987.1-P Field mustard cytosol 30.47 19.72
Bra033647.1-P Field mustard nucleus 21.75 19.69
Bra014049.1-P Field mustard nucleus 22.05 19.1
Bra040259.1-P Field mustard nucleus 19.75 17.62
Protein Annotations
EnsemblPlants:Bra002870.1EnsemblPlants:Bra002870.1-PEnsemblPlantsGene:Bra002870InterPro:Webncoils:CoilPANTHER:PTHR32054
PANTHER:PTHR32054:SF3PFAM:PF05701SEG:segUniParc:UPI0002544670UniProt:M4CF88MapMan:35.1
Description
AT5G55860 (E=6e-230) | unknown protein
Coordinates
chrA10:+:7045755..7047781
Molecular Weight (calculated)
72625.5 Da
IEP (calculated)
4.981
GRAVY (calculated)
-0.816
Length
653 amino acids
Sequence
(BLAST)
001: MVAKKGRRDS SDSSPSVEVG EIDTSSPFQS VKDAVSLFGR EAAFSAEKQP LLRKPSPQSA EKVLVKQTEL HLAQKELNKL KDQLKSAETI REQALSELEW
101: AKRTVDELTR KLDAVNESRD SANKVTEAAK SLIKEAKPEN VSVSSSDDAE GLDMEQYGKV CKELDTAKQE LRKIRQVSNE VSETKTVALT KEEEAKEVTK
201: VYSEKIELLR KEIAAVNESV EQTKLACSQA QKEQSEIFAE KEIQHQSYKA GMEESAKKLL ALKSEFDPEF AKKLEAQLTE TYNEIDELQK QMETAKASDT
301: ESVNGVSLEL KEAKGLLEKL VGEEKSLQES VESLKAELEK VKTERSEVEG KEAEIETVAG DLNLKLSKSK SELEECVAEE GKAKAALEDM MSTLNQITSE
401: TEASRREADA MRNKAEELKK EAETAHLALE ETELNLRVAL DEAEEAKTAE AKALEQIKSM SEKTNAARNS TSSESGPQSI TLSQDEFKSL SKRAEVSDKL
501: ADMKVAAALA QVEAVRASEN ETLKKLETTQ EEIEKLKTAT EEALKKAAMA DAAKKAVEGE LRRWRERDQK KAEEAASRIL AEAEARMSVE SSPQHLYYKD
601: TKQKPVHKKK LEKTRTSVVS KKVLMPNLSG IFSRKKNQAE WGSPSYLPGE KPF
Best Arabidopsis Sequence Match ( AT5G55860.1 )
(BLAST)
001: MVAKKGRRDS SDSSPIVEVG EIDTSAPFQS VKDAVNLFGE AAFSAEKPVF RKPNPQSAEK VLVKQTELHL AQKELNKLKE QLKNAETIRE QALSELEWSK
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF
Arabidopsis Description
WEB family protein At5g55860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.