Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36768 | Canola | nucleus | 94.57 | 94.42 |
| CDY11974 | Canola | cytosol, nucleus, plastid | 39.44 | 87.59 |
| Bra002870.1-P | Field mustard | nucleus | 81.06 | 79.94 |
| AT5G55860.1 | Thale cress | nucleus | 79.66 | 79.04 |
| KRH75103 | Soybean | nucleus | 20.03 | 53.75 |
| VIT_19s0015g00740.t01 | Wine grape | nucleus | 52.48 | 52.0 |
| KRG98464 | Soybean | mitochondrion | 52.02 | 51.3 |
| KRH46399 | Soybean | cytosol | 51.24 | 50.54 |
| PGSC0003DMT400057359 | Potato | nucleus | 52.64 | 50.22 |
| Solyc07g065680.2.1 | Tomato | nucleus | 52.02 | 49.63 |
| GSMUA_Achr7P16580_001 | Banana | cytosol | 45.65 | 47.73 |
| GSMUA_Achr4P18510_001 | Banana | nucleus | 44.57 | 46.82 |
| KRH73920 | Soybean | nucleus | 45.5 | 45.15 |
| Os12t0271600-01 | Rice | plasma membrane | 45.03 | 44.82 |
| OQU79020 | Sorghum | nucleus | 44.41 | 43.93 |
| Zm00001d041088_P004 | Maize | nucleus | 44.1 | 43.76 |
| TraesCS4A01G188200.1 | Wheat | nucleus | 42.39 | 42.92 |
| TraesCS4B01G127500.1 | Wheat | nucleus | 42.24 | 42.9 |
| Zm00001d023629_P001 | Maize | nucleus | 43.32 | 42.79 |
| TraesCS4D01G125200.1 | Wheat | nucleus | 42.08 | 42.74 |
| HORVU5Hr1G029890.1 | Barley | nucleus | 42.55 | 42.48 |
| TraesCS5B01G103500.1 | Wheat | nucleus | 42.08 | 42.41 |
| TraesCS5A01G098800.2 | Wheat | cytosol | 41.46 | 41.78 |
| TraesCS5D01G110400.2 | Wheat | cytosol | 40.68 | 41.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.65 | 37.28 |
| Bra016786.1-P | Field mustard | cytosol | 30.75 | 36.2 |
| Bra021064.1-P | Field mustard | cytosol | 21.27 | 26.3 |
| Bra026233.1-P | Field mustard | cytosol | 20.81 | 25.72 |
| Bra034308.1-P | Field mustard | nucleus | 23.6 | 23.49 |
| Bra041137.1-P | Field mustard | nucleus | 18.63 | 21.39 |
| Bra026987.1-P | Field mustard | cytosol | 29.81 | 19.03 |
| Bra033647.1-P | Field mustard | nucleus | 21.12 | 18.86 |
| Bra014049.1-P | Field mustard | nucleus | 20.96 | 17.9 |
| Bra040259.1-P | Field mustard | nucleus | 19.57 | 17.21 |
Protein Annotations
Description
AT5G55860 (E=2e-212) | unknown protein
Coordinates
chrA03:-:5588267..5590284
Molecular Weight (calculated)
71606.4 Da
IEP (calculated)
5.121
GRAVY (calculated)
-0.756
Length
644 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAKKGRQDS SPSVEVGEID TSAPFQSVKH AVNLFGEAAL SADKHPLIRK PTPHSAEKVL VNQTELHLAE KELNKLKEQV NHAETVREQA LSELDWAKRS
101: VDELTRKLET VNESRDSANK VTEAAKSQIK EAKPDTVSVS STDEYVMVCK ELDAAKQELR KIRQVSNEVS DTNTVALTKE EEAKEVTKVS SDKIELLKKE
201: ISAVNESVEQ TKLACSQSRK EQSETFSEKE IQQLTYKAGM EESAKKLLAL KKEFDPEFAK KLEAQLSETY NEIDELQKQM ETVKASSDEA SVNGVSLELN
301: EAKGLLEKFV EEEKSLRESV ESLKEELKNV KIKRSKVEAK EAEIESVAGE LNLKLSKGKS ELEECVGEET KAKAALEDMM STLNQISSET EAARREAEEM
401: RNEAERLVKE AETAHLSLEE TELNLRVALD EAEEAKAAEA KALEEIKSLS EKPDAVRKST SSESGEAQSI TLSQEELNSL RKRAEVVDKL AGMKVAAAVA
501: QVDAVRASEN ETVKKFETTQ EEIVKIKTAT EEALKKAAMA DAAKKAVEGE LRRWRERDQK KAEEVASRIL AEAEAKMSAE SSSPQHHHYK ATTKQKPINM
601: KLEKTKTSVV SKKVLLPNLS GIFNRKKNQV EWGSPSYLPG EKSI
101: VDELTRKLET VNESRDSANK VTEAAKSQIK EAKPDTVSVS STDEYVMVCK ELDAAKQELR KIRQVSNEVS DTNTVALTKE EEAKEVTKVS SDKIELLKKE
201: ISAVNESVEQ TKLACSQSRK EQSETFSEKE IQQLTYKAGM EESAKKLLAL KKEFDPEFAK KLEAQLSETY NEIDELQKQM ETVKASSDEA SVNGVSLELN
301: EAKGLLEKFV EEEKSLRESV ESLKEELKNV KIKRSKVEAK EAEIESVAGE LNLKLSKGKS ELEECVGEET KAKAALEDMM STLNQISSET EAARREAEEM
401: RNEAERLVKE AETAHLSLEE TELNLRVALD EAEEAKAAEA KALEEIKSLS EKPDAVRKST SSESGEAQSI TLSQEELNSL RKRAEVVDKL AGMKVAAAVA
501: QVDAVRASEN ETVKKFETTQ EEIVKIKTAT EEALKKAAMA DAAKKAVEGE LRRWRERDQK KAEEVASRIL AEAEAKMSAE SSSPQHHHYK ATTKQKPINM
601: KLEKTKTSVV SKKVLLPNLS GIFNRKKNQV EWGSPSYLPG EKSI
001: MVAKKGRRDS SDSSPIVEVG EIDTSAPFQS VKDAVNLFGE AAFSAEKPVF RKPNPQSAEK VLVKQTELHL AQKELNKLKE QLKNAETIRE QALSELEWSK
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF
101: RTVDELTRKL EAVNESRDSA NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL ETKTVALSKV EEAKKVSKVH
201: SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
301: VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE
401: AARREAEGMR NKAKELMKEA ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL SQEEFKSLSK RAEVFDKLAE
501: MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
601: KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF
Arabidopsis Description
WEB family protein At5g55860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.