Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033647.1-P | Field mustard | nucleus | 97.5 | 97.23 |
| Bra041137.1-P | Field mustard | nucleus | 71.07 | 91.09 |
| CDX71526 | Canola | nucleus | 83.17 | 82.6 |
| AT5G42880.1 | Thale cress | nucleus | 69.68 | 66.71 |
| CDY43212 | Canola | nucleus | 50.63 | 50.98 |
| CDY17054 | Canola | nucleus | 49.37 | 50.0 |
| Solyc05g042150.1.1 | Tomato | cytosol | 13.21 | 49.48 |
| CDY62582 | Canola | nucleus | 50.35 | 49.45 |
| CDY17108 | Canola | nucleus | 49.93 | 49.11 |
| Solyc07g026880.1.1 | Tomato | cytosol | 10.43 | 48.7 |
| CDX77048 | Canola | nucleus | 46.18 | 43.86 |
| CDY46119 | Canola | nucleus | 41.03 | 43.45 |
| CDY48180 | Canola | nucleus | 44.51 | 43.36 |
| Solyc04g078950.1.1 | Tomato | nucleus | 17.8 | 41.97 |
| CDX72400 | Canola | nucleus | 39.64 | 41.91 |
| CDX68971 | Canola | mitochondrion, nucleus, plastid | 44.37 | 39.58 |
| VIT_18s0001g10560.t01 | Wine grape | nucleus | 46.45 | 39.57 |
| Solyc07g022910.2.1 | Tomato | plastid | 45.62 | 38.72 |
| KRH07566 | Soybean | nucleus | 33.1 | 38.7 |
| PGSC0003DMT400039921 | Potato | nucleus | 44.78 | 37.62 |
| KRH45361 | Soybean | nucleus | 30.6 | 37.54 |
| Solyc12g088830.1.1 | Tomato | nucleus | 43.95 | 37.49 |
| PGSC0003DMT400011385 | Potato | nucleus | 45.76 | 36.43 |
| TraesCS1D01G248300.1 | Wheat | nucleus, plastid | 36.02 | 36.12 |
| HORVU2Hr1G030630.1 | Barley | nucleus | 38.53 | 34.93 |
| TraesCS2A01G166400.1 | Wheat | cytosol | 38.25 | 34.68 |
| GSMUA_Achr6P10120_001 | Banana | nucleus | 42.28 | 34.66 |
| Os03t0395300-01 | Rice | plasma membrane | 37.13 | 34.41 |
| TraesCS2B01G192300.1 | Wheat | nucleus | 39.78 | 34.01 |
| TraesCS1B01G259500.1 | Wheat | nucleus | 35.74 | 33.64 |
| TraesCS2D01G173700.1 | Wheat | nucleus | 38.94 | 33.29 |
| GSMUA_Achr10P... | Banana | cytosol | 37.69 | 33.25 |
| GSMUA_Achr9P27100_001 | Banana | nucleus | 37.97 | 33.21 |
| TraesCS1A01G248800.1 | Wheat | nucleus | 36.02 | 33.21 |
| GSMUA_Achr5P17590_001 | Banana | nucleus | 37.83 | 33.17 |
| Solyc08g015840.1.1 | Tomato | cytosol | 9.04 | 33.16 |
| PGSC0003DMT400020677 | Potato | nucleus | 44.37 | 32.89 |
| Zm00001d022161_P001 | Maize | nucleus | 36.44 | 32.75 |
| Zm00001d029420_P002 | Maize | nucleus | 35.6 | 32.65 |
| KRH51982 | Soybean | nucleus | 43.12 | 32.53 |
| KXG36701 | Sorghum | nucleus | 37.27 | 32.48 |
| KRH15355 | Soybean | nucleus | 45.48 | 32.38 |
| Zm00001d047240_P002 | Maize | nucleus | 35.33 | 32.36 |
| KRH61284 | Soybean | nucleus | 43.67 | 32.27 |
| EER92167 | Sorghum | nucleus | 35.19 | 32.27 |
| Os07t0619100-01 | Rice | plasma membrane | 36.44 | 32.07 |
| GSMUA_Achr5P24580_001 | Banana | cytosol | 26.98 | 30.89 |
| HORVU1Hr1G062330.8 | Barley | nucleus | 36.72 | 29.2 |
| Os06t0314000-01 | Rice | cytosol, nucleus | 20.03 | 28.46 |
| TraesCS4B01G300400.1 | Wheat | nucleus | 29.9 | 24.86 |
| CDY42964 | Canola | cytosol | 16.55 | 22.88 |
| CDY21038 | Canola | cytosol | 16.97 | 22.3 |
| CDY31245 | Canola | cytosol | 16.83 | 22.08 |
| CDY35594 | Canola | nucleus | 15.99 | 21.99 |
| CDX90485 | Canola | cytosol | 16.13 | 21.89 |
| CDY28631 | Canola | nucleus | 19.75 | 21.78 |
| CDY50127 | Canola | cytosol | 15.72 | 21.61 |
| CDY17364 | Canola | nucleus | 19.61 | 21.59 |
| CDY58167 | Canola | cytosol | 15.58 | 21.54 |
| CDY09639 | Canola | cytosol | 15.86 | 21.47 |
| CDY11973 | Canola | nucleus | 19.19 | 21.46 |
| CDY36768 | Canola | nucleus | 18.92 | 21.09 |
| CDY11974 | Canola | cytosol, nucleus, plastid | 7.65 | 18.97 |
| CDY15972 | Canola | cytosol | 17.66 | 14.16 |
| CDY26542 | Canola | cytosol | 18.78 | 13.38 |
| CDY35593 | Canola | cytosol | 5.29 | 11.28 |
Protein Annotations
| EnsemblPlants:CDY22380 | EnsemblPlantsGene:GSBRNA2T00018866001 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF2 |
| PFAM:PF05701 | ProteinID:CDY22380 | ProteinID:CDY22380.1 | SEG:seg | UniParc:UPI0004EF0BBE | UniProt:A0A078G7B4 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA06g37020DBnaA06g37020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G7B4]
Coordinates
chrLK032130:-:413648..416135
Molecular Weight (calculated)
81405.1 Da
IEP (calculated)
4.489
GRAVY (calculated)
-0.861
Length
719 amino acids
Sequence
(BLAST)
(BLAST)
001: MSADDDKDSD DLNIFLNAIG EDEEAPMRKS TNEEDIFFNL DDGEGDLHNP FQDLSDSNQP VFESPEVYVA PRVMISHQDS FSEEEGSRIE DARILPFSPR
101: LRVPASPRAF VYQRSVESPR FGLIDTASPF ESVKDAVSKF GGITDWKAHK IQTIERRKMV DEELEKIQEA LPEYKRESEL AEEAKHDALR ELETTKGLIE
201: ELKLELEKAQ LEEQQAKQDS ELAQMRVEEM EKGVANEASV AVKAQLEVAK ARQESATCEL RSVREEIEMV CNEYEDMLRE KDLAAERAEA AVKEAKEIER
301: EMDGLSIELI ATKESLESAH TAHLEAEEKR FGAAMGRDQD MYNWEKELKM VEDDIERLNQ ETRAADDMKT RLDAASALEY DLRAELAAFT ESSTRMGNDD
401: NIHAAVDSAK RELEEVKSNI EKAASEVKAL KIIAGSLQSE LARERQDLAE TKERQSTAGG LVRTSDEEAR EELMDTSNKF EEAMKEAEDA KLLAAAARDE
501: LRMAEELSEQ AKTGMSTIEN RLTEAKKEME AARASEKLAL AAIKALQETE SSQRFEEMSN SPRSIIISVE EYYELSKQAH ESEEEANTKL SQIVSQIEVA
601: KEEESRILEK LEEVNREMSV RKGELKAAMG KAEKARDGKL SMEQELRKWR SENGKRRTEE GMEPEKSPTR SSTFAFGEQG TSSNIDNNNV TPETKKKKKK
701: KLSLLPKVLM FLSRKKSHK
101: LRVPASPRAF VYQRSVESPR FGLIDTASPF ESVKDAVSKF GGITDWKAHK IQTIERRKMV DEELEKIQEA LPEYKRESEL AEEAKHDALR ELETTKGLIE
201: ELKLELEKAQ LEEQQAKQDS ELAQMRVEEM EKGVANEASV AVKAQLEVAK ARQESATCEL RSVREEIEMV CNEYEDMLRE KDLAAERAEA AVKEAKEIER
301: EMDGLSIELI ATKESLESAH TAHLEAEEKR FGAAMGRDQD MYNWEKELKM VEDDIERLNQ ETRAADDMKT RLDAASALEY DLRAELAAFT ESSTRMGNDD
401: NIHAAVDSAK RELEEVKSNI EKAASEVKAL KIIAGSLQSE LARERQDLAE TKERQSTAGG LVRTSDEEAR EELMDTSNKF EEAMKEAEDA KLLAAAARDE
501: LRMAEELSEQ AKTGMSTIEN RLTEAKKEME AARASEKLAL AAIKALQETE SSQRFEEMSN SPRSIIISVE EYYELSKQAH ESEEEANTKL SQIVSQIEVA
601: KEEESRILEK LEEVNREMSV RKGELKAAMG KAEKARDGKL SMEQELRKWR SENGKRRTEE GMEPEKSPTR SSTFAFGEQG TSSNIDNNNV TPETKKKKKK
701: KLSLLPKVLM FLSRKKSHK
001: MLGDDKDSDD LNLFLNAIGE AGDEEGPTSF NDIDFLTFDD EDLHNPFQDC ETSPINEPPK VYVAPRVMIS HQDSFSEDSR TDVIEDARIL PASPRLRVPA
101: SPRAFVYPRS VESPRFGSPR SVESPCFGSP IGVIDTASPF ESVREAVSKF GGITDWKAHK IQTIERRKMV DEELEKIQEA MPEYKREAEL AEEAKYDALE
201: ELENTKGLIE ELKLELEKAE KEEQQAKQDS ELAQMRVEEM EKGVANEASV AVKTQLEVAK ARQVSATSEL RSVREEIEMV SNEYKDMLRE KELAAERADI
301: AVLEAKEIER TMDGLSIELI ATKELLESVH TAHLEAEEKR FSVAMARDQD VYNWEKELKM VENDIERLNQ EVRAADDVKA KLETASALQH DLKTELAAFT
401: DISSGNLLLE KNDIHAAVES ARRELEEVKA NIEKAASEVK KLKIIAGSLQ SELGRERQDL EETKQKESTG LARTNDKDAG EELVETAKKL EQATKEAEDA
501: KALATASRDE LRMAKELSEQ AKRGMSTIES RLVEAKKEME AARASEKLAL AAIKALQETE SSQRFEEINN SPRSIIISVE EYYELSKQAL ESEEEANTRL
601: SEIVSQIEVA KEEESRILEK LEEVNREMSV RKAELKEANG KAEKARDGKL GMEQELRKWR SENGKRRTDE GREPEKSPTR SSTEGRNKEN GFGQSKSFAF
701: GEQGSSSNNT GGSTTTNNNN LTPETKKKKK KLSLFPKVFM FLSRKKSHSH K
101: SPRAFVYPRS VESPRFGSPR SVESPCFGSP IGVIDTASPF ESVREAVSKF GGITDWKAHK IQTIERRKMV DEELEKIQEA MPEYKREAEL AEEAKYDALE
201: ELENTKGLIE ELKLELEKAE KEEQQAKQDS ELAQMRVEEM EKGVANEASV AVKTQLEVAK ARQVSATSEL RSVREEIEMV SNEYKDMLRE KELAAERADI
301: AVLEAKEIER TMDGLSIELI ATKELLESVH TAHLEAEEKR FSVAMARDQD VYNWEKELKM VENDIERLNQ EVRAADDVKA KLETASALQH DLKTELAAFT
401: DISSGNLLLE KNDIHAAVES ARRELEEVKA NIEKAASEVK KLKIIAGSLQ SELGRERQDL EETKQKESTG LARTNDKDAG EELVETAKKL EQATKEAEDA
501: KALATASRDE LRMAKELSEQ AKRGMSTIES RLVEAKKEME AARASEKLAL AAIKALQETE SSQRFEEINN SPRSIIISVE EYYELSKQAL ESEEEANTRL
601: SEIVSQIEVA KEEESRILEK LEEVNREMSV RKAELKEANG KAEKARDGKL GMEQELRKWR SENGKRRTDE GREPEKSPTR SSTEGRNKEN GFGQSKSFAF
701: GEQGSSSNNT GGSTTTNNNN LTPETKKKKK KLSLFPKVFM FLSRKKSHSH K
Arabidopsis Description
WEL3Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMN1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.