Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os03t0395300-01 | |
| Os06t0314000-01 | |
| Os07t0619100-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G26570.1 | Os03t0395300-01 | AT2G26570.1 | 20974974 |
| AT2G26570.1 | Os06t0314000-01 | AT2G26570.1 | 20974974 |
| AT2G26570.1 | Os07t0619100-01 | AT2G26570.1 | 20974974 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G259500.1 | Wheat | nucleus | 59.79 | 60.73 |
| EER92167 | Sorghum | nucleus | 60.95 | 60.33 |
| TraesCS1D01G248300.1 | Wheat | nucleus, plastid | 55.67 | 60.25 |
| Zm00001d029420_P002 | Maize | nucleus | 60.7 | 60.08 |
| Zm00001d047240_P002 | Maize | nucleus | 60.57 | 59.87 |
| TraesCS1A01G248800.1 | Wheat | nucleus | 59.54 | 59.23 |
| HORVU1Hr1G062330.8 | Barley | nucleus | 60.82 | 52.21 |
| Os07t0619100-01 | Rice | plasma membrane | 52.19 | 49.57 |
| Bra034308.1-P | Field mustard | nucleus | 40.72 | 48.84 |
| Solyc05g042150.1.1 | Tomato | cytosol | 11.73 | 47.4 |
| Solyc04g078950.1.1 | Tomato | nucleus | 18.04 | 45.9 |
| CDY48180 | Canola | nucleus | 42.14 | 44.31 |
| CDX77048 | Canola | nucleus | 42.53 | 43.59 |
| Solyc07g026880.1.1 | Tomato | cytosol | 8.63 | 43.51 |
| AT2G26570.1 | Thale cress | nucleus | 44.59 | 42.87 |
| VIT_18s0001g10560.t01 | Wine grape | nucleus | 46.52 | 42.77 |
| GSMUA_Achr6P10120_001 | Banana | nucleus | 48.2 | 42.65 |
| AT4G33390.1 | Thale cress | nucleus | 42.4 | 42.23 |
| CDX72400 | Canola | nucleus | 36.21 | 41.32 |
| Solyc07g022910.2.1 | Tomato | plastid | 45.1 | 41.32 |
| PGSC0003DMT400039921 | Potato | nucleus | 44.97 | 40.77 |
| CDY46119 | Canola | nucleus | 35.31 | 40.35 |
| Bra041137.1-P | Field mustard | nucleus | 28.99 | 40.11 |
| KRH07566 | Soybean | nucleus | 31.57 | 39.84 |
| GSMUA_Achr5P17590_001 | Banana | nucleus | 41.49 | 39.27 |
| Solyc12g088830.1.1 | Tomato | nucleus | 42.53 | 39.15 |
| GSMUA_Achr10P... | Banana | cytosol | 40.98 | 39.02 |
| PGSC0003DMT400011385 | Potato | nucleus | 45.23 | 38.87 |
| CDX68971 | Canola | mitochondrion, nucleus, plastid | 40.34 | 38.83 |
| KRH45361 | Soybean | nucleus | 28.99 | 38.4 |
| CDY22380 | Canola | nucleus | 34.41 | 37.13 |
| Bra033647.1-P | Field mustard | nucleus | 34.41 | 37.03 |
| Os06t0314000-01 | Rice | cytosol, nucleus | 23.97 | 36.76 |
| CDX71526 | Canola | nucleus | 33.51 | 35.91 |
| CDY17054 | Canola | nucleus | 32.47 | 35.49 |
| CDY43212 | Canola | nucleus | 32.6 | 35.43 |
| Solyc08g015840.1.1 | Tomato | cytosol | 8.89 | 35.2 |
| AT1G45545.2 | Thale cress | nucleus | 33.89 | 34.93 |
| AT5G42880.1 | Thale cress | nucleus | 33.76 | 34.89 |
| KRH51982 | Soybean | nucleus | 42.53 | 34.63 |
| PGSC0003DMT400020677 | Potato | nucleus | 43.04 | 34.43 |
| Bra014049.1-P | Field mustard | nucleus | 33.25 | 34.22 |
| CDY17108 | Canola | nucleus | 32.09 | 34.06 |
| CDY62582 | Canola | nucleus | 32.09 | 34.02 |
| Bra040259.1-P | Field mustard | nucleus | 31.83 | 33.74 |
| KRH61284 | Soybean | nucleus | 41.49 | 33.09 |
| KRH15355 | Soybean | nucleus | 41.62 | 31.98 |
| Os09t0458000-00 | Rice | plasma membrane | 28.35 | 26.35 |
| Os12t0271600-01 | Rice | plasma membrane | 21.13 | 25.35 |
Protein Annotations
| MapMan:20.5.8.1 | EntrezGene:4333035 | ProteinID:AAK52548.1 | ProteinID:ABF96416.1 | EMBL:AK100564 | ProteinID:BAF12206.1 |
| ProteinID:BAS84557.1 | ncoils:Coil | ProteinID:EAZ27208.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0008150 | GO:GO:0009903 | GO:GO:0009904 | GO:GO:0009987 |
| GO:GO:0016043 | EnsemblPlantsGene:Os03g0395300 | EnsemblPlants:Os03t0395300-01 | PFAM:PF05701 | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF2 |
| UniProt:Q94LH1 | UniParc:UPI00000A728B | InterPro:Web | RefSeq:XP_015632453.1 | SEG:seg | : |
Description
Protein of unknown function DUF827, plant family protein. (Os03t0395300-01)
Coordinates
chr3:-:15939151..15943342
Molecular Weight (calculated)
86997.0 Da
IEP (calculated)
5.001
GRAVY (calculated)
-0.871
Length
776 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVLNTNDHG TARTRDGEET ASVPVENPDS SHEMEKKLTH NLTENGQAPT GHTVPSLPDT VSKLKPAQES DDSLKDKTDL PTSTSKTEVN NISENGSTNQ
101: STMLSDESRT KEDKMNHHEN IAATTNKKAE TDARPESPYR GLIDTAAPFE SVREAVTKFG GIVDWKAYRS QTLERRRVMQ LELEKAQQEI PQFKQDSEAC
201: EMAKLQVVEE LGRTRRLVEE LKHKLERAEI DVDQAKQDSE LAQLRAQEME QGIDDEASVI AQTQLAVAKE RHQKAVDELK LVKEEMRSTH EKHTVLASER
301: DIAAKRAEQA ISAAKETEKR VEELTLELIA IKESLESAHA AHHEAEEHKL GAALAKEQDC LAWEKELQQA QEELQQLNMQ LVSKTDAKSK IDENTHMLQI
401: LSKELAAYTE NKMSEEAGVI EEDGSDEAKE ISRSIKRALA STRKELEGVR GNIEKAKDET NLIRAIAESI KSEVDKEKAS LVTLQQREGM ASIAVSSLEA
501: ELNRTKEEIE MVYIKEAETR EKMAELPKML QQAAQEAEDA KVAPHSAQEE LRKAKEEAEQ TKAAAATAEI RLRAVLKEIE ASKASEKLAL VAAQALQESE
601: ETSSVEDSPR TITLPISEYH SLSKRVYEAE ELANERVAAA LAQIELAKES ETRTLERLQQ ETKEMHKKKD ALQIALQRAD RAKEGKLGAE QELRKWRAEL
701: EQRRKAAKHV ANPWTAPPIR SPEQKGSYKE DDAVLTEPNS PMSNSSTDDF VVDQKLRKKK TFFPQMSSIL SRKAQT
101: STMLSDESRT KEDKMNHHEN IAATTNKKAE TDARPESPYR GLIDTAAPFE SVREAVTKFG GIVDWKAYRS QTLERRRVMQ LELEKAQQEI PQFKQDSEAC
201: EMAKLQVVEE LGRTRRLVEE LKHKLERAEI DVDQAKQDSE LAQLRAQEME QGIDDEASVI AQTQLAVAKE RHQKAVDELK LVKEEMRSTH EKHTVLASER
301: DIAAKRAEQA ISAAKETEKR VEELTLELIA IKESLESAHA AHHEAEEHKL GAALAKEQDC LAWEKELQQA QEELQQLNMQ LVSKTDAKSK IDENTHMLQI
401: LSKELAAYTE NKMSEEAGVI EEDGSDEAKE ISRSIKRALA STRKELEGVR GNIEKAKDET NLIRAIAESI KSEVDKEKAS LVTLQQREGM ASIAVSSLEA
501: ELNRTKEEIE MVYIKEAETR EKMAELPKML QQAAQEAEDA KVAPHSAQEE LRKAKEEAEQ TKAAAATAEI RLRAVLKEIE ASKASEKLAL VAAQALQESE
601: ETSSVEDSPR TITLPISEYH SLSKRVYEAE ELANERVAAA LAQIELAKES ETRTLERLQQ ETKEMHKKKD ALQIALQRAD RAKEGKLGAE QELRKWRAEL
701: EQRRKAAKHV ANPWTAPPIR SPEQKGSYKE DDAVLTEPNS PMSNSSTDDF VVDQKLRKKK TFFPQMSSIL SRKAQT
001: MEDLKTVEAS DNVVSDNVEK VNPELIDSTI RESNIQSATK VDNIPQSQTD TEETQQSQTD TEETQQSQTD DTTGNAKIYV DDTFSPSDAA TAAVLTGKDS
101: TSTTIVEEVM EPDEIGLPSV KITEAATGTA RNGGGSPRTV SSPRFSGSPV STGTPKNVDS HRGLIDTAAP FESVKEAVSK FGGITDWKSH RMQAVERRKL
201: IEEELKKIHE EIPEYKTHSE TAEAAKLQVL KELESTKRLI EQLKLNLDKA QTEEQQAKQD SELAKLRVEE MEQGIAEDVS VAAKAQLEVA KARHTTAITE
301: LSSVKEELET LHKEYDALVQ DKDVAVKKVE EAMLASKEVE KTVEELTIEL IATKESLESA HASHLEAEEQ RIGAAMARDQ DTHRWEKELK QAEEELQRLN
401: QQIHSSKDLK SKLDTASALL LDLKAELVAY MESKLKQEAC DSTTNTDPST ENMSHPDLHA AVASAKKELE EVNVNIEKAA AEVSCLKLAS SSLQLELEKE
501: KSTLASIKQR EGMASIAVAS IEAEIDRTRS EIASVQSKEK DAREKMVELP KQLQQAAEEA DEAKSLAEVA REELRKAKEE AEQAKAGAST MESRLFAAQK
601: EIEAAKASER LALAAIKALE ESESTLKAND TDSPRSVTLS LEEYYELSKR AHEAEELANA RVAAAVSRIE EAKETEMRSL EKLEEVNRDM DARKKALKEA
701: TEKAEKAKEG KLGVEQELRK WRAEHEQKRK AGDGVNTEKN LKESFEGGKM EQSPEAVVYA SSPSESYGTE ENSETNLSPQ TKSRKKKKKL SFPRFFMFLS
801: KKKSHNN
101: TSTTIVEEVM EPDEIGLPSV KITEAATGTA RNGGGSPRTV SSPRFSGSPV STGTPKNVDS HRGLIDTAAP FESVKEAVSK FGGITDWKSH RMQAVERRKL
201: IEEELKKIHE EIPEYKTHSE TAEAAKLQVL KELESTKRLI EQLKLNLDKA QTEEQQAKQD SELAKLRVEE MEQGIAEDVS VAAKAQLEVA KARHTTAITE
301: LSSVKEELET LHKEYDALVQ DKDVAVKKVE EAMLASKEVE KTVEELTIEL IATKESLESA HASHLEAEEQ RIGAAMARDQ DTHRWEKELK QAEEELQRLN
401: QQIHSSKDLK SKLDTASALL LDLKAELVAY MESKLKQEAC DSTTNTDPST ENMSHPDLHA AVASAKKELE EVNVNIEKAA AEVSCLKLAS SSLQLELEKE
501: KSTLASIKQR EGMASIAVAS IEAEIDRTRS EIASVQSKEK DAREKMVELP KQLQQAAEEA DEAKSLAEVA REELRKAKEE AEQAKAGAST MESRLFAAQK
601: EIEAAKASER LALAAIKALE ESESTLKAND TDSPRSVTLS LEEYYELSKR AHEAEELANA RVAAAVSRIE EAKETEMRSL EKLEEVNRDM DARKKALKEA
701: TEKAEKAKEG KLGVEQELRK WRAEHEQKRK AGDGVNTEKN LKESFEGGKM EQSPEAVVYA SSPSESYGTE ENSETNLSPQ TKSRKKKKKL SFPRFFMFLS
801: KKKSHNN
Arabidopsis Description
WEB1WEB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VMR8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.