Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034308.1-P | Field mustard | nucleus | 61.71 | 76.97 |
| CDY48180 | Canola | nucleus | 63.44 | 69.38 |
| CDX77048 | Canola | nucleus | 63.69 | 67.9 |
| Solyc05g042150.1.1 | Tomato | cytosol | 14.75 | 61.98 |
| Solyc07g026880.1.1 | Tomato | cytosol | 11.28 | 59.09 |
| AT4G33390.1 | Thale cress | nucleus | 56.51 | 58.54 |
| Solyc04g078950.1.1 | Tomato | nucleus | 21.56 | 57.05 |
| VIT_18s0001g10560.t01 | Wine grape | nucleus | 56.51 | 54.03 |
| PGSC0003DMT400039921 | Potato | nucleus | 52.79 | 49.77 |
| KRH07566 | Soybean | nucleus | 37.92 | 49.76 |
| Solyc07g022910.2.1 | Tomato | plastid | 51.67 | 49.23 |
| Solyc12g088830.1.1 | Tomato | nucleus | 50.93 | 48.75 |
| PGSC0003DMT400011385 | Potato | nucleus | 54.4 | 48.62 |
| KRH45361 | Soybean | nucleus | 34.7 | 47.78 |
| KRH51982 | Soybean | nucleus | 53.78 | 45.54 |
| AT5G42880.1 | Thale cress | nucleus | 42.38 | 45.54 |
| TraesCS1D01G248300.1 | Wheat | nucleus, plastid | 39.9 | 44.91 |
| Solyc08g015840.1.1 | Tomato | cytosol | 10.9 | 44.9 |
| KRH61284 | Soybean | nucleus | 53.9 | 44.71 |
| Os03t0395300-01 | Rice | plasma membrane | 42.87 | 44.59 |
| GSMUA_Achr6P10120_001 | Banana | nucleus | 48.08 | 44.24 |
| AT1G45545.2 | Thale cress | nucleus | 41.26 | 44.22 |
| HORVU2Hr1G030630.1 | Barley | nucleus | 43.37 | 44.14 |
| PGSC0003DMT400020677 | Potato | nucleus | 52.79 | 43.92 |
| TraesCS2A01G166400.1 | Wheat | cytosol | 43.12 | 43.88 |
| TraesCS2B01G192300.1 | Wheat | nucleus | 44.11 | 42.33 |
| GSMUA_Achr5P17590_001 | Banana | nucleus | 42.87 | 42.2 |
| TraesCS2D01G173700.1 | Wheat | nucleus | 43.74 | 41.97 |
| TraesCS1B01G259500.1 | Wheat | nucleus | 39.65 | 41.88 |
| GSMUA_Achr10P... | Banana | cytosol | 42.26 | 41.84 |
| KRH15355 | Soybean | nucleus | 52.29 | 41.78 |
| GSMUA_Achr9P27100_001 | Banana | nucleus | 42.38 | 41.61 |
| Zm00001d029420_P002 | Maize | nucleus | 40.4 | 41.58 |
| TraesCS1A01G248800.1 | Wheat | nucleus | 40.02 | 41.41 |
| KXG36701 | Sorghum | nucleus | 42.26 | 41.33 |
| EER92167 | Sorghum | nucleus | 39.9 | 41.07 |
| Zm00001d047240_P002 | Maize | nucleus | 39.65 | 40.76 |
| Zm00001d022161_P001 | Maize | nucleus | 39.9 | 40.25 |
| Os07t0619100-01 | Rice | plasma membrane | 40.02 | 39.53 |
| Os06t0314000-01 | Rice | cytosol, nucleus | 24.16 | 38.54 |
| GSMUA_Achr5P24580_001 | Banana | cytosol | 28.87 | 37.1 |
| HORVU1Hr1G062330.8 | Barley | nucleus | 40.77 | 36.39 |
| TraesCS4B01G300400.1 | Wheat | nucleus | 33.71 | 31.45 |
| AT5G55860.1 | Thale cress | nucleus | 20.69 | 25.73 |
| AT1G12150.2 | Thale cress | cytosol | 16.11 | 23.72 |
| AT4G17210.1 | Thale cress | cytosol, plastid | 14.75 | 22.58 |
Protein Annotations
| MapMan:20.5.8.1 | EntrezGene:817198 | UniProt:A0A178VMR8 | ProteinID:AAC14505.1 | ProteinID:AEC07859.1 | EMBL:AK228775 |
| ProteinID:ANM63180.1 | ArrayExpress:AT2G26570 | EnsemblPlantsGene:AT2G26570 | RefSeq:AT2G26570 | TAIR:AT2G26570 | RefSeq:AT2G26570-TAIR-G |
| EnsemblPlants:AT2G26570.1 | TAIR:AT2G26570.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005886 |
| GO:GO:0008150 | GO:GO:0009903 | GO:GO:0009904 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 |
| RefSeq:NP_001325286.1 | RefSeq:NP_180225.1 | UniProt:O48724 | ProteinID:OAP07770.1 | PFAM:PF05701 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF2 | UniParc:UPI00000A832E | Symbol:WEB1 |
| InterPro:Web | SEG:seg | : | : | : | : |
Description
WEB1WEB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VMR8]
Coordinates
chr2:+:11298914..11302319
Molecular Weight (calculated)
89299.0 Da
IEP (calculated)
4.715
GRAVY (calculated)
-0.803
Length
807 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDLKTVEAS DNVVSDNVEK VNPELIDSTI RESNIQSATK VDNIPQSQTD TEETQQSQTD TEETQQSQTD DTTGNAKIYV DDTFSPSDAA TAAVLTGKDS
101: TSTTIVEEVM EPDEIGLPSV KITEAATGTA RNGGGSPRTV SSPRFSGSPV STGTPKNVDS HRGLIDTAAP FESVKEAVSK FGGITDWKSH RMQAVERRKL
201: IEEELKKIHE EIPEYKTHSE TAEAAKLQVL KELESTKRLI EQLKLNLDKA QTEEQQAKQD SELAKLRVEE MEQGIAEDVS VAAKAQLEVA KARHTTAITE
301: LSSVKEELET LHKEYDALVQ DKDVAVKKVE EAMLASKEVE KTVEELTIEL IATKESLESA HASHLEAEEQ RIGAAMARDQ DTHRWEKELK QAEEELQRLN
401: QQIHSSKDLK SKLDTASALL LDLKAELVAY MESKLKQEAC DSTTNTDPST ENMSHPDLHA AVASAKKELE EVNVNIEKAA AEVSCLKLAS SSLQLELEKE
501: KSTLASIKQR EGMASIAVAS IEAEIDRTRS EIASVQSKEK DAREKMVELP KQLQQAAEEA DEAKSLAEVA REELRKAKEE AEQAKAGAST MESRLFAAQK
601: EIEAAKASER LALAAIKALE ESESTLKAND TDSPRSVTLS LEEYYELSKR AHEAEELANA RVAAAVSRIE EAKETEMRSL EKLEEVNRDM DARKKALKEA
701: TEKAEKAKEG KLGVEQELRK WRAEHEQKRK AGDGVNTEKN LKESFEGGKM EQSPEAVVYA SSPSESYGTE ENSETNLSPQ TKSRKKKKKL SFPRFFMFLS
801: KKKSHNN
101: TSTTIVEEVM EPDEIGLPSV KITEAATGTA RNGGGSPRTV SSPRFSGSPV STGTPKNVDS HRGLIDTAAP FESVKEAVSK FGGITDWKSH RMQAVERRKL
201: IEEELKKIHE EIPEYKTHSE TAEAAKLQVL KELESTKRLI EQLKLNLDKA QTEEQQAKQD SELAKLRVEE MEQGIAEDVS VAAKAQLEVA KARHTTAITE
301: LSSVKEELET LHKEYDALVQ DKDVAVKKVE EAMLASKEVE KTVEELTIEL IATKESLESA HASHLEAEEQ RIGAAMARDQ DTHRWEKELK QAEEELQRLN
401: QQIHSSKDLK SKLDTASALL LDLKAELVAY MESKLKQEAC DSTTNTDPST ENMSHPDLHA AVASAKKELE EVNVNIEKAA AEVSCLKLAS SSLQLELEKE
501: KSTLASIKQR EGMASIAVAS IEAEIDRTRS EIASVQSKEK DAREKMVELP KQLQQAAEEA DEAKSLAEVA REELRKAKEE AEQAKAGAST MESRLFAAQK
601: EIEAAKASER LALAAIKALE ESESTLKAND TDSPRSVTLS LEEYYELSKR AHEAEELANA RVAAAVSRIE EAKETEMRSL EKLEEVNRDM DARKKALKEA
701: TEKAEKAKEG KLGVEQELRK WRAEHEQKRK AGDGVNTEKN LKESFEGGKM EQSPEAVVYA SSPSESYGTE ENSETNLSPQ TKSRKKKKKL SFPRFFMFLS
801: KKKSHNN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.