CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH07566
KRH15355
KRH45361
KRH51982
KRH61284

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26570.1	KRH07566	AT2G26570.1	20974974
AT2G26570.1	KRH15355	AT2G26570.1	20974974
AT2G26570.1	KRH45361	AT2G26570.1	20974974
AT2G26570.1	KRH51982	AT2G26570.1	20974974
AT2G26570.1	KRH61284	AT2G26570.1	20974974

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH07566	Soybean	nucleus	78.84	75.12
Solyc04g078950.1.1	Tomato	nucleus	22.18	42.62
Bra034308.1-P	Field mustard	nucleus	46.08	41.73
Solyc07g026880.1.1	Tomato	cytosol	9.9	37.66
Bra041137.1-P	Field mustard	nucleus	35.84	37.43
CDY48180	Canola	nucleus	46.08	36.59
Solyc05g042150.1.1	Tomato	cytosol	11.95	36.46
CDX77048	Canola	nucleus	45.56	35.27
AT2G26570.1	Thale cress	nucleus	47.78	34.7
AT4G33390.1	Thale cress	nucleus	45.73	34.4
VIT_18s0001g10560.t01	Wine grape	nucleus	49.15	34.12
CDY46119	Canola	nucleus	38.74	33.43
CDX72400	Canola	nucleus	38.4	33.09
Os06t0314000-01	Rice	cytosol, nucleus	27.82	32.21
Solyc12g088830.1.1	Tomato	nucleus	45.9	31.91
Solyc07g022910.2.1	Tomato	plastid	46.08	31.88
PGSC0003DMT400039921	Potato	nucleus	46.08	31.54
CDX68971	Canola	mitochondrion, nucleus, plastid	43.0	31.27
CDX71526	Canola	nucleus	38.05	30.8
CDY22380	Canola	nucleus	37.54	30.6
Bra033647.1-P	Field mustard	nucleus	37.54	30.51
TraesCS1D01G248300.1	Wheat	nucleus, plastid	37.2	30.4
PGSC0003DMT400011385	Potato	nucleus	46.59	30.23
AT5G42880.1	Thale cress	nucleus	38.74	30.23
KRH51982	Soybean	nucleus	49.15	30.22
KRH61284	Soybean	nucleus	48.46	29.19
GSMUA_Achr6P10120_001	Banana	nucleus	43.52	29.08
TraesCS1B01G259500.1	Wheat	nucleus	37.88	29.06
Os03t0395300-01	Rice	plasma membrane	38.4	28.99
Zm00001d029420_P002	Maize	nucleus	38.4	28.7
GSMUA_Achr9P27100_001	Banana	nucleus	39.59	28.22
CDY17108	Canola	nucleus	35.15	28.18
Bra040259.1-P	Field mustard	nucleus	35.15	28.14
KRH15355	Soybean	nucleus	48.29	28.02
EER92167	Sorghum	nucleus	37.37	27.93
GSMUA_Achr5P17590_001	Banana	nucleus	38.91	27.8
Zm00001d047240_P002	Maize	nucleus	37.03	27.64
TraesCS2A01G166400.1	Wheat	cytosol	37.37	27.62
CDY62582	Canola	nucleus	34.47	27.6
Bra014049.1-P	Field mustard	nucleus	35.49	27.59
TraesCS1A01G248800.1	Wheat	nucleus	36.69	27.56
GSMUA_Achr5P24580_001	Banana	cytosol	29.52	27.55
CDY17054	Canola	nucleus	33.28	27.46
HORVU2Hr1G030630.1	Barley	nucleus	37.03	27.36
CDY43212	Canola	nucleus	33.28	27.31
PGSC0003DMT400020677	Potato	nucleus	45.05	27.22
GSMUA_Achr10P...	Banana	cytosol	37.37	26.87
AT1G45545.2	Thale cress	nucleus	34.47	26.83
KXG36701	Sorghum	nucleus	37.71	26.79
Zm00001d022161_P001	Maize	nucleus	36.52	26.75
TraesCS2B01G192300.1	Wheat	nucleus	37.54	26.16
TraesCS2D01G173700.1	Wheat	nucleus	37.54	26.16
Os07t0619100-01	Rice	plasma membrane	34.47	24.72
HORVU1Hr1G062330.8	Barley	nucleus	38.05	24.67
Solyc08g015840.1.1	Tomato	cytosol	8.02	23.98
TraesCS4B01G300400.1	Wheat	nucleus	32.25	21.85
KRG98464	Soybean	mitochondrion	22.35	20.06
KRH46399	Soybean	cytosol	22.01	19.75
KRH36620	Soybean	cytosol, mitochondrion, nucleus	18.94	19.24
KRH11615	Soybean	cytosol, mitochondrion, nucleus	18.77	19.1
KRH75103	Soybean	nucleus	7.68	18.75
KRH51206	Soybean	cytosol	17.24	18.36
KRH01945	Soybean	cytosol, mitochondrion, nucleus	17.75	18.12
KRH73920	Soybean	nucleus	19.97	18.03

Protein Annotations

EntrezGene:100787470	MapMan:35.1	EMBL:ACUP02005197	ncoils:Coil	EnsemblPlantsGene:GLYMA_08G266500	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0009903
GO:GO:0009904	GO:GO:0009987	GO:GO:0016043	UniProt:I1KWZ1	ProteinID:KRH45360.1	EnsemblPlants:KRH45361
ProteinID:KRH45361	ProteinID:KRH45361.1	PFAM:PF05701	PANTHER:PTHR32054	PANTHER:PTHR32054:SF2	UniParc:UPI0002337F41
InterPro:Web	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:33297870..33301780

Molecular Weight (calculated)

66419.8 Da

IEP (calculated)

5.540

GRAVY (calculated)

-0.847

Length

586 amino acids

Sequence
(BLAST)

001: MESTFKDAVS KFGGRIDWKS RRTQSLVEER NKLAEDFRKE EIAEELENTK KLIEELKNSL EKVEKDELEA KKEVEHVILK IEEMEQDIAS EASIEAKAKL
101: EAKKSMLTEA LLEFEFVERE LDSVRKEYAS MASGRDIAIN NAEETIATSK QIEKAVEDLT TELIATKEEL NSTRTAHLEA EEQRLGVVDQ DSHNLKLELE
201: GVEKELQRVN EQVLSARVLK SKLESASSLL HDLKAELATY MESKVNEECY KEQKEKLKEL KLNIEKTTSD VNSLRAASVS LKSKLEKEKS ILTSLKKNEE
301: KALAVVANLQ DELEKSRLAT TFIQMKENEA RKMMTELPKK VQKAAQEADE AKSLAKAAQE EMIEAQEELE QAKAQSSTLE SSLLAKHKEI EAAKVVEMLA
401: RDAIITLEKS KSAEGNKNDK DSSSMVTLTL EEYHELSRRA YKAEEQANMR IEAANSQIQI ARESELRSLE KLKELNEELS VRRESLSIAT ENFKKANEGK
501: LAVEHELRTW RAEQEKQKKP GELNDEQTST PTKPAHDSSS PKGKVPSNNI EVGSASDKNK KKKKKKSLFP SKVVMFFAKK KTHPTK

Best Arabidopsis Sequence Match ( AT1G45545.2 )
(BLAST)

001: MMDDDHKVSN DISLLPDLNF DSSSPFTSIE FDSSICDLLN LETGGDTPNL IPDHNPFFDS FDGLQEEEED SHFVVEPESP KVYIAPRVMI NHQDSFSLDS
101: RNDEYIEDVK ILPGSPGGIQ DLGLSRLKVP GSPRAFVHPR SSGSPRFVSP TSPVLIDTAA PFESVKEAVS KFGGITDWKA HKIQTIERRK TVDQELEKIQ
201: EDMPDYKKQA VVAEEAKHQV VMELERTRNV VEELKLELEK AEKEEQQAKQ DSDLAKLRVE EMEQGIAGEV SVAAKSQLEV AKARHLSAVS ELGTIREEIE
301: MVSNEYESLL TEKDLAAKKA EDSVLKAKDV EKQMEGLTME VIATKQLLEL AHATHLEAQE KKLDAAMARD QDVYNQEKEL KMVEDEIKRF RQDIDAADDV
401: KTKLKTASAL QQDLRAEIAA YKDSNMGKRN NSDIQAAVDS ARKELEEVIS NIEKANSEVK TLKIIVGSLQ SELAREKHDL SETRQRNRED TREEKCTEIA
501: KKLQEASREA EEAKSLAIAA REELRKAKEE SDEAKTGLSA VERQLMESKK EMEASRASEK LALAAIKALQ ETEYANKIED ISSSPKSIII SVEEYYELSK
601: QAHEVEEAAN RKLAEIVSKI EVAKEEESRI LENLEEVSRE TAIRKVELKE AMTKVEKARD GKVGMDHELR KWRSDNGNRS PEGGNKENLS KSKSALHQPT
701: TFTFGEQASS SNVTPQASSS NVTPETETKK KKKRFSLLPK VFMFLSRKKS SNK

Arabidopsis Description

Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT1G45545]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.