Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY62582 | Canola | nucleus | 79.89 | 79.78 |
| CDY17054 | Canola | nucleus | 69.63 | 71.69 |
| CDY43212 | Canola | nucleus | 69.9 | 71.57 |
| AT1G45545.2 | Thale cress | nucleus | 70.45 | 68.39 |
| CDY22380 | Canola | nucleus | 49.11 | 49.93 |
| CDX71526 | Canola | nucleus | 48.97 | 49.45 |
| Solyc05g042150.1.1 | Tomato | cytosol | 12.04 | 45.83 |
| Solyc07g026880.1.1 | Tomato | cytosol | 9.17 | 43.51 |
| CDY48180 | Canola | nucleus | 41.31 | 40.92 |
| CDX72400 | Canola | nucleus | 37.89 | 40.74 |
| Solyc04g078950.1.1 | Tomato | nucleus | 16.96 | 40.66 |
| CDY46119 | Canola | nucleus | 37.76 | 40.65 |
| CDX77048 | Canola | nucleus | 41.72 | 40.29 |
| CDX68971 | Canola | mitochondrion, nucleus, plastid | 42.54 | 38.59 |
| KRH07566 | Soybean | nucleus | 31.33 | 37.24 |
| VIT_18s0001g10560.t01 | Wine grape | nucleus | 42.41 | 36.73 |
| Solyc07g022910.2.1 | Tomato | plastid | 42.54 | 36.72 |
| KRH45361 | Soybean | nucleus | 28.18 | 35.15 |
| PGSC0003DMT400039921 | Potato | nucleus | 40.9 | 34.93 |
| Solyc12g088830.1.1 | Tomato | nucleus | 40.22 | 34.88 |
| PGSC0003DMT400011385 | Potato | nucleus | 42.54 | 34.44 |
| KRH51982 | Soybean | nucleus | 42.41 | 32.53 |
| TraesCS1D01G248300.1 | Wheat | nucleus, plastid | 31.6 | 32.22 |
| Os03t0395300-01 | Rice | plasma membrane | 34.06 | 32.09 |
| GSMUA_Achr6P10120_001 | Banana | nucleus | 38.17 | 31.81 |
| PGSC0003DMT400020677 | Potato | nucleus | 41.72 | 31.44 |
| GSMUA_Achr10P... | Banana | cytosol | 34.88 | 31.29 |
| GSMUA_Achr9P27100_001 | Banana | nucleus | 34.61 | 30.78 |
| TraesCS1B01G259500.1 | Wheat | nucleus | 32.15 | 30.76 |
| TraesCS1A01G248800.1 | Wheat | nucleus | 32.69 | 30.64 |
| Solyc08g015840.1.1 | Tomato | cytosol | 8.21 | 30.61 |
| KRH61284 | Soybean | nucleus | 40.49 | 30.42 |
| Zm00001d022161_P001 | Maize | nucleus | 33.11 | 30.25 |
| GSMUA_Achr5P17590_001 | Banana | nucleus | 33.93 | 30.24 |
| Zm00001d029420_P002 | Maize | nucleus | 32.42 | 30.23 |
| TraesCS2A01G166400.1 | Wheat | cytosol | 32.42 | 29.89 |
| EER92167 | Sorghum | nucleus | 32.01 | 29.85 |
| Zm00001d047240_P002 | Maize | nucleus | 32.01 | 29.81 |
| HORVU2Hr1G030630.1 | Barley | nucleus | 31.87 | 29.38 |
| KXG36701 | Sorghum | nucleus | 33.11 | 29.33 |
| KRH15355 | Soybean | nucleus | 40.49 | 29.31 |
| Os07t0619100-01 | Rice | plasma membrane | 32.15 | 28.76 |
| TraesCS2B01G192300.1 | Wheat | nucleus | 32.97 | 28.66 |
| TraesCS2D01G173700.1 | Wheat | nucleus | 32.83 | 28.54 |
| GSMUA_Achr5P24580_001 | Banana | cytosol | 24.35 | 28.34 |
| HORVU1Hr1G062330.8 | Barley | nucleus | 33.11 | 26.77 |
| TraesCS4B01G300400.1 | Wheat | nucleus | 29.0 | 24.51 |
| Os06t0314000-01 | Rice | cytosol, nucleus | 15.46 | 22.33 |
| CDY21038 | Canola | cytosol | 15.32 | 20.48 |
| CDY31245 | Canola | cytosol | 15.18 | 20.26 |
| CDY58167 | Canola | cytosol | 14.23 | 20.0 |
| CDY42964 | Canola | cytosol | 13.95 | 19.62 |
| CDY50127 | Canola | cytosol | 13.95 | 19.5 |
| CDY28631 | Canola | nucleus | 17.37 | 19.48 |
| CDY17364 | Canola | nucleus | 17.37 | 19.45 |
| CDY11973 | Canola | nucleus | 16.83 | 19.13 |
| CDY35594 | Canola | nucleus | 13.68 | 19.12 |
| CDY36768 | Canola | nucleus | 16.83 | 19.07 |
| CDX90485 | Canola | cytosol | 13.41 | 18.49 |
| CDY09639 | Canola | cytosol | 13.13 | 18.08 |
| CDY11974 | Canola | cytosol, nucleus, plastid | 6.57 | 16.55 |
| CDY15972 | Canola | cytosol | 17.65 | 14.38 |
| CDY26542 | Canola | cytosol | 16.96 | 12.29 |
| CDY35593 | Canola | cytosol | 4.65 | 10.09 |
Protein Annotations
| EnsemblPlants:CDY17108 | EnsemblPlantsGene:GSBRNA2T00095155001 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF2 |
| PFAM:PF05701 | ProteinID:CDY17108 | ProteinID:CDY17108.1 | SEG:seg | UniParc:UPI0004EECE07 | UniProt:A0A078FXM9 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC06g00410DBnaC06g00410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FXM9]
Coordinates
chrLK032070:+:643721..646071
Molecular Weight (calculated)
82124.5 Da
IEP (calculated)
4.763
GRAVY (calculated)
-0.739
Length
731 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDDDKASND FSLLPDLNDD FSTPFTSIEF DSSILDLINL EDGGETPNLL PEHNPFLESV NTYQEDEDQH FAVEAESPKV YIAPRTIINH HDSFSLDPRM
101: DTIEDARISL PDSPRGSQDL TLSRLKVPGS PRALVLPRAS GSPRFESPTS PALIDTAAPF ESVKDAVSKF GGITDWKAHK IQTIEKRKTV DQELEKIQED
201: MPEYKKQAFV AEEAKQQVVM ELERTKSVVE ELKLELEKAE KEEQQAKQDS DLAKLRVEEM EQGIADESSI AVKTQLEVAK ARHVSAVSEL GVDSVLAAKD
301: VEKQMTGLTI EVIATKELLE SARAAHLEAE EKKLEAAMAR DQDVYNREKE LKMVEEEIER FRQEMHASDD VRIKIETASV LQQDLRAEIT SYKDDNMMIG
401: KRNNSDIQAA VDSARKELEQ VKSNIGKAIS EVKTLKIIVG SLQSELEREM KDLSETKQRE ALSVHRNSKE VREERCSEIA KKLQEANKEA EEATSLALAA
501: QEELRKAKGE SEEARAGVSA IESQLVEAKR EMEAAKASEK LALAAIKALQ ETEYATKVED ISTPRSIIIS VEEYYELSKQ AHEVEEAANR KLAEIVSQIE
601: VAKEEESRVL EKIEEVNRET AFQREKLKEA MDKVEKARDK KVNTDHELRK WSSENGKRSP MSSPEGGDKE NHDLGKSKSA LHSARSFAFG EEGSNNVGDS
701: SIVTPETKKK KKRFSLLPKV FMFLSRKKSN K
101: DTIEDARISL PDSPRGSQDL TLSRLKVPGS PRALVLPRAS GSPRFESPTS PALIDTAAPF ESVKDAVSKF GGITDWKAHK IQTIEKRKTV DQELEKIQED
201: MPEYKKQAFV AEEAKQQVVM ELERTKSVVE ELKLELEKAE KEEQQAKQDS DLAKLRVEEM EQGIADESSI AVKTQLEVAK ARHVSAVSEL GVDSVLAAKD
301: VEKQMTGLTI EVIATKELLE SARAAHLEAE EKKLEAAMAR DQDVYNREKE LKMVEEEIER FRQEMHASDD VRIKIETASV LQQDLRAEIT SYKDDNMMIG
401: KRNNSDIQAA VDSARKELEQ VKSNIGKAIS EVKTLKIIVG SLQSELEREM KDLSETKQRE ALSVHRNSKE VREERCSEIA KKLQEANKEA EEATSLALAA
501: QEELRKAKGE SEEARAGVSA IESQLVEAKR EMEAAKASEK LALAAIKALQ ETEYATKVED ISTPRSIIIS VEEYYELSKQ AHEVEEAANR KLAEIVSQIE
601: VAKEEESRVL EKIEEVNRET AFQREKLKEA MDKVEKARDK KVNTDHELRK WSSENGKRSP MSSPEGGDKE NHDLGKSKSA LHSARSFAFG EEGSNNVGDS
701: SIVTPETKKK KKRFSLLPKV FMFLSRKKSN K
001: MDDDHKVSND ISLLPDLNFD SSSPFTSIEF DSSICDLLNL ETGGDTPNLI PDHNPFFDSF DGLQEEEEDS HFVVEPESPK VYIAPRVMIN HQDSFSLDSR
101: NDEYIEDVKI LPGSPGGIQD LGLSRLKVPG SPRAFVHPRS SGSPRFVSPT SPVLIDTAAP FESVKEAVSK FGGITDWKAH KIQTIERRKT VDQELEKIQE
201: DMPDYKKQAV VAEEAKHQVV MELERTRNVV EELKLELEKA EKEEQQAKQD SDLAKLRVEE MEQGIAGEVS VAAKSQLEVA KARHLSAVSE LGTIREEIEM
301: VSNEYESLLT EKDLAAKKAE DSVLKAKDVE KQMEGLTMEV IATKQLLELA HATHLEAQEK KLDAAMARDQ DVYNQEKELK MVEDEIKRFR QDIDAADDVK
401: TKLKTASALQ QDLRAEIAAY KDSNMGKRNN SDIQAAVDSA RKELEEVISN IEKANSEVKT LKIIVGSLQS ELAREKHDLS ETRQRNREDT REEKCTEIAK
501: KLQEASREAE EAKSLAIAAR EELRKAKEES DEAKTGLSAV ERQLMESKKE MEASRASEKL ALAAIKALQE TEYANKIEDI SSSPKSIIIS VEEYYELSKQ
601: AHEVEEAANR KLAEIVSKIE VAKEEESRIL ENLEEVSRET AIRKVELKEA MTKVEKARDG KVGMDHELRK WRSDNGNRSP EGGNKENLSK SKSALHQPTT
701: FTFGEQASSS NVTPQASSSN VTPETETKKK KKRFSLLPKV FMFLSRKKSS NK
101: NDEYIEDVKI LPGSPGGIQD LGLSRLKVPG SPRAFVHPRS SGSPRFVSPT SPVLIDTAAP FESVKEAVSK FGGITDWKAH KIQTIERRKT VDQELEKIQE
201: DMPDYKKQAV VAEEAKHQVV MELERTRNVV EELKLELEKA EKEEQQAKQD SDLAKLRVEE MEQGIAGEVS VAAKSQLEVA KARHLSAVSE LGTIREEIEM
301: VSNEYESLLT EKDLAAKKAE DSVLKAKDVE KQMEGLTMEV IATKQLLELA HATHLEAQEK KLDAAMARDQ DVYNQEKELK MVEDEIKRFR QDIDAADDVK
401: TKLKTASALQ QDLRAEIAAY KDSNMGKRNN SDIQAAVDSA RKELEEVISN IEKANSEVKT LKIIVGSLQS ELAREKHDLS ETRQRNREDT REEKCTEIAK
501: KLQEASREAE EAKSLAIAAR EELRKAKEES DEAKTGLSAV ERQLMESKKE MEASRASEKL ALAAIKALQE TEYANKIEDI SSSPKSIIIS VEEYYELSKQ
601: AHEVEEAANR KLAEIVSKIE VAKEEESRIL ENLEEVSRET AIRKVELKEA MTKVEKARDG KVGMDHELRK WRSDNGNRSP EGGNKENLSK SKSALHQPTT
701: FTFGEQASSS NVTPQASSSN VTPETETKKK KKRFSLLPKV FMFLSRKKSS NK
Arabidopsis Description
Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT1G45545]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.