Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026233.1-P | Field mustard | cytosol | 95.77 | 95.59 |
| CDY35594 | Canola | nucleus | 87.69 | 87.19 |
| CDX90485 | Canola | cytosol | 81.35 | 79.81 |
| CDY09639 | Canola | cytosol | 80.77 | 79.1 |
| CDY50127 | Canola | cytosol | 74.81 | 74.38 |
| CDY58167 | Canola | cytosol | 74.23 | 74.23 |
| AT4G17210.1 | Thale cress | cytosol, plastid | 75.0 | 74.0 |
| CDY21038 | Canola | cytosol | 36.73 | 34.92 |
| CDY31245 | Canola | cytosol | 35.58 | 33.76 |
| KRH51206 | Soybean | cytosol | 32.5 | 30.73 |
| KRH36620 | Soybean | cytosol, mitochondrion, nucleus | 34.04 | 30.68 |
| KRH01945 | Soybean | cytosol, mitochondrion, nucleus | 33.46 | 30.31 |
| KRH11615 | Soybean | cytosol, mitochondrion, nucleus | 32.88 | 29.69 |
| OQU79020 | Sorghum | nucleus | 32.69 | 26.11 |
| TraesCS4D01G125200.1 | Wheat | nucleus | 31.54 | 25.87 |
| Os12t0271600-01 | Rice | plasma membrane | 32.12 | 25.81 |
| TraesCS4A01G188200.1 | Wheat | nucleus | 31.54 | 25.79 |
| TraesCS4B01G127500.1 | Wheat | nucleus | 31.35 | 25.71 |
| GSMUA_Achr7P16580_001 | Banana | cytosol | 30.38 | 25.65 |
| Zm00001d023629_P001 | Maize | nucleus | 31.92 | 25.46 |
| CDY11974 | Canola | cytosol, nucleus, plastid | 14.04 | 25.17 |
| Zm00001d041088_P004 | Maize | nucleus | 31.35 | 25.12 |
| GSMUA_Achr4P18510_001 | Banana | nucleus | 29.42 | 24.96 |
| PGSC0003DMT400034621 | Potato | mitochondrion, plastid | 21.54 | 24.83 |
| HORVU5Hr1G029890.1 | Barley | nucleus | 30.19 | 24.34 |
| TraesCS5A01G098800.2 | Wheat | cytosol | 29.81 | 24.26 |
| TraesCS5D01G110400.2 | Wheat | cytosol | 29.81 | 24.26 |
| TraesCS5B01G103500.1 | Wheat | nucleus | 29.62 | 24.1 |
| PGSC0003DMT400050839 | Potato | nucleus | 27.69 | 23.19 |
| Solyc04g015110.2.1 | Tomato | plastid | 27.69 | 23.11 |
| CDY17364 | Canola | nucleus | 27.88 | 22.21 |
| CDY28631 | Canola | nucleus | 27.31 | 21.78 |
| CDY36768 | Canola | nucleus | 26.73 | 21.55 |
| CDY11973 | Canola | nucleus | 26.15 | 21.15 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.58 | 21.01 |
| CDY15972 | Canola | cytosol | 35.0 | 20.29 |
| CDY26542 | Canola | cytosol | 34.81 | 17.94 |
| CDY22380 | Canola | nucleus | 22.88 | 16.55 |
| CDX71526 | Canola | nucleus | 22.5 | 16.16 |
| CDY48180 | Canola | nucleus | 21.92 | 15.45 |
| CDY46119 | Canola | nucleus | 20.0 | 15.32 |
| CDY43212 | Canola | nucleus | 20.96 | 15.27 |
| CDX72400 | Canola | nucleus | 19.81 | 15.15 |
| CDY17054 | Canola | nucleus | 20.38 | 14.93 |
| CDX68971 | Canola | mitochondrion, nucleus, plastid | 23.08 | 14.89 |
| CDX77048 | Canola | nucleus | 20.96 | 14.4 |
| CDY62582 | Canola | nucleus | 20.0 | 14.21 |
| CDY17108 | Canola | nucleus | 19.62 | 13.95 |
| CDY35593 | Canola | cytosol | 7.12 | 10.98 |
Protein Annotations
| EnsemblPlants:CDY42964 | EnsemblPlantsGene:GSBRNA2T00075742001 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF20 |
| PFAM:PF05701 | ProteinID:CDY42964 | ProteinID:CDY42964.1 | SEG:seg | UniParc:UPI0004EE7993 | UniProt:A0A078I065 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA01g17900DBnaA01g17900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I065]
Coordinates
chrLK032540:-:207744..209378
Molecular Weight (calculated)
60223.7 Da
IEP (calculated)
4.552
GRAVY (calculated)
-0.990
Length
520 amino acids
Sequence
(BLAST)
(BLAST)
001: MIRADAPVMP LETPPRSSEV GEIDTRPPFQ SVRDAVSLFR QVSFSKQQPP SLSSSSQDAT DVPDKETQLL LAEQEMNRVH LCLDSSVKAK ARALSDLDST
101: QQKAADLRDK LETTKQSRKR AIQTKHTINQ RLEKLQSQNQ ETESVRESYI LATAELFMAK EKLVEIEQEF SISVEERLSE LQRAEEAECS SMVNSQKINE
201: MLEEIAEMRD TAERLNSDAD KKKEEEVKIK EKSFDARETY AEMKREAEQR LEDLRSDCDP ELRKDIDELA EISAENQSLQ REIKLARELK EAKSAMQEIC
301: DEERSYKSLV ISLTVELDGV QRENRDLKEK EKEREEVEEE EWVEERLKVE ETMRVAERTR QEAEETRMHV DELRREAAAT HTVMGEAAKQ LEIVRRAVKK
401: AKTAEKRAVE DMTVLTEKKE SLTHDDPDKK IRISLKEHEE LRGKHEESER MVQYKAETVD AQLEEINESR VEGESMLEEK MKEMEEVKEA TDTALRSAEI
501: AEEAHCIVDA ELRKWKPEEL
101: QQKAADLRDK LETTKQSRKR AIQTKHTINQ RLEKLQSQNQ ETESVRESYI LATAELFMAK EKLVEIEQEF SISVEERLSE LQRAEEAECS SMVNSQKINE
201: MLEEIAEMRD TAERLNSDAD KKKEEEVKIK EKSFDARETY AEMKREAEQR LEDLRSDCDP ELRKDIDELA EISAENQSLQ REIKLARELK EAKSAMQEIC
301: DEERSYKSLV ISLTVELDGV QRENRDLKEK EKEREEVEEE EWVEERLKVE ETMRVAERTR QEAEETRMHV DELRREAAAT HTVMGEAAKQ LEIVRRAVKK
401: AKTAEKRAVE DMTVLTEKKE SLTHDDPDKK IRISLKEHEE LRGKHEESER MVQYKAETVD AQLEEINESR VEGESMLEEK MKEMEEVKEA TDTALRSAEI
501: AEEAHCIVDA ELRKWKPEEL
001: MVNIRVQKAP ESPRTMEVGE IDTRAPFQSV KAAVSLFGEV AVSKQRSTPR RSRLSSESVC DKETQLMLVH KEFMKIKQKL DNAESTRSRA LDDLSKAKKT
101: MEDLSNKLET VNKSKQSAID TKETVQQREE QLEHDKCHGS PPHHHELDVA REQYISTTVE LDAAKQQLNK IRQSFDSAMD FKATALNQAA EAQRALQVNS
201: AKVNELSKEI SDMKDAIHQL KLAAAQNLQE HANIVKEKDD LRECYRTAVE EAEKKLLVLR KEYEPELSRT LEAKLLETTS EIEVLREEMK KAHESEMNTV
301: KIITNELNEA TMRLQEAADD ECSLRSLVNS LRMELEDLRR EREELQQKEA ERLEIEETKK LEALKQESLK LEQMKTEAIE ARNEAANMNR KIESLKKETE
401: AAMIAAEEAE KRLELVIREV EEAKSAEEKV REEMKMISQK QESKKQDEES SGSKIKITIQ EFESLKRGAG ETEAAIEKKL ATIAAELEEI NKRRAEADNK
501: LEANLKAIEE MKQATELAQK SAESAEAAKR MVESELQRWR QQENVQLA
101: MEDLSNKLET VNKSKQSAID TKETVQQREE QLEHDKCHGS PPHHHELDVA REQYISTTVE LDAAKQQLNK IRQSFDSAMD FKATALNQAA EAQRALQVNS
201: AKVNELSKEI SDMKDAIHQL KLAAAQNLQE HANIVKEKDD LRECYRTAVE EAEKKLLVLR KEYEPELSRT LEAKLLETTS EIEVLREEMK KAHESEMNTV
301: KIITNELNEA TMRLQEAADD ECSLRSLVNS LRMELEDLRR EREELQQKEA ERLEIEETKK LEALKQESLK LEQMKTEAIE ARNEAANMNR KIESLKKETE
401: AAMIAAEEAE KRLELVIREV EEAKSAEEKV REEMKMISQK QESKKQDEES SGSKIKITIQ EFESLKRGAG ETEAAIEKKL ATIAAELEEI NKRRAEADNK
501: LEANLKAIEE MKQATELAQK SAESAEAAKR MVESELQRWR QQENVQLA
Arabidopsis Description
WEB family protein At1g12150 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWW5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.