Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21038 | Canola | cytosol | 89.78 | 89.95 |
| AT1G12150.2 | Thale cress | cytosol | 81.39 | 81.39 |
| CDY15972 | Canola | cytosol | 79.93 | 48.83 |
| CDY26542 | Canola | cytosol | 79.74 | 43.31 |
| KRH36620 | Soybean | cytosol, mitochondrion, nucleus | 43.98 | 41.77 |
| KRH51206 | Soybean | cytosol | 41.06 | 40.91 |
| KRH11615 | Soybean | cytosol, mitochondrion, nucleus | 41.79 | 39.76 |
| KRH01945 | Soybean | cytosol, mitochondrion, nucleus | 41.61 | 39.72 |
| CDY11974 | Canola | cytosol, nucleus, plastid | 19.71 | 37.24 |
| CDY58167 | Canola | cytosol | 35.22 | 37.12 |
| CDY50127 | Canola | cytosol | 34.12 | 35.76 |
| CDY42964 | Canola | cytosol | 33.76 | 35.58 |
| CDY09639 | Canola | cytosol | 34.31 | 35.4 |
| GSMUA_Achr7P16580_001 | Banana | cytosol | 39.78 | 35.39 |
| GSMUA_Achr4P18510_001 | Banana | nucleus | 39.05 | 34.91 |
| CDX90485 | Canola | cytosol | 33.39 | 34.53 |
| CDY35594 | Canola | nucleus | 32.85 | 34.42 |
| Os12t0271600-01 | Rice | plasma membrane | 39.23 | 33.23 |
| OQU79020 | Sorghum | nucleus | 39.23 | 33.03 |
| TraesCS4B01G127500.1 | Wheat | nucleus | 37.59 | 32.49 |
| TraesCS4D01G125200.1 | Wheat | nucleus | 37.41 | 32.33 |
| TraesCS4A01G188200.1 | Wheat | nucleus | 37.41 | 32.23 |
| Zm00001d023629_P001 | Maize | nucleus | 38.32 | 32.21 |
| TraesCS5A01G098800.2 | Wheat | cytosol | 37.04 | 31.77 |
| Zm00001d041088_P004 | Maize | nucleus | 37.59 | 31.74 |
| TraesCS5B01G103500.1 | Wheat | nucleus | 36.86 | 31.61 |
| TraesCS5D01G110400.2 | Wheat | cytosol | 36.68 | 31.46 |
| PGSC0003DMT400050839 | Potato | nucleus | 34.85 | 30.76 |
| HORVU5Hr1G029890.1 | Barley | nucleus | 36.13 | 30.7 |
| CDY11973 | Canola | nucleus | 35.95 | 30.64 |
| CDY36768 | Canola | nucleus | 35.95 | 30.54 |
| Solyc04g015110.2.1 | Tomato | plastid | 34.67 | 30.5 |
| CDY17364 | Canola | nucleus | 36.13 | 30.32 |
| CDY28631 | Canola | nucleus | 35.4 | 29.75 |
| PGSC0003DMT400034621 | Potato | mitochondrion, plastid | 24.09 | 29.27 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.66 | 28.28 |
| CDY22380 | Canola | nucleus | 22.08 | 16.83 |
| CDY46119 | Canola | nucleus | 20.62 | 16.64 |
| CDX72400 | Canola | nucleus | 20.62 | 16.62 |
| CDX71526 | Canola | nucleus | 21.53 | 16.3 |
| CDY48180 | Canola | nucleus | 21.72 | 16.12 |
| CDX68971 | Canola | mitochondrion, nucleus, plastid | 23.18 | 15.76 |
| CDY62582 | Canola | nucleus | 20.8 | 15.57 |
| CDY43212 | Canola | nucleus | 20.26 | 15.55 |
| CDY17054 | Canola | nucleus | 20.07 | 15.49 |
| CDX77048 | Canola | nucleus | 21.17 | 15.32 |
| CDY17108 | Canola | nucleus | 20.26 | 15.18 |
| CDY35593 | Canola | cytosol | 6.2 | 10.09 |
Protein Annotations
| EnsemblPlants:CDY31245 | EnsemblPlantsGene:GSBRNA2T00047391001 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF20 |
| PFAM:PF05701 | ProteinID:CDY31245 | ProteinID:CDY31245.1 | SEG:seg | UniParc:UPI0004EEE3B0 | UniProt:A0A078GXQ7 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC08g15400DBnaC08g15400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXQ7]
Coordinates
chrLK032269:-:219127..220874
Molecular Weight (calculated)
62333.5 Da
IEP (calculated)
5.072
GRAVY (calculated)
-0.947
Length
548 amino acids
Sequence
(BLAST)
(BLAST)
001: MVNVRVQQQG PESPRTSEVG EIDTRAPFQS VKAAVSLFGE VVSRQRSTPR RSRLSSESVT DKETQLMLAH KQFIKIKQKL DNAEITRSRA LSDLSKAKKT
101: MEELSNKLET VNKSKQSAID AKETVQQREE QLEHDKSQGS SPPHHHELDV AREQYLSTTV ELDAAKQKLN KIKQSFDSAM DFKATALNQA AEAKRAIQVN
201: SAKVNELSKE ITDMKDAIHQ LKVAATQNQQ EYGDIVKEKD DLRECYKTAV EEAEKKLLVL RKEYEPELAR TLEGKLIETT SEIESLREEM KKAHESEMNT
301: VKVITNELNE ATTRLQEASD EECSLRSLVN SIRMELEEMR RESEEMEKKE AERLEVEERK KVEALKEESL KLEGMKLEAL GARNEAEEMN RKIESLKKET
401: DSAMRAAEEA EKRLEIVIRE VEQAKAADEK VREEMKMISQ KQESKKQDES SSSKIKITVL EYETLKRGAG ETETETEKKL ADIAAELEEI NARKTEADTK
501: LGASLKAIEE MNHATELAQK SAESAEAAKS MVESELNRWR QQENVQHA
101: MEELSNKLET VNKSKQSAID AKETVQQREE QLEHDKSQGS SPPHHHELDV AREQYLSTTV ELDAAKQKLN KIKQSFDSAM DFKATALNQA AEAKRAIQVN
201: SAKVNELSKE ITDMKDAIHQ LKVAATQNQQ EYGDIVKEKD DLRECYKTAV EEAEKKLLVL RKEYEPELAR TLEGKLIETT SEIESLREEM KKAHESEMNT
301: VKVITNELNE ATTRLQEASD EECSLRSLVN SIRMELEEMR RESEEMEKKE AERLEVEERK KVEALKEESL KLEGMKLEAL GARNEAEEMN RKIESLKKET
401: DSAMRAAEEA EKRLEIVIRE VEQAKAADEK VREEMKMISQ KQESKKQDES SSSKIKITVL EYETLKRGAG ETETETEKKL ADIAAELEEI NARKTEADTK
501: LGASLKAIEE MNHATELAQK SAESAEAAKS MVESELNRWR QQENVQHA
001: MVNIRVQKAP ESPRTMEVGE IDTRAPFQSV KAAVSLFGEV AVSKQRSTPR RSRLSSESVC DKETQLMLVH KEFMKIKQKL DNAESTRSRA LDDLSKAKKT
101: MEDLSNKLET VNKSKQSAID TKETVQQREE QLEHDKCHGS PPHHHELDVA REQYISTTVE LDAAKQQLNK IRQSFDSAMD FKATALNQAA EAQRALQVNS
201: AKVNELSKEI SDMKDAIHQL KLAAAQNLQE HANIVKEKDD LRECYRTAVE EAEKKLLVLR KEYEPELSRT LEAKLLETTS EIEVLREEMK KAHESEMNTV
301: KIITNELNEA TMRLQEAADD ECSLRSLVNS LRMELEDLRR EREELQQKEA ERLEIEETKK LEALKQESLK LEQMKTEAIE ARNEAANMNR KIESLKKETE
401: AAMIAAEEAE KRLELVIREV EEAKSAEEKV REEMKMISQK QESKKQDEES SGSKIKITIQ EFESLKRGAG ETEAAIEKKL ATIAAELEEI NKRRAEADNK
501: LEANLKAIEE MKQATELAQK SAESAEAAKR MVESELQRWR QQENVQLA
101: MEDLSNKLET VNKSKQSAID TKETVQQREE QLEHDKCHGS PPHHHELDVA REQYISTTVE LDAAKQQLNK IRQSFDSAMD FKATALNQAA EAQRALQVNS
201: AKVNELSKEI SDMKDAIHQL KLAAAQNLQE HANIVKEKDD LRECYRTAVE EAEKKLLVLR KEYEPELSRT LEAKLLETTS EIEVLREEMK KAHESEMNTV
301: KIITNELNEA TMRLQEAADD ECSLRSLVNS LRMELEDLRR EREELQQKEA ERLEIEETKK LEALKQESLK LEQMKTEAIE ARNEAANMNR KIESLKKETE
401: AAMIAAEEAE KRLELVIREV EEAKSAEEKV REEMKMISQK QESKKQDEES SGSKIKITIQ EFESLKRGAG ETEAAIEKKL ATIAAELEEI NKRRAEADNK
501: LEANLKAIEE MKQATELAQK SAESAEAAKR MVESELQRWR QQENVQLA
Arabidopsis Description
WEB family protein At1g12150 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWW5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.