Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016786.1-P | Field mustard | cytosol | 98.72 | 98.72 |
| CDY31245 | Canola | cytosol | 89.95 | 89.78 |
| AT1G12150.2 | Thale cress | cytosol | 81.35 | 81.2 |
| CDY15972 | Canola | cytosol | 80.44 | 49.05 |
| CDY26542 | Canola | cytosol | 78.98 | 42.81 |
| KRH36620 | Soybean | cytosol, mitochondrion, nucleus | 42.96 | 40.73 |
| KRH51206 | Soybean | cytosol | 40.59 | 40.36 |
| KRH01945 | Soybean | cytosol, mitochondrion, nucleus | 41.86 | 39.9 |
| KRH11615 | Soybean | cytosol, mitochondrion, nucleus | 41.5 | 39.41 |
| CDY58167 | Canola | cytosol | 36.75 | 38.65 |
| CDY50127 | Canola | cytosol | 35.47 | 37.09 |
| CDY11974 | Canola | cytosol, nucleus, plastid | 19.56 | 36.9 |
| CDY42964 | Canola | cytosol | 34.92 | 36.73 |
| CDY09639 | Canola | cytosol | 35.28 | 36.35 |
| CDX90485 | Canola | cytosol | 34.73 | 35.85 |
| CDY35594 | Canola | nucleus | 34.19 | 35.76 |
| GSMUA_Achr7P16580_001 | Banana | cytosol | 39.67 | 35.23 |
| GSMUA_Achr4P18510_001 | Banana | nucleus | 37.84 | 33.77 |
| Os12t0271600-01 | Rice | plasma membrane | 38.39 | 32.46 |
| OQU79020 | Sorghum | nucleus | 38.57 | 32.41 |
| TraesCS4B01G127500.1 | Wheat | nucleus | 37.29 | 32.18 |
| TraesCS4A01G188200.1 | Wheat | nucleus | 37.29 | 32.08 |
| TraesCS4D01G125200.1 | Wheat | nucleus | 37.11 | 32.02 |
| Zm00001d023629_P001 | Maize | nucleus | 37.66 | 31.6 |
| TraesCS5A01G098800.2 | Wheat | cytosol | 36.75 | 31.46 |
| CDY36768 | Canola | nucleus | 36.93 | 31.32 |
| TraesCS5B01G103500.1 | Wheat | nucleus | 36.56 | 31.3 |
| TraesCS5D01G110400.2 | Wheat | cytosol | 36.38 | 31.14 |
| Zm00001d041088_P004 | Maize | nucleus | 36.56 | 30.82 |
| CDY11973 | Canola | nucleus | 36.2 | 30.79 |
| Solyc04g015110.2.1 | Tomato | plastid | 34.92 | 30.66 |
| CDY17364 | Canola | nucleus | 36.56 | 30.63 |
| PGSC0003DMT400050839 | Potato | nucleus | 34.73 | 30.6 |
| HORVU5Hr1G029890.1 | Barley | nucleus | 35.83 | 30.39 |
| CDY28631 | Canola | nucleus | 36.01 | 30.21 |
| PGSC0003DMT400034621 | Potato | mitochondrion, plastid | 24.13 | 29.27 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.36 | 27.96 |
| CDX71526 | Canola | nucleus | 22.49 | 16.99 |
| CDY22380 | Canola | nucleus | 22.3 | 16.97 |
| CDY46119 | Canola | nucleus | 20.48 | 16.49 |
| CDX72400 | Canola | nucleus | 20.48 | 16.47 |
| CDX68971 | Canola | mitochondrion, nucleus, plastid | 23.58 | 16.0 |
| CDY48180 | Canola | nucleus | 21.57 | 15.99 |
| CDX77048 | Canola | nucleus | 21.57 | 15.59 |
| CDY62582 | Canola | nucleus | 20.84 | 15.57 |
| CDY17108 | Canola | nucleus | 20.48 | 15.32 |
| CDY43212 | Canola | nucleus | 19.56 | 14.99 |
| CDY17054 | Canola | nucleus | 19.38 | 14.93 |
| CDY35593 | Canola | cytosol | 6.22 | 10.09 |
Protein Annotations
| EnsemblPlants:CDY21038 | EnsemblPlantsGene:GSBRNA2T00015201001 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF20 |
| PFAM:PF05701 | ProteinID:CDY21038 | ProteinID:CDY21038.1 | SEG:seg | UniParc:UPI0004EE5E63 | UniProt:A0A078G8N8 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA08g24870DBnaA08g24870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G8N8]
Coordinates
chrLK032115:-:419078..420824
Molecular Weight (calculated)
62425.7 Da
IEP (calculated)
5.429
GRAVY (calculated)
-0.947
Length
547 amino acids
Sequence
(BLAST)
(BLAST)
001: MVNIRVQQKG PESPRTSEVG EIDTRAPFQS VKAAVSLFGE VVSRQRSTPR RSRLSSESVT DKETQLMLAH KQFIKIKQKL DNSEITRSRA LSDLSKAKKT
101: MEELRTKLET VNKSKQSAID TKETVQQREE QLEHDKSQGS SPPHHHELDV ARERYLSTTV ELDAAKQKLN KIKQSFDSAL DFKATALNQA AEAKRAIQVN
201: SAKVSELSKE ITDMKDAIHQ LKLAATQNQQ EYGSIVKEKD DLRECYKTAV EEAEKKLLVL RKEYEPELSR TLEGKLIETT SEIESLREEM KKAHESEMNT
301: VKVITNELNE ATTRLQEASD EECSLRSLVN SIRMELDDMR REREEMEKRE AERLEVEERK KVEALKEESL KLEEMKLEAS RARNEAEEMN RKIESLKKET
401: DSAMIAAEEA EKRLEIVIRE VEQAKAADEK VREEMKIISQ KKESKKQDVS SSKIKITVQE YESLKRGAGE TETVAEKKLA DIAAELEEIN ARKAEADTKL
501: GASLKAIEEM NHATELAQKS AESAEAAKSM VESELNRWRQ QENVQHD
101: MEELRTKLET VNKSKQSAID TKETVQQREE QLEHDKSQGS SPPHHHELDV ARERYLSTTV ELDAAKQKLN KIKQSFDSAL DFKATALNQA AEAKRAIQVN
201: SAKVSELSKE ITDMKDAIHQ LKLAATQNQQ EYGSIVKEKD DLRECYKTAV EEAEKKLLVL RKEYEPELSR TLEGKLIETT SEIESLREEM KKAHESEMNT
301: VKVITNELNE ATTRLQEASD EECSLRSLVN SIRMELDDMR REREEMEKRE AERLEVEERK KVEALKEESL KLEEMKLEAS RARNEAEEMN RKIESLKKET
401: DSAMIAAEEA EKRLEIVIRE VEQAKAADEK VREEMKIISQ KKESKKQDVS SSKIKITVQE YESLKRGAGE TETVAEKKLA DIAAELEEIN ARKAEADTKL
501: GASLKAIEEM NHATELAQKS AESAEAAKSM VESELNRWRQ QENVQHD
001: MVNIRVQKAP ESPRTMEVGE IDTRAPFQSV KAAVSLFGEV AVSKQRSTPR RSRLSSESVC DKETQLMLVH KEFMKIKQKL DNAESTRSRA LDDLSKAKKT
101: MEDLSNKLET VNKSKQSAID TKETVQQREE QLEHDKCHGS PPHHHELDVA REQYISTTVE LDAAKQQLNK IRQSFDSAMD FKATALNQAA EAQRALQVNS
201: AKVNELSKEI SDMKDAIHQL KLAAAQNLQE HANIVKEKDD LRECYRTAVE EAEKKLLVLR KEYEPELSRT LEAKLLETTS EIEVLREEMK KAHESEMNTV
301: KIITNELNEA TMRLQEAADD ECSLRSLVNS LRMELEDLRR EREELQQKEA ERLEIEETKK LEALKQESLK LEQMKTEAIE ARNEAANMNR KIESLKKETE
401: AAMIAAEEAE KRLELVIREV EEAKSAEEKV REEMKMISQK QESKKQDEES SGSKIKITIQ EFESLKRGAG ETEAAIEKKL ATIAAELEEI NKRRAEADNK
501: LEANLKAIEE MKQATELAQK SAESAEAAKR MVESELQRWR QQENVQLA
101: MEDLSNKLET VNKSKQSAID TKETVQQREE QLEHDKCHGS PPHHHELDVA REQYISTTVE LDAAKQQLNK IRQSFDSAMD FKATALNQAA EAQRALQVNS
201: AKVNELSKEI SDMKDAIHQL KLAAAQNLQE HANIVKEKDD LRECYRTAVE EAEKKLLVLR KEYEPELSRT LEAKLLETTS EIEVLREEMK KAHESEMNTV
301: KIITNELNEA TMRLQEAADD ECSLRSLVNS LRMELEDLRR EREELQQKEA ERLEIEETKK LEALKQESLK LEQMKTEAIE ARNEAANMNR KIESLKKETE
401: AAMIAAEEAE KRLELVIREV EEAKSAEEKV REEMKMISQK QESKKQDEES SGSKIKITIQ EFESLKRGAG ETEAAIEKKL ATIAAELEEI NKRRAEADNK
501: LEANLKAIEE MKQATELAQK SAESAEAAKR MVESELQRWR QQENVQLA
Arabidopsis Description
WEB family protein At1g12150 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWW5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.