Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G237000.1 | Wheat | cytosol | 90.49 | 90.49 |
| TraesCS5A01G238500.1 | Wheat | cytosol | 89.73 | 89.62 |
| HORVU5Hr1G068440.1 | Barley | cytosol | 83.4 | 82.25 |
| Zm00001d005893_P001 | Maize | cytosol | 50.44 | 52.37 |
| Zm00001d020719_P002 | Maize | nucleus | 50.19 | 50.32 |
| KXG35766 | Sorghum | nucleus | 49.94 | 49.13 |
| Os09t0458000-00 | Rice | plasma membrane | 48.16 | 45.51 |
| TraesCS1D01G248300.1 | Wheat | nucleus, plastid | 29.66 | 32.64 |
| TraesCS2D01G173700.1 | Wheat | nucleus | 32.45 | 30.44 |
| TraesCS4D01G125200.1 | Wheat | nucleus | 17.24 | 21.45 |
| TraesCS5D01G110400.2 | Wheat | cytosol | 16.86 | 20.81 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G245400.1 | EnsemblPlantsGene:TraesCS5D01G245400 | InterPro:Web | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF15 |
| PFAM:PF05701 | SEG:seg | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5D:+:353799847..353804099
Molecular Weight (calculated)
88099.7 Da
IEP (calculated)
5.196
GRAVY (calculated)
-0.703
Length
789 amino acids
Sequence
(BLAST)
(BLAST)
001: MEELNVEGVQ QVEELNVKGV QQEEELNVKA VQQVAVVPNT VGSLENLTDS KPLVSVGFTE SSADGHNRHL SEDLSSLTIN DIRVNGEENC HNQSKGNGHN
101: RNFSEDIGSL TINECRANKV EENCHNQLEG KEQQQISRHN SAERNIFKAA EIAERFIQAL DNRVLVETAA PIESVKDAVS KFGGILDWKE RRKNVQLKLD
201: KVREEGPEYQ RRFIAEEVEK SKVLQELCST RRIIEGLKLS LEKAQTEALQ AQQDAELAEI RYKEIQQGIA RKESAAVKAE IVLAKERHAT ALADLQSVKE
301: ELEQLEKEHA ALITHRESAE IRAHESTAAS QEIEKIVEDL TLELISLKES LTSSHATHII AEERRINVAL AYEQEKLDSQ NELKQAEEEI QKLNGDISAN
401: KDLESKLEAA SALLANLQRD FTAYMEGILP EKESEVGEEV RSMVGVQMKL AKIRKELEDM RTNIETAKDE VKGLWNTAAA LRADLEKEKA DLTALKDKVH
501: HATVSVSSLQ EELRKTAREL SVVQQRTEAA KMPVELQQAT QETQRAKAKA RSACDEVTKA SEEADRAKAD VNIVQLKQEA VSREILAVKA SEEIAVASAN
601: ALQEYKEEGE IDPQADRRSD KSMMVPLEDY DALNKRAKEA EDRAKKRVME AVEKIKEAKE GEVRSLDKLH QLTKQIDERR EALREAHEKS ITAQENKLTM
701: ENELRKRRAK HGQHYTAGDA DLAIPDVCLL NGACSFDAAG SSASHTQGGD LGRADTIAAT AAAEPKARKS FFPRSIAAMF MNRKKTHSK
101: RNFSEDIGSL TINECRANKV EENCHNQLEG KEQQQISRHN SAERNIFKAA EIAERFIQAL DNRVLVETAA PIESVKDAVS KFGGILDWKE RRKNVQLKLD
201: KVREEGPEYQ RRFIAEEVEK SKVLQELCST RRIIEGLKLS LEKAQTEALQ AQQDAELAEI RYKEIQQGIA RKESAAVKAE IVLAKERHAT ALADLQSVKE
301: ELEQLEKEHA ALITHRESAE IRAHESTAAS QEIEKIVEDL TLELISLKES LTSSHATHII AEERRINVAL AYEQEKLDSQ NELKQAEEEI QKLNGDISAN
401: KDLESKLEAA SALLANLQRD FTAYMEGILP EKESEVGEEV RSMVGVQMKL AKIRKELEDM RTNIETAKDE VKGLWNTAAA LRADLEKEKA DLTALKDKVH
501: HATVSVSSLQ EELRKTAREL SVVQQRTEAA KMPVELQQAT QETQRAKAKA RSACDEVTKA SEEADRAKAD VNIVQLKQEA VSREILAVKA SEEIAVASAN
601: ALQEYKEEGE IDPQADRRSD KSMMVPLEDY DALNKRAKEA EDRAKKRVME AVEKIKEAKE GEVRSLDKLH QLTKQIDERR EALREAHEKS ITAQENKLTM
701: ENELRKRRAK HGQHYTAGDA DLAIPDVCLL NGACSFDAAG SSASHTQGGD LGRADTIAAT AAAEPKARKS FFPRSIAAMF MNRKKTHSK
001: MDDDHKVSND ISLLPDLNFD SSSPFTSIEF DSSICDLLNL ETGGDTPNLI PDHNPFFDSF DGLQEEEEDS HFVVEPESPK VYIAPRVMIN HQDSFSLDSR
101: NDEYIEDVKI LPGSPGGIQD LGLSRLKVPG SPRAFVHPRS SGSPRFVSPT SPVLIDTAAP FESVKEAVSK FGGITDWKAH KIQTIERRKT VDQELEKIQE
201: DMPDYKKQAV VAEEAKHQVV MELERTRNVV EELKLELEKA EKEEQQAKQD SDLAKLRVEE MEQGIAGEVS VAAKSQLEVA KARHLSAVSE LGTIREEIEM
301: VSNEYESLLT EKDLAAKKAE DSVLKAKDVE KQMEGLTMEV IATKQLLELA HATHLEAQEK KLDAAMARDQ DVYNQEKELK MVEDEIKRFR QDIDAADDVK
401: TKLKTASALQ QDLRAEIAAY KDSNMGKRNN SDIQAAVDSA RKELEEVISN IEKANSEVKT LKIIVGSLQS ELAREKHDLS ETRQRNREDT REEKCTEIAK
501: KLQEASREAE EAKSLAIAAR EELRKAKEES DEAKTGLSAV ERQLMESKKE MEASRASEKL ALAAIKALQE TEYANKIEDI SSSPKSIIIS VEEYYELSKQ
601: AHEVEEAANR KLAEIVSKIE VAKEEESRIL ENLEEVSRET AIRKVELKEA MTKVEKARDG KVGMDHELRK WRSDNGNRSP EGGNKENLSK SKSALHQPTT
701: FTFGEQASSS NVTPQASSSN VTPETETKKK KKRFSLLPKV FMFLSRKKSS NK
101: NDEYIEDVKI LPGSPGGIQD LGLSRLKVPG SPRAFVHPRS SGSPRFVSPT SPVLIDTAAP FESVKEAVSK FGGITDWKAH KIQTIERRKT VDQELEKIQE
201: DMPDYKKQAV VAEEAKHQVV MELERTRNVV EELKLELEKA EKEEQQAKQD SDLAKLRVEE MEQGIAGEVS VAAKSQLEVA KARHLSAVSE LGTIREEIEM
301: VSNEYESLLT EKDLAAKKAE DSVLKAKDVE KQMEGLTMEV IATKQLLELA HATHLEAQEK KLDAAMARDQ DVYNQEKELK MVEDEIKRFR QDIDAADDVK
401: TKLKTASALQ QDLRAEIAAY KDSNMGKRNN SDIQAAVDSA RKELEEVISN IEKANSEVKT LKIIVGSLQS ELAREKHDLS ETRQRNREDT REEKCTEIAK
501: KLQEASREAE EAKSLAIAAR EELRKAKEES DEAKTGLSAV ERQLMESKKE MEASRASEKL ALAAIKALQE TEYANKIEDI SSSPKSIIIS VEEYYELSKQ
601: AHEVEEAANR KLAEIVSKIE VAKEEESRIL ENLEEVSRET AIRKVELKEA MTKVEKARDG KVGMDHELRK WRSDNGNRSP EGGNKENLSK SKSALHQPTT
701: FTFGEQASSS NVTPQASSSN VTPETETKKK KKRFSLLPKV FMFLSRKKSS NK
Arabidopsis Description
Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT1G45545]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.