Factsheet for PGSC0003DMT400064476

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular

Predictor Summary:

plastid 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0031g01740.t01	Wine grape	mitochondrion	73.97	74.58
KRH59461	Soybean	mitochondrion	73.14	73.44
KRH43327	Soybean	mitochondrion	72.73	73.03
KRH16734	Soybean	endoplasmic reticulum	63.22	72.86
GSMUA_Achr9P26890_001	Banana	cytosol	45.45	68.32
CDY46237	Canola	mitochondrion	66.94	67.5
CDX76965	Canola	mitochondrion	66.53	67.08
CDY15861	Canola	mitochondrion	66.53	66.81
Os02t0131300-01	Rice	mitochondrion, plastid	66.12	66.67
GSMUA_Achr6P02850_001	Banana	mitochondrion	66.94	66.67
Bra031219.1-P	Field mustard	mitochondrion	66.53	66.53
CDY63375	Canola	mitochondrion	66.53	66.26
AT2G21870.1	Thale cress	mitochondrion	65.29	65.83
EES06231	Sorghum	mitochondrion	64.88	65.42
TraesCS6A01G092300.1	Wheat	golgi, mitochondrion	63.22	64.29
TraesCS6B01G120900.1	Wheat	mitochondrion	63.22	64.29
TraesCS6D01G081200.1	Wheat	golgi, mitochondrion	63.22	64.29
Zm00001d015134_P001	Maize	mitochondrion	64.46	64.2
Zm00001d007564_P001	Maize	plastid	40.08	62.99
Zm00001d053983_P002	Maize	mitochondrion	64.05	54.96
HORVU0Hr1G018510.1	Barley	plasma membrane	63.64	48.73
Zm00001d041144_P001	Maize	cytosol	27.27	47.48

Protein Annotations

EntrezGene:102606142	MapMan:35.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005507
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	GO:GO:0005737
GO:GO:0005739	GO:GO:0005753	GO:GO:0007275	GO:GO:0008150	GO:GO:0008270	GO:GO:0009507
GO:GO:0009536	GO:GO:0009555	GO:GO:0016020	GO:GO:0050897	UniProt:M1CCF2	InterPro:MGP1
PFAM:PF15704	EnsemblPlantsGene:PGSC0003DMG400025052	PGSC:PGSC0003DMG400025052	EnsemblPlants:PGSC0003DMT400064476	PANTHER:PTHR36013	UniParc:UPI000295AA9E
RefSeq:XP_006359022.1	:	:	:	:	:

Description

ATP synthase 24 kDa subunit, mitochondrial [Source:PGSC_GENE;Acc:PGSC0003DMG400025052]

Coordinates

chr4:-:61490312..61494715

Molecular Weight (calculated)

27669.9 Da

IEP (calculated)

9.238

GRAVY (calculated)

-0.508

Length

242 amino acids

Sequence
(BLAST)

001: MALASRLLSR STRQLCAGQV VLRPEHAVPV RSFAKEAAAP TTLKGDQVLK DIFYEVKNKL ETAIGVLRKE KITIEPEDPA AVSEYAKVMK SVRQKANLLS
101: ESEIIKFNIE VETHEIPDAR TYLLKLKEMR VKRGLIDSQG IEDLQMAALD KVEKELKKPL LRNDKKGIAL LTAEFDKINQ KLGIRKEELP KYEEQLELKI
201: AKAQLEELKK DALEAMETQK KREEFKDEEM PTVKSLDIRN FI

Best Arabidopsis Sequence Match ( AT2G21870.1 )
(BLAST)

001: MAYASRFLSR SKQLQGGLVI LQQQHAIPVR AFAKEAARPT FKGDEMLKGV FFDIKNKFQA AVDILRKEKI TLDPEDPAAV KQYANVMKTI RQKADMFSES
101: QRIKHDIDTE TQDIPDARAY LLKLQEIRTR RGLTDELGAE AMMFEALEKV EKDIKKPLLR SDKKGMDLLV AEFEKGNKKL GIRKEDLPKY EENLELSMAK
201: AQLDELKSDA VEAMESQKKK EEFQDEEMPD VKSLDIRNFI

Arabidopsis Description

MGP1Probable ATP synthase 24 kDa subunit, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ12]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.