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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 9
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
EpiLoc:mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
 endoplasmic reticulum: 27224218
mitochondrion: 27780359
mitochondrion: 28499913
msms PMID: 27780359 doi
G Mustafa, S Komatsu
Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH16734 Soybean endoplasmic reticulum 85.06 97.62
KRH43327 Soybean mitochondrion 97.51 97.51
VIT_07s0031g01740.t01 Wine grape mitochondrion 80.91 81.25
PGSC0003DMT400064476 Potato extracellular, mitochondrion 73.44 73.14
GSMUA_Achr9P26890_001 Banana cytosol 48.55 72.67
CDY46237 Canola mitochondrion 70.54 70.83
CDY15861 Canola mitochondrion 70.54 70.54
CDX76965 Canola mitochondrion 69.71 70.0
AT2G21870.1 Thale cress mitochondrion 69.29 69.58
Bra031219.1-P Field mustard mitochondrion 69.71 69.42
GSMUA_Achr6P02850_001 Banana mitochondrion 69.29 68.72
CDY63375 Canola mitochondrion 69.29 68.72
Os02t0131300-01 Rice mitochondrion, plastid 66.39 66.67
EES06231 Sorghum mitochondrion 66.39 66.67
Zm00001d015134_P001 Maize mitochondrion 65.56 65.02
Zm00001d007564_P001 Maize plastid 41.49 64.94
TraesCS6A01G092300.1 Wheat golgi, mitochondrion 63.9 64.71
TraesCS6B01G120900.1 Wheat mitochondrion 63.9 64.71
TraesCS6D01G081200.1 Wheat golgi, mitochondrion 63.9 64.71
Zm00001d053983_P002 Maize mitochondrion 63.49 54.26
HORVU0Hr1G018510.1 Barley plasma membrane 63.49 48.42
Zm00001d041144_P001 Maize cytosol 27.39 47.48
Protein Annotations
EMBL:ACUP02003325EnsemblPlants:KRH59461EnsemblPlantsGene:GLYMA_05G184800EntrezGene:100811840GO:GO:0007275GO:GO:0008150
GO:GO:0009555InterPro:MGP1ncoils:CoilPANTHER:PTHR36013PFAM:PF15704ProteinID:KRH59461
ProteinID:KRH59461.1UniParc:UPI0002339F81UniProt:I1K4S0MapMan:35.1::
Description
hypothetical protein
Coordinates
chr5:+:37160359..37163632
Molecular Weight (calculated)
27532.6 Da
IEP (calculated)
6.338
GRAVY (calculated)
-0.496
Length
241 amino acids
Sequence
(BLAST)
001: MALSSRLFSK SKLIYGSQIL LQKEHAIPVR HFAKESAPPA LKGDEMLKNI FVEVKNKFET AIGILKKEKI TIDPEDPAAV SHYAKVMKTI REKASLLSES
101: QDILSTIEIE TQDIPDARTY LLTLKEIRVK RGLTDDLGAE ALMIDALDKV EKDLKKPLLR NDKKGMDLLL AEFDKINKKL GIRKEDLPKY EEELELKVAK
201: AQLEELKKDA LEAMETQKKR EEFKDEPESV DVKTLDIRNF L
Best Arabidopsis Sequence Match ( AT2G21870.1 )
(BLAST)
001: MAYASRFLSR SKQLQGGLVI LQQQHAIPVR AFAKEAARPT FKGDEMLKGV FFDIKNKFQA AVDILRKEKI TLDPEDPAAV KQYANVMKTI RQKADMFSES
101: QRIKHDIDTE TQDIPDARAY LLKLQEIRTR RGLTDELGAE AMMFEALEKV EKDIKKPLLR SDKKGMDLLV AEFEKGNKKL GIRKEDLPKY EENLELSMAK
201: AQLDELKSDA VEAMESQKKK EEFQDEEMPD VKSLDIRNFI
Arabidopsis Description
MGP1Probable ATP synthase 24 kDa subunit, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ12]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.