CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76965	Canola	mitochondrion	97.93	98.33
CDY46237	Canola	mitochondrion	97.1	97.5
CDY63375	Canola	mitochondrion	96.27	95.47
AT2G21870.1	Thale cress	mitochondrion	91.29	91.67
VIT_07s0031g01740.t01	Wine grape	mitochondrion	72.2	72.5
KRH59461	Soybean	mitochondrion	70.54	70.54
GSMUA_Achr9P26890_001	Banana	cytosol	46.47	69.57
KRH16734	Soybean	endoplasmic reticulum	60.58	69.52
KRH43327	Soybean	mitochondrion	68.05	68.05
PGSC0003DMT400064476	Potato	extracellular, mitochondrion	66.81	66.53
Os02t0131300-01	Rice	mitochondrion, plastid	65.15	65.42
GSMUA_Achr6P02850_001	Banana	mitochondrion	65.56	65.02
Zm00001d007564_P001	Maize	plastid	40.66	63.64
EES06231	Sorghum	mitochondrion	63.07	63.33
TraesCS6B01G120900.1	Wheat	mitochondrion	61.83	62.6
TraesCS6D01G081200.1	Wheat	golgi, mitochondrion	61.83	62.6
TraesCS6A01G092300.1	Wheat	golgi, mitochondrion	61.41	62.18
Zm00001d015134_P001	Maize	mitochondrion	62.66	62.14
Zm00001d053983_P002	Maize	mitochondrion	61.41	52.48
HORVU0Hr1G018510.1	Barley	plasma membrane	60.17	45.89
Zm00001d041144_P001	Maize	cytosol	26.14	45.32

Protein Annotations

EnsemblPlants:CDY15861	EnsemblPlantsGene:GSBRNA2T00090217001	GO:A0A078FRT4	GO:GO:0007275	GO:GO:0008150	GO:GO:0009555
InterPro:MGP1	ncoils:Coil	PANTHER:PTHR36013	PFAM:PF15704	ProteinID:CDY15861	ProteinID:CDY15861.1
UniParc:UPI0004EDD4B4	UniProt:A0A078FRT4	MapMan:35.1	:	:	:

Description

BnaA04g12500DBnaA04g12500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FRT4]

Coordinates

chrLK032059:+:178110..180219

Molecular Weight (calculated)

27739.6 Da

IEP (calculated)

9.148

GRAVY (calculated)

-0.712

Length

241 amino acids

Sequence
(BLAST)

001: MAYASRFLSR SKQLQGSLGV LQQHHNAIPV RAFAKEAARP TFKGDEMLKG VFTEIKNKFQ AAVDILRKEK ITLDPEDPAA VKHYANVMKT IRQKADMFSE
101: SQRIKYDIEN ETKEIPDARA YLLKLKDIRT RRGLTDELGA EAMMFEALEK VEKDIKKPLL RSDKKGMDLL VAEFEKGNKK LGIRKEDLPK YEENLELSIA
201: KAQLDELKSD ALEAMESQKK KEEFKDEEMP DVKSLDIRNF M

Best Arabidopsis Sequence Match ( AT2G21870.1 )
(BLAST)

001: MAYASRFLSR SKQLQGGLVI LQQQHAIPVR AFAKEAARPT FKGDEMLKGV FFDIKNKFQA AVDILRKEKI TLDPEDPAAV KQYANVMKTI RQKADMFSES
101: QRIKHDIDTE TQDIPDARAY LLKLQEIRTR RGLTDELGAE AMMFEALEKV EKDIKKPLLR SDKKGMDLLV AEFEKGNKKL GIRKEDLPKY EENLELSMAK
201: AQLDELKSDA VEAMESQKKK EEFQDEEMPD VKSLDIRNFI

Arabidopsis Description

MGP1Probable ATP synthase 24 kDa subunit, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ12]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.