CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59461	Soybean	mitochondrion	97.62	85.06
KRH43327	Soybean	mitochondrion	94.76	82.57
VIT_07s0031g01740.t01	Wine grape	mitochondrion	80.0	70.0
PGSC0003DMT400064476	Potato	extracellular, mitochondrion	72.86	63.22
GSMUA_Achr9P26890_001	Banana	cytosol	46.67	60.87
CDY46237	Canola	mitochondrion	69.52	60.83
CDY15861	Canola	mitochondrion	69.52	60.58
AT2G21870.1	Thale cress	mitochondrion	68.57	60.0
CDX76965	Canola	mitochondrion	68.57	60.0
Bra031219.1-P	Field mustard	mitochondrion	68.57	59.5
CDY63375	Canola	mitochondrion	68.57	59.26
GSMUA_Achr6P02850_001	Banana	mitochondrion	68.1	58.85
EES06231	Sorghum	mitochondrion	65.24	57.08
Os02t0131300-01	Rice	mitochondrion, plastid	64.29	56.25
Zm00001d015134_P001	Maize	mitochondrion	64.29	55.56
TraesCS6B01G120900.1	Wheat	mitochondrion	62.86	55.46
Zm00001d007564_P001	Maize	plastid	40.48	55.19
TraesCS6A01G092300.1	Wheat	golgi, mitochondrion	62.38	55.04
TraesCS6D01G081200.1	Wheat	golgi, mitochondrion	62.38	55.04
Zm00001d053983_P002	Maize	mitochondrion	61.9	46.1
HORVU0Hr1G018510.1	Barley	plasma membrane	61.43	40.82
Zm00001d041144_P001	Maize	cytosol	23.81	35.97

Protein Annotations

EMBL:ACUP02008995	EnsemblPlants:KRH16734	EnsemblPlantsGene:GLYMA_14G174100	GO:GO:0007275	GO:GO:0008150	GO:GO:0009555
InterPro:MGP1	ncoils:Coil	PANTHER:PTHR36013	PFAM:PF15704	ProteinID:KRH16734	ProteinID:KRH16734.1
UniParc:UPI00023D4864	UniProt:A0A0R0GE46	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:42958266..42961461

Molecular Weight (calculated)

24072.5 Da

IEP (calculated)

6.828

GRAVY (calculated)

-0.494

Length

210 amino acids

Sequence
(BLAST)

001: MIYGSQILLQ KEHAIPVRHF AKESAPPALK GDEMLKNIFV EVKNKFETAI GILKKEKITI DPEDPAVVSH YAKVMKTIRE KASLLPESQD ILSTIEIETQ
101: DIPDARTYLL TLKEIRVKRG LTDDLGAEAL MIDALDKVEK DLKKPLLRND KKGMDLLLAE FDKINKKLGI RKEDLPKYEE ELELKVAKAQ LEELKKDALE
201: AMETQKKRYY

Best Arabidopsis Sequence Match ( AT2G21870.2 )
(BLAST)

001: MAYASRFLSR SKQLQGGLVI LQQQHAIPVR AFAKEAARPT FKGDEMLKGV FFDIKNKFQA AVDILRKEKI TLDPEDPAAV KQYANVMKTI RQKADMFSES
101: QRIKHDIDTE TQDIPDARAY LLKLQEIRTR RGLTDELGAE AMMFEALEKV EKDIKKPLLR SDKKGMDLLV AEFEKGNKKL GIRKEDLPKY EENLELSMAK
201: AQLDELKSDA VEAMESQKKK

Arabidopsis Description

MGP1Probable ATP synthase 24 kDa subunit, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ12]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.