CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015134_P001	Maize	mitochondrion	95.83	94.65
Zm00001d007564_P001	Maize	plastid	59.17	92.21
Os02t0131300-01	Rice	mitochondrion, plastid	88.33	88.33
TraesCS6D01G081200.1	Wheat	golgi, mitochondrion	86.25	86.97
TraesCS6B01G120900.1	Wheat	mitochondrion	86.25	86.97
TraesCS6A01G092300.1	Wheat	golgi, mitochondrion	85.83	86.55
Zm00001d053983_P002	Maize	mitochondrion	94.17	80.14
GSMUA_Achr9P26890_001	Banana	cytosol	49.17	73.29
VIT_07s0031g01740.t01	Wine grape	mitochondrion	68.33	68.33
GSMUA_Achr6P02850_001	Banana	mitochondrion	69.17	68.31
KRH43327	Soybean	mitochondrion	67.08	66.81
KRH59461	Soybean	mitochondrion	66.67	66.39
KRH16734	Soybean	endoplasmic reticulum	57.08	65.24
PGSC0003DMT400064476	Potato	extracellular, mitochondrion	65.42	64.88
HORVU0Hr1G018510.1	Barley	plasma membrane	85.42	64.87
AT2G21870.1	Thale cress	mitochondrion	63.33	63.33
CDY46237	Canola	mitochondrion	63.33	63.33
CDY15861	Canola	mitochondrion	63.33	63.07
CDX76965	Canola	mitochondrion	62.92	62.92
Bra031219.1-P	Field mustard	mitochondrion	62.5	61.98
CDY63375	Canola	mitochondrion	62.5	61.73
Zm00001d041144_P001	Maize	cytosol	32.5	56.12

Protein Annotations

MapMan:35.1	EntrezGene:8057513	UniProt:C5XTU6	ncoils:Coil	EnsemblPlants:EES06231	ProteinID:EES06231
ProteinID:EES06231.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	GO:GO:0005737	GO:GO:0005739	GO:GO:0005753
GO:GO:0007275	GO:GO:0008150	GO:GO:0008270	GO:GO:0009507	GO:GO:0009536	GO:GO:0009555
GO:GO:0016020	GO:GO:0050897	InterPro:MGP1	PFAM:PF15704	PANTHER:PTHR36013	EnsemblPlantsGene:SORBI_3004G030000
unigene:Sbi.18013	UniParc:UPI0001A85F8B	RefSeq:XP_002453255.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:-:2401157..2404857

Molecular Weight (calculated)

27312.3 Da

IEP (calculated)

8.396

GRAVY (calculated)

-0.468

Length

240 amino acids

Sequence
(BLAST)

001: MALAARLVSR SRQLYSVQAA FGNGGATQVR SFAAPADRPP VSGDDLLKGI FFEVKKKFET ALGVLKKEKI TIDPEDPAAV SRYAQVMKTV REKADLLSDS
101: QRIKYTIETF TKGIPDARTY LNTLQQIRIK SGLIDHLGIE PLMMEALEKI EKDIKKPLLR SDKKNMATLL AEFDKINKKL GIRKEDLPKI EEELELEIAK
201: SELSELKKEC VEAMETQLKR EEFQDEEMPD VRKLDIRNFL

Best Arabidopsis Sequence Match ( AT2G21870.1 )
(BLAST)

001: MAYASRFLSR SKQLQGGLVI LQQQHAIPVR AFAKEAARPT FKGDEMLKGV FFDIKNKFQA AVDILRKEKI TLDPEDPAAV KQYANVMKTI RQKADMFSES
101: QRIKHDIDTE TQDIPDARAY LLKLQEIRTR RGLTDELGAE AMMFEALEKV EKDIKKPLLR SDKKGMDLLV AEFEKGNKKL GIRKEDLPKY EENLELSMAK
201: AQLDELKSDA VEAMESQKKK EEFQDEEMPD VKSLDIRNFI

Arabidopsis Description

MGP1Probable ATP synthase 24 kDa subunit, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ12]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.