Factsheet for TraesCS6B01G120900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

mitochondrion: 18390847

plastid: 16595579
mitochondrion: 21043471
mitochondrion: 23895732
golgi: 25769308
nucleus: 26579155

gfp PMID: 18390847 doi

P Xu, Y Yang, Z Zhang, W Chen, C Zhang, L Zhang, S Zou, Z Ma

The Applied Plant Genomics Laboratory, Crop Genomics and Bioinformatics Center & National Key Lab of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Jiangsu 210095, China.

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms PMID: 21043471 doi

RP Jacoby, AH Millar, NL Taylor

ARC Centre of Excellence in Plant Energy Biology & Centre for Comparative Analysis of Biomolecular Networks, M316, The University of Western Australia, 35 Stirling Highway, Crawley,WA 6009, Australia.

msms PMID: 23895732 doi

RP Jacoby, AH Millar, NL Taylor

ARC Centre of Excellence in Plant Energy Biology & Centre for Comparative Analysis of Biomolecular Networks (CABiN), M316, The University of Western Australia , 35 Stirling Highway, Crawley, WA 6009, Australia.

msms PMID: 26579155 doi

T Bonnot, E Bancel, C Chambon, J Boudet, G Branlard, P Martre

Metabolism Exploration Platform Proteomic Component, Institut National de la Recherche Agronomique Saint-Genès Champanelle, France., UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Institut National de la Recherche Agronomique Clermont-Ferrand, France ; UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Blaise Pascal University Aubière, France.

msms PMID: 16595579 doi

Y Balmer, WH Vensel, FM DuPont, BB Buchanan, WJ Hurkman

Department of Plant and Microbial Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G081200.1	Wheat	golgi, mitochondrion	98.32	98.32
TraesCS6A01G092300.1	Wheat	golgi, mitochondrion	97.48	97.48
EES06231	Sorghum	mitochondrion	86.97	86.25
Os02t0131300-01	Rice	mitochondrion, plastid	86.97	86.25
Zm00001d015134_P001	Maize	mitochondrion	87.82	86.01
Zm00001d007564_P001	Maize	plastid	54.2	83.77
Zm00001d053983_P002	Maize	mitochondrion	86.13	72.69
GSMUA_Achr9P26890_001	Banana	cytosol	48.32	71.43
HORVU0Hr1G018510.1	Barley	plasma membrane	94.12	70.89
GSMUA_Achr6P02850_001	Banana	mitochondrion	68.49	67.08
VIT_07s0031g01740.t01	Wine grape	mitochondrion	66.81	66.25
KRH59461	Soybean	mitochondrion	64.71	63.9
KRH43327	Soybean	mitochondrion	64.29	63.49
PGSC0003DMT400064476	Potato	extracellular, mitochondrion	64.29	63.22
KRH16734	Soybean	endoplasmic reticulum	55.46	62.86
CDY46237	Canola	mitochondrion	62.6	62.08
CDY15861	Canola	mitochondrion	62.6	61.83
AT2G21870.1	Thale cress	mitochondrion	62.18	61.67
CDX76965	Canola	mitochondrion	62.18	61.67
Bra031219.1-P	Field mustard	mitochondrion	62.18	61.16
CDY63375	Canola	mitochondrion	62.18	60.91
Zm00001d041144_P001	Maize	cytosol	29.83	51.08

Protein Annotations

MapMan:35.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	GO:GO:0005737	GO:GO:0005739
GO:GO:0005753	GO:GO:0007275	GO:GO:0008150	GO:GO:0008270	GO:GO:0009507	GO:GO:0009536
GO:GO:0009555	GO:GO:0016020	GO:GO:0050897	InterPro:MGP1	PFAM:PF15704	PANTHER:PTHR36013
EnsemblPlantsGene:TraesCS6B01G120900	EnsemblPlants:TraesCS6B01G120900.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6B:-:115945847..115949574

Molecular Weight (calculated)

27151.2 Da

IEP (calculated)

8.735

GRAVY (calculated)

-0.472

Length

238 amino acids

Sequence
(BLAST)

001: MALAARLVSR SRQLYSVQAA LANGGLTQVR SFAKEAAPVS GDDLLKGIFF EVKKKFETAL GVLKKEKITI DPDDPTAVAN YAQVMRTVRE KADLLNDSQR
101: IKYTIETFTK GIPDARTYLD TLQQLRKKSG LIDDMGIEDM MMEALEKVEK DIKKPLLRSD KKNMNLLLAE FDKINKKLGI RKEDLPKIEE NLEMELAKAE
201: LTELKKEVVE AMEGQLKREE FKDEVMPDVR KLDIRNFL

Best Arabidopsis Sequence Match ( AT2G21870.1 )
(BLAST)

001: MAYASRFLSR SKQLQGGLVI LQQQHAIPVR AFAKEAARPT FKGDEMLKGV FFDIKNKFQA AVDILRKEKI TLDPEDPAAV KQYANVMKTI RQKADMFSES
101: QRIKHDIDTE TQDIPDARAY LLKLQEIRTR RGLTDELGAE AMMFEALEKV EKDIKKPLLR SDKKGMDLLV AEFEKGNKKL GIRKEDLPKY EENLELSMAK
201: AQLDELKSDA VEAMESQKKK EEFQDEEMPD VKSLDIRNFI

Arabidopsis Description

MGP1Probable ATP synthase 24 kDa subunit, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ12]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.