Factsheet for PGSC0003DMT400066098

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400011661
PGSC0003DMT400046928
PGSC0003DMT400055712
PGSC0003DMT400078176

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G50030.1	PGSC0003DMT400011661	AT1G10840.1	23524850
AT1G50030.1	PGSC0003DMT400055712	AT1G10840.1	23524850
AT1G50030.1	PGSC0003DMT400046928	AT3G56150.1	23524850
AT1G50030.1	PGSC0003DMT400078176	AT3G56150.1	23524850

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g106770.2.1	Tomato	nucleus	98.87	99.11
CDY71256	Canola	cytosol	15.88	88.49
KRH77911	Soybean	nucleus	84.49	84.52
KRH27589	Soybean	nucleus	84.33	84.36
AT1G50030.1	Thale cress	plastid	81.0	80.61
CDY29333	Canola	plastid	79.71	79.87
GSMUA_Achr4P01370_001	Banana	nucleus	79.95	79.79
CDY46271	Canola	plastid	73.67	79.5
Bra039647.1-P	Field mustard	plastid	78.9	79.45
Bra018828.1-P	Field mustard	plastid	78.21	79.3
CDY28135	Canola	plastid	79.55	79.26
Os05t0235300-01	Rice	plasma membrane	76.43	76.55
CDY50976	Canola	plastid	75.54	76.31
OQU77830	Sorghum	cytosol	75.82	75.91
TraesCS1A01G227600.1	Wheat	nucleus	75.13	74.95
TraesCS1B01G241900.3	Wheat	nucleus	75.13	74.95
TraesCS1D01G229300.1	Wheat	nucleus	75.09	74.91
HORVU1Hr1G059220.10	Barley	nucleus	75.01	74.83
PGSC0003DMT400010706	Potato	cytosol	7.94	72.59
Zm00001d037950_P004	Maize	cytosol	53.22	72.12
VIT_03s0088g00450.t01	Wine grape	nucleus	85.54	71.91
Zm00001d037951_P001	Maize	mitochondrion	18.63	70.12

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.1070.11
Gene3D:1.20.120.150	Gene3D:1.25.10.10	EntrezGene:102604383	MapMan:18.4.7.1	MapMan:27.7.1.1	Gene3D:3.30.1010.10
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:DUF3385_TOR	InterPro:FATC_dom	InterPro:FRB_dom	InterPro:FRB_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0044877	InterPro:IPR000403
InterPro:IPR003152	InterPro:IPR011989	InterPro:IPR011990	InterPro:IPR014009	InterPro:IPR036738	InterPro:IPR036940
InterPro:Kinase-like_dom_sf	UniProt:M1CF02	PFAM:PF00454	PFAM:PF02259	PFAM:PF02260	PFAM:PF08771
PFAM:PF11865	EnsemblPlantsGene:PGSC0003DMG401025733	PGSC:PGSC0003DMG401025733	EnsemblPlants:PGSC0003DMT400066098	InterPro:PI3/4_kinase_CS	InterPro:PI3/4_kinase_cat_dom
InterPro:PI3/4_kinase_cat_sf	InterPro:PIK-rel_kinase_FAT	InterPro:PIK_FAT	ScanProsite:PS00915	ScanProsite:PS00916	PFscan:PS50290
PFscan:PS51189	PFscan:PS51190	PANTHER:PTHR11139	PANTHER:PTHR11139:SF9	SMART:SM00146	SMART:SM01343
SMART:SM01345	SMART:SM01346	SUPFAM:SSF47212	SUPFAM:SSF48371	SUPFAM:SSF48452	SUPFAM:SSF56112
InterPro:TOR	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000295DC5B	RefSeq:XP_006346276.1	SEG:seg	:

Description

PTOR [Source:PGSC_GENE;Acc:PGSC0003DMG401025733]

Coordinates

chr1:+:83378709..83415159

Molecular Weight (calculated)

278023.0 Da

IEP (calculated)

7.102

GRAVY (calculated)

-0.111

Length

2469 amino acids

Sequence
(BLAST)

0001: MATTVQAIRY PVATTGAGNI DALNRVLADL CSRGNPKDGA ALTLRRLVEE EARDLSGEAF ARFMDHLYER ITTFLDSNEV SENLGALRAI DELIDVTISE
0101: NASKVAKFSN YMRVAFETKR DPEILVLASK VLGHLARSGG AMTADEVERQ VKVALEWLRG ERIEYRRFAA VLILKEMAEN ASTVFNVHVP EFVDAIWVAL
0201: RDPTLAVREK AVEALRACLR VIEKRETRWR VQWYYRMFEA TQDGLGRNAP VHSIHGSLLA VGELLRNTGE FMMSRYREVA EIVLRYLEHR DRLVRLSITS
0301: LLPRIAHFLR DRFVTNYLTI CMNHILHVLK IPAERASGFI ALGEMAGALD GELINYLPTI TSHLRDAIAP RRGRPSLEAL ACVGNIAKAM GPTMEPHVRG
0401: LLDPMFSAGL SVTLVDSLEL LTESIPPLLP TIQNRLLECI SAILSRSHHA MSRQSAALSR GHLATVTPQV PELSGSALVQ LALQTLARFN FKGHDLLEFA
0501: RESVVVYLED EDGATRKDAA LCCCKLIANS FLAMSSTQFS PSRINRASGK RRRLVEEIVQ KLLIAAVADA DVTVRHSIFS SLYADGGFDE FLAQADSLTA
0601: IFATLNDEDF EVREYAISLA GRLSEKNPAY VLPALRRHLI QLLTYLEQSA DNKCKEESAK LLGCLIRNCE RLVLPYVTPI HKALVAKLCE GTGVNANSGI
0701: ISGVLVTVGD LARVGGFAMR QYISELMPLI VEALLDGAAV TKREVAVSTL GQVVQSTGYV ITPYNEYPQL LGLLLKLLNG ELAWSTRREV LKVLGIMGAL
0801: DPHVHKRNQQ SLPGSHGEVT RVTGDPGQHI RSMDELSTDL WPSFATSEDY YSTVAINSLM RILRDPSLSS YHQKVVGSLM FIFKSMGLGC VPYLPKVLPD
0901: LFHIVRICED GLKEFITWKL GTLVSIARQH IRKYLPELLS LISELWSSFS LPVANRPVHI APILHLVEQL CLALNDEFRK YLPDILPCCI QVLTDAERFN
1001: DYTYVIPILH TLEVFGGTLD EHMHLLFPAL IRLFKVDASV EVRRGAIKTL TRLIPCVQVT GHISSLVHHL KLVLDGNKEE LRKDAIDALC CLAHALGEDF
1101: TIFIPSIHKL MVKHRLQHKE FEEIQGRLEK REPLIFGSTT AQRLNRRLPV EVISDPLSDG ESDLYEVGTD MQKQLRNHQV NDGRLRTAGE ASQRSTKEDW
1201: AEWMRHFSIE LLKESPSPAL RTCARLAQLQ PFVGRELFAA GFVSCWSQLN EASQRQLVRS LEMAFSSPNI PPEILATLLN LAEFMEHDER PLPIDIRLLG
1301: ALAEKCRAFA KALHYKEMEF EGALSNRRDA NPVAVVEALI HINNQLHQYE AAVGILTYAQ QHLGVQLKES WYEKLQRWDD ALKAYTAKAS QASSSHLCLD
1401: ATLGRMRCLA ALARWEELNN LCKEYWTPAE PAARLEMAPM AANAAWNMGE WDQMAEYVSR LDDGDETKFR VLGNTASSGD GSSNGTFFRA VLLVRRGKYD
1501: EAREYVERAR KCLATELAAL VLESYERAYS NMVRVQQLSE LEEVIEYCTL PPMGNPVAEG RRALVRNMWN ERIKGAKRNV EVWQVLLAVR ALVLPPTEDI
1601: ETWIKFASLC RKNGRISQAR STLIKLLQFD PETTPATGRY HGPPQVMLAY LKYQWSLGED HKRKEAFARL QDLAMDLSRT ATLQPVMQNA LVASSGAPLV
1701: ARIYLRLGTW KWALSPGLDD DSIQEILSAF RNATHCATKW GKAWHTWALF NTAVMSHYTL RGFANIAAQF VVAAVTGYFH SIACGAHAKG VDDSLQDILR
1801: LLTLWFNHGA TSEVQMALQK GFTHVNINTW LVVLPQIIAR IHSNNHAVRE LIQSLLVRIG QSHPQALMYP LLVACKSISN LRRAAAQEVV DKVRQHSGVL
1901: VDQAQLVSKE LIRVAILWHE MWHEALEEAS RLYFGEHNIE GMLKVLEPLH EMLEEGAMRN NTTIKEKAFI QAYRIELLEA YECCMKYRRT GKDAELTQAW
2001: DLYYHVFRRI DKQLQTLTTL DLQSVSPELL ECRDLELAVP GTYRADSPVV TIASFAPQLV VITSKQRPRK LTIHGSDGKD YAFLLKGHED LRQDERVMQL
2101: FGLVNTLLEN SRKTAEKDLS IQRYDVIPLS PNSGLIEWVP NCDTLHQLIR EYRDARKITL NQEHKLMLSF APDYDNLPLI AKVEVFEYAL QNTEGNDLSR
2201: VLWLKSRTSE VWLDRRTNYT RSLAVMSMVG YLLGLGDRHP SNLMLHRYSG KILHIDFGDC FEASMNREKF PEKVPFRLTR MLVKAMEVSG IEGNFRSTCE
2301: NVMQVLRLHK DSVMAMMEAF VHDPLINWRL FNFNEVPQMS TLASAHVPPV VNSEESSSDR ELLQPQRGAR ERELLQAVNQ LGDANEVLNE RAVAVMARMS
2401: NKLTGRDFAA TSASSSSLQH PLDHSTLISG ETREADHGLS VKLQVQKLIQ QAMSHENLCQ NYVGWCPFW

Best Arabidopsis Sequence Match ( AT1G50030.1 )
(BLAST)

0001: MSTSSQSFVA GRPASMASPS QSHRFCGPSA TASGGGSFDT LNRVIADLCS RGNPKEGAPL AFRKHVEEAV RDLSGEASSR FMEQLYDRIA NLIESTDVAE
0101: NMGALRAIDE LTEIGFGENA TKVSRFAGYM RTVFELKRDP EILVLASRVL GHLARAGGAM TSDEVEFQMK TAFDWLRVDR VEYRRFAAVL ILKEMAENAS
0201: TVFNVHVPEF VDAIWVALRD PQLQVRERAV EALRACLRVI EKRETRWRVQ WYYRMFEATQ DGLGRNAPVH SIHGSLLAVG ELLRNTGEFM MSRYREVAEI
0301: VLRYLEHRDR LVRLSITSLL PRIAHFLRDR FVTNYLTICM NHILTVLRIP AERASGFIAL GEMAGALDGE LIHYLPTIMS HLRDAIAPRK GRPLLEAVAC
0401: VGNIAKAMGS TVETHVRDLL DVMFSSSLSS TLVDALDQIT ISIPSLLPTV QDRLLDCISL VLSKSHYSQA KPPVTIVRGS TVGMAPQSSD PSCSAQVQLA
0501: LQTLARFNFK GHDLLEFARE SVVVYLDDED AATRKDAALC CCRLIANSLS GITQFGSSRS TRAGGRRRRL VEEIVEKLLR TAVADADVTV RKSIFVALFG
0601: NQCFDDYLAQ ADSLTAIFAS LNDEDLDVRE YAISVAGRLS EKNPAYVLPA LRRHLIQLLT YLELSADNKC REESAKLLGC LVRNCERLIL PYVAPVQKAL
0701: VARLSEGTGV NANNNIVTGV LVTVGDLARV GGLAMRQYIP ELMPLIVEAL MDGAAVAKRE VAVSTLGQVV QSTGYVVTPY KEYPLLLGLL LKLLKGDLVW
0801: STRREVLKVL GIMGALDPHV HKRNQQSLSG SHGEVPRGTG DSGQPIPSID ELPVELRPSF ATSEDYYSTV AINSLMRILR DASLLSYHKR VVRSLMIIFK
0901: SMGLGCVPYL PKVLPELFHT VRTSDENLKD FITWGLGTLV SIVRQHIRKY LPELLSLVSE LWSSFTLPGP IRPSRGLPVL HLLEHLCLAL NDEFRTYLPV
1001: ILPCFIQVLG DAERFNDYTY VPDILHTLEV FGGTLDEHMH LLLPALIRLF KVDAPVAIRR DAIKTLTRVI PCVQVTGHIS ALVHHLKLVL DGKNDELRKD
1101: AVDALCCLAH ALGEDFTIFI ESIHKLLLKH RLRHKEFEEI HARWRRREPL IVATTATQQL SRRLPVEVIR DPVIENEIDP FEEGTDRNHQ VNDGRLRTAG
1201: EASQRSTKED WEEWMRHFSI ELLKESPSPA LRTCAKLAQL QPFVGRELFA AGFVSCWAQL NESSQKQLVR SLEMAFSSPN IPPEILATLL NLAEFMEHDE
1301: KPLPIDIRLL GALAEKCRVF AKALHYKEME FEGPRSKRMD ANPVAVVEAL IHINNQLHQH EAAVGILTYA QQHLDVQLKE SWYEKLQRWD DALKAYTLKA
1401: SQTTNPHLVL EATLGQMRCL AALARWEELN NLCKEYWSPA EPSARLEMAP MAAQAAWNMG EWDQMAEYVS RLDDGDETKL RGLASPVSSG DGSSNGTFFR
1501: AVLLVRRAKY DEAREYVERA RKCLATELAA LVLESYERAY SNMVRVQQLS ELEEVIEYYT LPVGNTIAEE RRALIRNMWT QRIQGSKRNV EVWQALLAVR
1601: ALVLPPTEDV ETWLKFASLC RKSGRISQAK STLLKLLPFD PEVSPENMQY HGPPQVMLGY LKYQWSLGEE RKRKEAFTKL QILTRELSSV PHSQSDILAS
1701: MVSSKGANVP LLARVNLKLG TWQWALSSGL NDGSIQEIRD AFDKSTCYAP KWAKAWHTWA LFNTAVMSHY ISRGQIASQY VVSAVTGYFY SIACAANAKG
1801: VDDSLQDILR LLTLWFNHGA TADVQTALKT GFSHVNINTW LVVLPQIIAR IHSNNRAVRE LIQSLLIRIG ENHPQALMYP LLVACKSISN LRRAAAQEVV
1901: DKVRQHSGAL VDQAQLVSHE LIRVAILWHE MWHEALEEAS RLYFGEHNIE GMLKVLEPLH DMLDEGVKKD STTIQERAFI EAYRHELKEA HECCCNYKIT
2001: GKDAELTQAW DLYYHVFKRI DKQLASLTTL DLESVSPELL LCRDLELAVP GTYRADAPVV TISSFSRQLV VITSKQRPRK LTIHGNDGED YAFLLKGHED
2101: LRQDERVMQL FGLVNTLLEN SRKTAEKDLS IQRYSVIPLS PNSGLIGWVP NCDTLHHLIR EHRDARKIIL NQENKHMLSF APDYDNLPLI AKVEVFEYAL
2201: ENTEGNDLSR VLWLKSRSSE VWLERRTNYT RSLAVMSMVG YILGLGDRHP SNLMLHRYSG KILHIDFGDC FEASMNREKF PEKVPFRLTR MLVKAMEVSG
2301: IEGNFRSTCE NVMQVLRTNK DSVMAMMEAF VHDPLINWRL FNFNEVPQLA LLGNNNPNAP ADVEPDEEDE DPADIDLPQP QRSTREKEIL QAVNMLGDAN
2401: EVLNERAVVV MARMSHKLTG RDFSSSAIPS NPIADHNNLL GGDSHEVEHG LSVKVQVQKL INQATSHENL CQNYVGWCPF W

Arabidopsis Description

TORTOR [Source:UniProtKB/TrEMBL;Acc:A0A178WN52]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.