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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
iPSORT:plastid
MultiLoc:nucleus
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
plastid: 26371478
nucleus: 28394025
msms PMID: 28394025 doi
AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID: 26371478 doi
M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi
Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400066098 Potato nucleus 99.11 98.87
Solyc01g106840.1.1 Tomato cytosol 3.13 85.56
GSMUA_Achr4P01370_001 Banana nucleus 79.7 79.35
Os05t0235300-01 Rice plasma membrane 76.21 76.15
OQU77830 Sorghum cytosol 75.68 75.59
TraesCS1A01G227600.1 Wheat nucleus 74.95 74.59
TraesCS1B01G241900.3 Wheat nucleus 74.95 74.59
TraesCS1D01G229300.1 Wheat nucleus 74.91 74.55
HORVU1Hr1G059220.10 Barley nucleus 74.83 74.46
Zm00001d037950_P004 Maize cytosol 53.02 71.68
Zm00001d037951_P001 Maize mitochondrion 18.55 69.66
Solyc03g112950.2.1 Tomato cytosol 10.72 17.59
Solyc01g111870.1.1 Tomato cytosol 15.67 14.15
Solyc01g109080.2.1 Tomato cytosol, endoplasmic reticulum, nucleus 15.92 10.54
Solyc03g112940.2.1 Tomato cytosol 4.91 8.12
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.1070.11
Gene3D:1.20.120.150Gene3D:1.25.10.10MapMan:18.4.7.1MapMan:27.7.1.1Gene3D:3.30.1010.10InterPro:ARM-like
InterPro:ARM-type_foldInterPro:DUF3385_TORInterPro:FATC_domInterPro:FRB_domInterPro:FRB_sfGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004674GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006259
GO:GO:0006281GO:GO:0006464GO:GO:0006468GO:GO:0006950GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0044877
InterPro:IPR000403InterPro:IPR003152InterPro:IPR011989InterPro:IPR011990InterPro:IPR014009InterPro:IPR036738
InterPro:IPR036940UniProt:K4B2P4InterPro:Kinase-like_dom_sfPFAM:PF00454PFAM:PF02259PFAM:PF02260
PFAM:PF08771PFAM:PF11865InterPro:PI3/4_kinase_CSInterPro:PI3/4_kinase_cat_domInterPro:PI3/4_kinase_cat_sfInterPro:PIK-rel_kinase_FAT
InterPro:PIK_FATScanProsite:PS00915ScanProsite:PS00916PFscan:PS50290PFscan:PS51189PFscan:PS51190
PANTHER:PTHR11139PANTHER:PTHR11139:SF9SMART:SM00146SMART:SM01343SMART:SM01345SMART:SM01346
SUPFAM:SSF47212SUPFAM:SSF48371SUPFAM:SSF48452SUPFAM:SSF56112EnsemblPlantsGene:Solyc01g106770.2EnsemblPlants:Solyc01g106770.2.1
InterPro:TORInterPro:TPR-like_helical_dom_sfUniParc:UPI00027678DCSEG:seg::
Description
No Description!
Coordinates
chr1:+:94513216..94548517
Molecular Weight (calculated)
277221.0 Da
IEP (calculated)
7.102
GRAVY (calculated)
-0.112
Length
2463 amino acids
Sequence
(BLAST)
0001: MAATVQAIRY PVATTGAGNI DALNRVLADL CTRGNPKDGA ALTLRRLVEE EARDLSGEAF ARFMDHLYER VTTSLDSNEV SENLGALRAI DELIDVTISE
0101: NASKVAKFSN YMRVAFETKR DPEILVLASK VLGHLARSGG AMTADEVERQ VKVALEWLRG ERIEYRRFAA VLILKEMAEN ASTVFNVHVP EFVDAIWVAL
0201: RDPTLAVREK AVEALRACLR VIEKRETRWR VQWYYRMFEA TQDGLGRNAP VHSIHGSLLA VGELLRNTGE FMMSRYREVA EIVLRYLEHR DRLVRLSITS
0301: LLPRIAHFLR DRFVTNYLTI CMNHILHVLK IPAERASGFI ALGEMAGALD GELINYLPTI TSHLRDAIAP RRGRPSLEAL ACVGNIAKAM GPTMEPHVRG
0401: LLDPMFSAGL SVTLVDSLDL LTESIPPLLP TIQNRLLECI SAILSRSHHA MSRQSAALSR GHLATVTPQV PELSGSALVQ LSLQTLARFN FKGHDLLEFA
0501: RESVVVYLED EDGATRKDAA LCCCKLIANS FLAMSSTQFS PSRINRASGK RRRLVEEIVQ KLLIAAVADA DVTVRHSIFS SLYADGGFDE FLAQADSLTA
0601: IFATLNDEDF EVREYAISLA GRLSEKNPAY VLPALRRHLI QLLTYLEQSA DNKCKEESAK LLGCLIRNCE RLVLPYVSPI HKALVAKLCE GTGVNANSGI
0701: ISGVLVTVGD LARVGGFAMR QYISELMPLI VEALLDGAAV TKREVAVSTL GQVVQSTGYV ITPYNEYPQL LGLLLKLLNG ELAWSTRREV LKVLGIMGAL
0801: DPHVHKRNQQ SLPGSHGEVT RVTGDPGQHI RSMDELPTDL WPSFATSEDY YSTVAINSLM RILRDPSLSS YHQKVVGSLM FIFKSMGLGC VPYLPKVLPD
0901: LFHIVRICED GLKEFITWKL GTLVSIARQH IRKYLPELLS LISELWSSFS LPAANRPVHI APILHLVEQL CLALNDEFRK YLPDILPCCI QVLTDAERFN
1001: DYTYVIPILH TLEVFGGTLD EHMHLLFPAL IRLFKVDASV EVRRGAIRTL TRLIPCVQVT GHISSLVHHL KLVLDGNKEE LRKDAIDALC CLAHALGEDF
1101: TIFIPSIHKL MVKHRLQHKE FEEIQGRVEK REPLIFGSTT AQRLNRRLPV EVISDPLSDG ESDLYEVGTD MQKQLRNHQV NDGRLRTAGE ASQRSTKEDW
1201: AEWMRHFSIE LLKESPSPAL RTCARLAQLQ LFAAGFVSCW SQLNEASQRQ LVRSLEMAFS SPNIPPEILA TLLNLAEFME HDERPLPIDI RLLGALAEKC
1301: RAFAKALHYK EMEFEGALSN RRDANPVAVV EALIHINNQL HQYEAAVGIL TYAQQHLGVQ LKESWYEKLQ RWDDALKAYT AKASQASSPH LCLDATLGRM
1401: RCLAALARWE ELNNLCKEYW TPAEPAARLE MAPMAANAAW NMGEWDQMAE YVSRLDDGDE TKLRVLGNTA SSGDGSSNGT FYRAVLLVRR GKYDEAREYV
1501: ERARKCLATE LAALVLESYE RAYSNMVRVQ QLSELEEVIE YCTLPPTGNP VAEGRRALVR NMWNERIKGA KRNVEVWQAL LAVRALVLPP TEDIETWIKF
1601: ASLCRKNGRI SQARSTLIKL LQFDPETTPA TVRYHGPPQV MLAYLKYQWS LGEDHKRKEA FARLQDLAMD LSRTATLQPV MQNALVASSG APLVARIYLR
1701: LGTWKWALSP GLDDDSIQEI LSAFRNATHC ATKWGKAWHT WALFNTAVMS HYTLRGFANI AAQFVVAAVT GYFHSIACGA HAKGVDDSLQ DILRLLTLWF
1801: NHGATSEVQM ALQKGFTHVN INTWLVVLPQ IIARIHSNNH AVRELIQSLL VRIGQSHPQA LMYPLLVACK SISNLRRAAA QEVVDKVRQH SGVLVDQAQL
1901: VSKELIRVAI LWHEMWHEAL EEASRLYFGE HNIEGMLKVL EPLHEMLEEG AMRNNTTMKE KAFIQAYRIE LLEAYECCMK YRRTGKDAEL IQAWDLYYHV
2001: FRRIDKQLQT LTTLDLQSVS PELLECRDLE LAVPGTYRAD TPVVTIASFA PQLVVITSKQ RPRKLTIHGS DGKDYAFLLK GHEDLRQDER VMQLFGLVNT
2101: LLENSRKTAE KDLSIQRYDV IPLSPNSGLI EWVPNCDTLH QLIREYRDAR KITLNQEHKL MLSFAPDYDN LPLIAKVEVF EYALQNTEGN DLSRVLWLKS
2201: RTSEVWLDRR TNYTRSLAVM SMVGYLLGLG DRHPSNLMLH RFSGKILHID FGDCFEASMN REKFPEKVPF RLTRMLVKAM EVSGIEGNFR STCENVMQVL
2301: RLHKDSVMAM MEAFVHDPLI NWRLFNFNEV PQMSTLASAH VPPVVNSEDS SSDRELLQPQ RGARERELLQ AVNQLGDANE VLNERAVAVM ARMSNKLTGR
2401: DFAATSASSS SLQHPLDHST LISGETREAD HGLSVKLQVQ KLIQQAMSHE NLCQNYVGWC PFW
Best Arabidopsis Sequence Match ( AT1G50030.1 )
(BLAST)
0001: MSTSSQSFVA GRPASMASPS QSHRFCGPSA TASGGGSFDT LNRVIADLCS RGNPKEGAPL AFRKHVEEAV RDLSGEASSR FMEQLYDRIA NLIESTDVAE
0101: NMGALRAIDE LTEIGFGENA TKVSRFAGYM RTVFELKRDP EILVLASRVL GHLARAGGAM TSDEVEFQMK TAFDWLRVDR VEYRRFAAVL ILKEMAENAS
0201: TVFNVHVPEF VDAIWVALRD PQLQVRERAV EALRACLRVI EKRETRWRVQ WYYRMFEATQ DGLGRNAPVH SIHGSLLAVG ELLRNTGEFM MSRYREVAEI
0301: VLRYLEHRDR LVRLSITSLL PRIAHFLRDR FVTNYLTICM NHILTVLRIP AERASGFIAL GEMAGALDGE LIHYLPTIMS HLRDAIAPRK GRPLLEAVAC
0401: VGNIAKAMGS TVETHVRDLL DVMFSSSLSS TLVDALDQIT ISIPSLLPTV QDRLLDCISL VLSKSHYSQA KPPVTIVRGS TVGMAPQSSD PSCSAQVQLA
0501: LQTLARFNFK GHDLLEFARE SVVVYLDDED AATRKDAALC CCRLIANSLS GITQFGSSRS TRAGGRRRRL VEEIVEKLLR TAVADADVTV RKSIFVALFG
0601: NQCFDDYLAQ ADSLTAIFAS LNDEDLDVRE YAISVAGRLS EKNPAYVLPA LRRHLIQLLT YLELSADNKC REESAKLLGC LVRNCERLIL PYVAPVQKAL
0701: VARLSEGTGV NANNNIVTGV LVTVGDLARV GGLAMRQYIP ELMPLIVEAL MDGAAVAKRE VAVSTLGQVV QSTGYVVTPY KEYPLLLGLL LKLLKGDLVW
0801: STRREVLKVL GIMGALDPHV HKRNQQSLSG SHGEVPRGTG DSGQPIPSID ELPVELRPSF ATSEDYYSTV AINSLMRILR DASLLSYHKR VVRSLMIIFK
0901: SMGLGCVPYL PKVLPELFHT VRTSDENLKD FITWGLGTLV SIVRQHIRKY LPELLSLVSE LWSSFTLPGP IRPSRGLPVL HLLEHLCLAL NDEFRTYLPV
1001: ILPCFIQVLG DAERFNDYTY VPDILHTLEV FGGTLDEHMH LLLPALIRLF KVDAPVAIRR DAIKTLTRVI PCVQVTGHIS ALVHHLKLVL DGKNDELRKD
1101: AVDALCCLAH ALGEDFTIFI ESIHKLLLKH RLRHKEFEEI HARWRRREPL IVATTATQQL SRRLPVEVIR DPVIENEIDP FEEGTDRNHQ VNDGRLRTAG
1201: EASQRSTKED WEEWMRHFSI ELLKESPSPA LRTCAKLAQL QPFVGRELFA AGFVSCWAQL NESSQKQLVR SLEMAFSSPN IPPEILATLL NLAEFMEHDE
1301: KPLPIDIRLL GALAEKCRVF AKALHYKEME FEGPRSKRMD ANPVAVVEAL IHINNQLHQH EAAVGILTYA QQHLDVQLKE SWYEKLQRWD DALKAYTLKA
1401: SQTTNPHLVL EATLGQMRCL AALARWEELN NLCKEYWSPA EPSARLEMAP MAAQAAWNMG EWDQMAEYVS RLDDGDETKL RGLASPVSSG DGSSNGTFFR
1501: AVLLVRRAKY DEAREYVERA RKCLATELAA LVLESYERAY SNMVRVQQLS ELEEVIEYYT LPVGNTIAEE RRALIRNMWT QRIQGSKRNV EVWQALLAVR
1601: ALVLPPTEDV ETWLKFASLC RKSGRISQAK STLLKLLPFD PEVSPENMQY HGPPQVMLGY LKYQWSLGEE RKRKEAFTKL QILTRELSSV PHSQSDILAS
1701: MVSSKGANVP LLARVNLKLG TWQWALSSGL NDGSIQEIRD AFDKSTCYAP KWAKAWHTWA LFNTAVMSHY ISRGQIASQY VVSAVTGYFY SIACAANAKG
1801: VDDSLQDILR LLTLWFNHGA TADVQTALKT GFSHVNINTW LVVLPQIIAR IHSNNRAVRE LIQSLLIRIG ENHPQALMYP LLVACKSISN LRRAAAQEVV
1901: DKVRQHSGAL VDQAQLVSHE LIRVAILWHE MWHEALEEAS RLYFGEHNIE GMLKVLEPLH DMLDEGVKKD STTIQERAFI EAYRHELKEA HECCCNYKIT
2001: GKDAELTQAW DLYYHVFKRI DKQLASLTTL DLESVSPELL LCRDLELAVP GTYRADAPVV TISSFSRQLV VITSKQRPRK LTIHGNDGED YAFLLKGHED
2101: LRQDERVMQL FGLVNTLLEN SRKTAEKDLS IQRYSVIPLS PNSGLIGWVP NCDTLHHLIR EHRDARKIIL NQENKHMLSF APDYDNLPLI AKVEVFEYAL
2201: ENTEGNDLSR VLWLKSRSSE VWLERRTNYT RSLAVMSMVG YILGLGDRHP SNLMLHRYSG KILHIDFGDC FEASMNREKF PEKVPFRLTR MLVKAMEVSG
2301: IEGNFRSTCE NVMQVLRTNK DSVMAMMEAF VHDPLINWRL FNFNEVPQLA LLGNNNPNAP ADVEPDEEDE DPADIDLPQP QRSTREKEIL QAVNMLGDAN
2401: EVLNERAVVV MARMSHKLTG RDFSSSAIPS NPIADHNNLL GGDSHEVEHG LSVKVQVQKL INQATSHENL CQNYVGWCPF W
Arabidopsis Description
TORTOR [Source:UniProtKB/TrEMBL;Acc:A0A178WN52]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.