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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr6P09120_001 Banana cytosol 16.17 50.84
VIT_17s0000g08350.t01 Wine grape extracellular 15.84 48.86
VIT_17s0000g08330.t01 Wine grape extracellular, mitochondrion, nucleus, plasma membrane 17.11 45.86
CDX77892 Canola cytosol 47.58 41.85
KRH63528 Soybean cytosol, nucleus, plasma membrane 53.56 26.31
AT3G48190.2 Thale cress cytosol, nucleus, plastid 49.4 24.43
Bra019530.1-P Field mustard cytosol 48.19 24.28
CDY21811 Canola cytosol 48.26 23.07
HORVU3Hr1G000420.22 Barley mitochondrion 38.72 19.46
Os01t0106700-00 Rice cytosol 31.95 19.46
TraesCS1B01G342800.2 Wheat cytosol 38.79 19.22
TraesCS1A01G329400.1 Wheat cytosol 38.66 19.11
OQU86543 Sorghum cytosol 38.86 19.08
TraesCS1D01G331500.2 Wheat cytosol 38.59 19.07
Zm00001d040166_P014 Maize nucleus, plastid 38.79 18.09
Solyc01g111870.1.1 Tomato cytosol 11.21 6.12
Solyc01g106770.2.1 Tomato nucleus 8.12 4.91
Solyc01g109080.2.1 Tomato cytosol, endoplasmic reticulum, nucleus 5.91 2.37
CDY68500 Canola cytosol 0.81 2.33
VIT_17s0000g08360.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, vacuole 0.47 0.64
Solyc03g112950.2.1 Tomato cytosol 0.47 0.47
Solyc01g106840.1.1 Tomato cytosol 0.0 0.0
CDX77893 Canola cytosol 0.0 0.0
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1MapMan:35.1
InterPro:ARM-type_foldInterPro:ATM_plantGO:GO:0003674GO:GO:0003824GO:GO:0004674GO:GO:0005488
GO:GO:0006464GO:GO:0006468GO:GO:0006950GO:GO:0006974GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538UniProt:K4BKE7PANTHER:PTHR37079
SUPFAM:SSF48371EnsemblPlantsGene:Solyc03g112940.2EnsemblPlants:Solyc03g112940.2.1UniParc:UPI0002767867SEG:seg:
Description
No Description!
Coordinates
chr3:+:63235439..63256226
Molecular Weight (calculated)
167620.0 Da
IEP (calculated)
6.576
GRAVY (calculated)
0.147
Length
1490 amino acids
Sequence
(BLAST)
0001: MLEGIKLLNA WLEGQRSVEF CRYIGEETAR LKPDEIPHSE TWPFLVTLLT KCVSLEISGS KKRLPKLNVA KTLRIVVQRA EDAKFSGKDM PLLSVAKLLF
0101: NHVWDVLKDT PSFQSEYGTI LRHLLAVRTY RFHLRKRVYC CLVLLYMEKV ETSLQEKSDG QINPREEVFR CIMTLHSLLE NPPGDFPDTL QDDIVKGFIG
0201: IFSYVRDEGK ISRKLIECIN IYLLKDGPNL GSKSLEIHDA LQHFVFRCWM TTRDRGLKDS LVLYARLQLN LMRDLADGSS LLEQLQDVLG KELDQMSNCN
0301: INLPWKDTTR DDKCGSLTSS QCGLMELAAL VFCRACVNTP IASPSEKRIR REHVVVQIRE RLSGGKWPWH AVFCYLIHNY HDRLKKDLLI YWFEGICSNF
0401: ERIINDANME HSYVGLLWTL RSLQGLSLML LFPVPALRTS SELSSTLSGV ETGWHTIWNC VICGLPTFST FKAVVDAALM LLRNLILNDT TNAYLVPQDL
0501: WDLRLLKRVP SISVLCFISC YFSRKCYQGD LRDTLYLRQN LLRAILAFPF WKECSMLNKH LVAVLPTAVY ALCTGGTPLL DKGLPPSHYV PETMNDVKVE
0601: DHTHESVHDL FECSVEVLAR IGQESVLEDV QPPCCQSLRL PRQIRDPLCH EVENHILEII KDEEHERMLL SDVIFLCAIL SNFMYCSYST RIGEEIVPCV
0701: ATLSQYVSKL LDRAACILEK SYDDLVCGLL GSRSIFDTIG TIRVSFESFL CSPLFNEMQA GNNIDILTAI IQSVERLLKV LAKLYEGSSS SGSNIHSKRG
0801: DLGSSASVSS HASHPVNSRT SMIIDMELDV NIASKDTDSV NIGGKATADV LVSSVNQRIE VISIITKLFS ALPSHTWDVM FELMEKESDP RVLELIIHSL
0901: CQHPHWSSSR KFLNFITSLN DFLDIQANLK VQSLNVLAAI CSLLESLLSC DGVAKHPKRT LSSREKLSEE GLISLGDLMN KIADSDLFDW VGRTKLIDCI
1001: CNFILVDPQT GQSMIEKLLL MLPDPDYRVR LCFARRVGVL FQTWDGHFEL FQDICSNFGI KVVTCSRDKL VIAKEVLAAG PQPHTILETT IVTLANLALH
1101: SEKIELEAVF MVCVIAAINP CLRRLVIASL DNLSRELKYT SRSKYMEELM ASILFSWVAT GVSLASLLEA RDLFVFNVEP INFIHSCCRW LLPSFLLHGD
1201: ISNMNWIAKV ACEPLAEMIK NHFVDIFSVC IALHCSKKAG WEKGSAVLES SILDIAKISE TERDKLIKTH MVSIVNTIFS LASTAEDPVL PLFSKETIAR
1301: AIKTVVDGFL EMDASSQNIG LIDKINIFRP DRVFTFIVEM HYKVSAAGHF RHKSYRLAGI EVLIDVLGHR VTVPSTARIS DLTFFSSYLL NLIGQCLDLD
1401: ALLDQCCRMI SSLLKVFKIK QLEGTAIVLG EQLQFLISKL VICCVPSESS SKVSAATSSQ VLSLLCQLTL DSDPSLHEYI KVGISGILIT
Best Arabidopsis Sequence Match ( AT3G48190.2 )
(BLAST)
0001: MVASRDVHEI VSKLSSDKAK TREDGVKLLN TWLEGERSIT FCRFLSQNTA KLKLDEIPNA ETWPFLVKLL LQCVSMEVSG SKRRMPKPTF AKTLRVVVQR
0101: TEETKFPGVQ FPLLSMAKTL FTHVHDILSN TPSFQSEYGT ILRHLLEIKE YRFQMRKRTY SSLVLLYMER AETGFCEKNS GQHSQKEEAF RYILTLQSLL
0201: ENSPGDFPDD LREEIVNGLI HIFSSVRDEG KLSRKLIECV NTFLLKDGPN LGSLSLEIHN AVEQFVFRCW LTTHDKNLKE ILVSYGRLQL NLTRDSSESS
0301: SLVEQLLDVV TRELDLGSSS SSASWGDTTK DEKLGALSSY QNSLVELAAH VFYRACVNTS RPSLSEKRAR RQHIAMRMVD ALTEGKWLWC AAFGCLVRNY
0401: CARINMDLLI YWFEAICTNF QRLLEDASMR RSYDGLLWTL RSLQGLSSGL SLPDITMDIS KSSASSSELD RGWQSIWSSL IHGLATFSSM SVIVDAVLVL
0501: LGSIISSNHI TVKILPQEVW DHQLFRHIPS EPALYFIACY FSRMGCQGNL QDDLHLRRNL LRAVCAPLSW KVRLTLDERM VQLLPAAAFS LCAGFKVSLP
0601: LPKEHLPTPS QWDVCEQIDD VDRERNFGLF ECSVEALTRI CSNSSKISGC QVPDVVQLPL VLRDPLLHDM DIYFLSIIPE VKEKGPLSDI FMGCALLCHF
0701: MHGSYITRKG KGSSSFFLKA CQYLLEGLDH AVESVSKSLN DLQRRGSLGF GSDFNEKGSI IVSLRSFTQS PVFSNRRDQN LLGASYDFVI HSLENLLRSF
0801: AKVYEEYTEH AWNTHSDTVP SKSLAPDSPE VGRIVDMDLD LAEDTKERDI IAAGGKAVPG LPVSMGNWKL GMVSLISCFS PVLQFPTWDV LYNLLEKESD
0901: PKVLENILYH LCKLSCLTSI PKVDDLVIFL DGMLSTQVKM KRNCLNIVTA LHVLLHTLSS SRRDSSGVEK NCGLSLKEAE SFQVFVQLGA MVNKVSEFGL
1001: LGWFGRVKLI NCICDLVLLN PQTGQTMIER LLLMLSDSDY RVRFVLARQI GILFQTWDGH EALFQDICSS FGIKLVTSSK EKLVTAKDVL AVGPQPRQKM
1101: ETVIITLMHL AYHSENIELQ AVFMMCAVSA KDPCQRELII AALDNLSAQL HYPSRFKYLE ELLGPILFHW IASGVSLAGL IETSQLFIPN AEPKYFIHFC
1201: SHWLLPALLL HEDHTNLDWV AKMAGQPVVV LVKENFVPIF SICMGLHCSK TSECDKGAMV LQNSILYVGE TSENERDKLI KQNMVSIVSF ILSCASSSPE
1301: PPVPTFSRDT ISLAVQTVVD GFLENTDYPK NAAITDRINI FRPDRVFMFI TEMHYRMSAA CHHRHTRHHL AALEELTILL GHRALVPSSL NYIFNLVGQF
1401: IGYPSLQDQC CSIASCLLDL FKSNPAKEIV SVLGDQLQFL VSKLVTCCID AEADTKISGA KSSQLVNLLH KLVVSSDSSL NEDIRDLEPL PDLKYFQVIR
1501: ESHIRICEAY SPRNHLLKCS RRSNYLPPRF LSRSLQALHN KLIASEVSQE DTNGETAETF WQSDDEIVNA VWTLVRVSAS DEADSMRLLV SDFLSRIGIR
1601: DPHTVVFHLP GNLVSMHGLQ GFGHNTGSKV RSLTENGISD ETLITLLNFL KKYLLDDSVK IIDVTSQTLR GILSTERGQQ ALSSFDSCER ALIEVHGRGV
1701: NLDIVEKILL DSQKQFKAEK FSLETPEVWS TDNKNFDRWI CQLVYCMIAL CEDVPIRLCQ NIALLKAEIS ELLFPSVVVS LAGRIGMDIN LHDLITSQVK
1801: EHIFTDSNKL TKSKQVMLNT LNELRMCYVL ERSIFSGQTK REKNSRSCST AAKIRDVESG SNGMAASITT NWEKVYWLSI DYLVVAGSAV VCGAYLTASM
1901: YVEYWCEEKF GNLSLGDPDF SYHDKLPDHV EILVSAITRI NEPDSLYGVI HSNKLSAQII TFEHEGNWTR ALEYYDLQAR SQKMVVPSSL SENLEVEQFQ
2001: PTTSARHSVF GEGEVQRQPF KGLIRSLQQT GCMHVLDLYC RGLTSREGCF QYDPEFIELQ YEAAWRAGKW DFSLLYPQTH CQPLQHAKNN NYHESLHCCL
2101: RALQEGDYDG FYGKLKDTKK ELVLSISRAS EESTEFIYST VVKLQILHHL GLVWDLRWTT SSHQSVHGYL VKQMACVDPV IPTMDQLSWL NKDWNSIITQ
2201: TQLHMTLLEP FIAFRRVLLQ ILGCEKCTMQ HLLQSASLLR KGTRFSHAAA SLHEFKFLCA RSNGQQPVPD WLGKLEEAKL LHAQGRHEVS ISLANYILHN
2301: YQLKEEASDI YRVIGKWLAE TRSSNSRTIL EKYLRPAVSL AEEQSSKICK RLVDRQSQTW FHLAHYADAL FKSYEERLSS SEWQAALRLR KHKTKELEVL
2401: IKRFKSSKKA EQSDYSLKIQ DLQKQLTMDK EEAEKLQVDR DNFLKLALEG YKRCLEIGDK YDVRVVFRQV SMWFSLASQK NVIDNMLSTI KEVQSYKFIP
2501: LVYQIASRLG SSKDESGSNS FQSALVSLIR KMAIDHPYHT ILQLLALANG DRIKDNQRSR NSFVVDMDKK LAAEHLLQDV SHYHGPMIRQ MKQLVDIYIK
2601: LAELETRRED TNRKVALPRE IRSVKQLELV PVVTATIPVD RSCQYNEGSF PFFRGLSDSV TVMNGINAPK VVECFGSDGQ KYKQLAKSGN DDLRQDAVME
2701: QFFGLVNTFL HNNRDTWKRR LAVRTYKVIP FTPSAGVLEW VDGTIPLGDY LIGSSRSEGA HGRYGIGNWK YPKCREHMSS AKDKRKAFVD VCTNFRPVMH
2801: YFFLEKFLQP ADWFVKRLAY TRSVAASSMV GYIVGLGDRH AMNILIDQAT AEVVHIDLGV AFEQGLMLKT PERVPFRLTR DIIDGMGITG VEGVFRRCCE
2901: ETLSVMRTNK EALLTIVEVF IHDPLYKWAL SPLKALQRQK ETEDYDGMNL EGLQEEFEGN KDATRALMRV KQKLDGYEGG EMRSIHGQAQ QLIQDAIDTD
3001: RLSHMFPGWG AWM
Arabidopsis Description
ATMSerine/Threonine-kinase ATM-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ79]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.