Skip to main content
crop-pal logo
Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, endoplasmic reticulum, vacuole, cytosol

Predictor Summary:
  • plastid 1
  • mitochondrion 2
  • endoplasmic reticulum 2
  • nucleus 1
  • extracellular 1
  • vacuole 2
  • plasma membrane 1
  • golgi 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX77893 Canola cytosol 59.01 63.5
Solyc03g112950.2.1 Tomato cytosol 77.3 56.03
CDY68500 Canola cytosol 17.19 36.24
Os01t0106700-00 Rice cytosol 66.64 29.64
KRH63528 Soybean cytosol, nucleus, plasma membrane 78.58 28.19
AT3G48190.2 Thale cress cytosol, nucleus, plastid 72.61 26.22
Bra019530.1-P Field mustard cytosol 68.38 25.16
OQU86543 Sorghum cytosol 69.49 24.91
TraesCS1B01G342800.2 Wheat cytosol 67.37 24.37
TraesCS1A01G329400.1 Wheat cytosol 67.46 24.35
TraesCS1D01G331500.2 Wheat cytosol 67.37 24.31
CDY21811 Canola cytosol 69.12 24.13
HORVU3Hr1G000420.22 Barley mitochondrion 63.14 23.17
Zm00001d040166_P014 Maize nucleus, plastid 65.44 22.28
VIT_03s0038g02970.t01 Wine grape cytosol 22.7 9.01
VIT_03s0088g00450.t01 Wine grape nucleus 19.58 7.25
VIT_03s0063g01750.t01 Wine grape cytosol 12.87 7.04
VIT_03s0063g01740.t01 Wine grape plastid 5.33 3.33
VIT_17s0000g08330.t01 Wine grape extracellular, mitochondrion, nucleus, plasma membrane 1.01 1.98
CDX77892 Canola cytosol 1.75 1.12
VIT_17s0000g08350.t01 Wine grape extracellular 0.37 0.83
Solyc03g112940.2.1 Tomato cytosol 0.64 0.47
GSMUA_Achr6P09120_001 Banana cytosol 0.09 0.21
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.1070.11
MapMan:14.1.1MapMan:18.4.7.1Gene3D:3.30.1010.10ProteinID:CCB42979ProteinID:CCB42979.1ncoils:Coil
UniProt:F6GSQ6InterPro:FATC_domEMBL:FN594950GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004674GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006259GO:GO:0006281GO:GO:0006464
GO:GO:0006468GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0019538InterPro:IPR000403InterPro:IPR003152InterPro:IPR014009
InterPro:IPR036940InterPro:Kinase-like_dom_sfPFAM:PF00454PFAM:PF02260InterPro:PI3/4_kinase_CSInterPro:PI3/4_kinase_cat_dom
InterPro:PI3/4_kinase_cat_sfInterPro:PIK_FATScanProsite:PS00915ScanProsite:PS00916PFscan:PS50290PFscan:PS51189
PFscan:PS51190PANTHER:PTHR11139PANTHER:PTHR11139:SF72SMART:SM00146SMART:SM01343SUPFAM:SSF56112
UniParc:UPI0002108930ArrayExpress:VIT_17s0000g08360EnsemblPlantsGene:VIT_17s0000g08360EnsemblPlants:VIT_17s0000g08360.t01unigene:Vvi.17845SEG:seg
Description
No Description!
Coordinates
chr17:+:9517812..9557124
Molecular Weight (calculated)
125059.0 Da
IEP (calculated)
7.559
GRAVY (calculated)
-0.426
Length
1088 amino acids
Sequence
(BLAST)
0001: MTITGRRTRL LSCENIRLLL SLICGSYFTS VMYVEHWCEE HFNSLTLGKP DFSHCEMLPH HIEILVSAIT QINEPDSLYG IIQLHKLTSQ IITFEHEGNW
0101: SKALEYYDLQ VRSEPVAGMD GSSRNLSPEH SQLTVHPSFS KSEDVIRQRE PYKGLIRSLQ KIGCTHVLDL YCQGLTSQNG QFQHDLEFTE LQYEAAWRAG
0201: NWDFSLLYMG ANSPSSSQHI RCDHFNENLH SCLRAFQEGD FNEFHSKLKD SKQELVLSVC HASGQSTEYI YSTIIKLQIF YHLGMAWGLR WAPPSEKIET
0301: SPGMQKVFSE PIIPTMDQGS RFSQAAAALH EFKFLCNRMG EQHSASYWLG RLEEAKLLRA QGQHEMAINL AKYISQNSQL NEEASNVYRL VGKWLAETRS
0401: SNSRTILEKY LKRAVLLAKD NKNTDKKTIE RQSQTHFHLA HYADALFRSH EERLASNEWQ AATRLRKHKT IELEALIKRL RSSSKGEKTD YSVKIQELQK
0501: QLAMDAEEAE KLQDDRDNFL SLTLEGYKRC LVLGDKYDVR VVFRLVSLWF SLSSRQNVIN MMLSTVQEVQ SYKFIPLVYQ IASRMGSSKD GLGPHSFQFA
0601: LVSLVKKMSI DHPYHTIFQL LALANGDRIK DKQRSRNSFV VDMDKKLAAE NLLKELSSCH GSIIQQMKQM VEIYIKLAEL ETKREDTNKR VMLPREIRSL
0701: RQLELVPVVT STFPVDRNCQ YHEGSFPHFK GLGDSVMIMN GINAPKVVEC LGSDGQKYRQ LAKSGNDDLR QDAVMEQFFS LVNTFLENHR DTWKRRLRVR
0801: TYKVVPFTPS AGVLEWVNGT LPLGEYLIGS TRNGGAHGRY GMEDWSFSKC REHMTNANKR KAFQEVCKNF RPVMHNFFLE RFLQPADWFE KRLAYTRSVA
0901: ASSMVGYIVG LGDRHSMNIL IDQATAEVVH IDLGVAFEQG LMLKTPERVP FRLTRDIIDG MGVTGVEGVF RRCCEETLSV MRTNKEALLT IVEVFIHDPL
1001: YKWALSPLKA LQRQKETDDD LETSLEDLEE EYEGNKDAAR ALLRVKQKLD GYEEGEMRSV HGQVRQLIQD AIDPDRFCRM FPGWGAWL
Best Arabidopsis Sequence Match ( AT3G48190.3 )
(BLAST)
0001: MVASRDVHEI VSKLSSDKAK TREDGVKLLN TWLEGERSIT FCRFLSQNTA KLKLDEIPNA ETWPFLVKLL LQCVSMEVSG SKRRMPKPTF AKTLRVVVQR
0101: TEETKFPGVQ FPLLSMAKTL FTHVHDILSN TPSFQSEYGT ILRHLLEIKE YRFQMRKRTY SSLVLLYMER AETGFCEKNS GQHSQKEEAF RYILTLQSLL
0201: ENSPGDFPDD LREEIVNGLI HIFSSVRDEG KLSRKLIECV NTFLLKDGPN LGSLSLEIHN AVEQFVFRCW LTTHDKNLKE ILVSYGRLQL NLTRDSSESS
0301: SLVEQLLDVV TRELDLGSSS SSASWGDTTK DEKLGALSSY QNSLVELAAH VFYRACVNTS RPSLSEKRAR RQHIAMRMVD ALTEGKWLWC AAFGCLVRNY
0401: CARINMDLLI YWFEAICTNF QRLLEDASMR RSYDGLLWTL RSLQGLSSGL SLPDITMDIS KSSASSSELD RGWQSIWSSL IHGLATFSSM SVIVDAVLVL
0501: LGSIISSNHI TVKILPQEVW DHQLFRHIPS EPALYFIACY FSRMGCQVRL TLDERMVQLL PAAAFSLCAG FKVSLPLPKE HLPTPSQWDV CEQIDDVDRE
0601: RNFGLFECSV EALTRICSNS SKISGCQVPD VVQLPLVLRD PLLHDMDIYF LSIIPEVKEK GPLSDIFMGC ALLCHFMHGS YITRKGKGSS SFFLKACQYL
0701: LEGLDHAVES VSKSLNDLQR RGSLGFGSDF NEKGSIIVSL RSFTQSPVFS NRRDQNLLGA SYDFVIHSLE NLLRSFAKVY EEYTEHAWNT HSDTVPSKSL
0801: APDSPEVGRI VDMDLDLAED TKERDIIAAG GKAVPGLPVS MGNWKLGMVS LISCFSPVLQ FPTWDVLYNL LEKESDPKVL ENILYHLCKL SCLTSIPKVD
0901: DLVIFLDGML STQVKMKRNC LNIVTALHVL LHTLSSSRRD SSGVEKNCGL SLKEAESFQV FVQLGAMVNK VSEFGLLGWF GRVKLINCIC DLVLLNPQTG
1001: QTMIERLLLM LSDSDYRVRF VLARQIGILF QTWDGHEALF QDICSSFGIK LVTSSKEKLV TAKDVLAVGP QPRQKMETVI ITLMHLAYHS ENIELQAVFM
1101: MCAVSAKDPC QRELIIAALD NLSAQLHYPS RFKYLEELLG PILFHWIASG VSLAGLIETS QLFIPNAEPK YFIHFCSHWL LPALLLHEDH TNLDWVAKMA
1201: GQPVVVLVKE NFVPIFSICM GLHCSKTSEC DKGAMVLQNS ILYVGETSEN ERDKLIKQNM VSIVSFILSC ASSSPEPPVP TFSRDTISLA VQTVVDGFLE
1301: NTDYPKNAAI TDRINIFRPD RVFMFITEMH YRMSAACHHR HTRHHLAALE ELTILLGHRA LVPSSLNYIF NLVGQFIGYP SLQDQCCSIA SCLLDLFKSN
1401: PAKEIVSVLG DQLQFLVSKL VTCCIDAEAD TKISGAKSSQ LVNLLHKLVV SSDSSLNEDI RDLEPLPDLK YFQVIRESHI RICEAYSPRN HLLKCSRRSN
1501: YLPPRFLSRS LQALHNKLIA SEVSQEDTNG ETAETFWQSD DEIVNAVWTL VRVSASDEAD SMRLLVSDFL SRIGIRDPHT VVFHLPGNLV SMHGLQGFGH
1601: NTGSKVRSLT ENGISDETLI TLLNFLKKYL LDDSVKIIDV TSQTLRGILS TERGQQALSS FDSCERALIE VHGRGVNLDI VEKILLDSQK QFKAEKFSLE
1701: TPEVWSTDNK NFDRWICQLV YCMIALCEDV PIRLCQNIAL LKAEISELLF PSVVVSLAGR IGMDINLHDL ITSQVKEHIF TDSNKLTKSK QVMLNTLNEL
1801: RMCYVLERSI FSGQTKREKN SRSCSTAAKI RDVESGSNGM AASITTNWEK VYWLSIDYLV VAGSAVVCGA YLTASMYVEY WCEEKFGNLS LGDPDFSYHD
1901: KLPDHVEILV SAITRINEPD SLYGVIHSNK LSAQIITFEH EGNWTRALEY YDLQARSQKM VVPSSLSENL EVEQFQPTTS ARHSVFGEGE VQRQPFKGLI
2001: RSLQQTGCMH VLDLYCRGLT SREGCFQYDP EFIELQYEAA WRAGKWDFSL LYPQTHCQPL QHAKNNNYHE SLHCCLRALQ EGDYDGFYGK LKDTKKELVL
2101: SISRASEEST EFIYSTVVKL QILHHLGLVW DLRWTTSSHQ SVHGYLVKQM ACVDPVIPTM DQLSWLNKDW NSIITQTQLH MTLLEPFIAF RRVLLQILGC
2201: EKCTMQHLLQ SASLLRKGTR FSHAAASLHE FKFLCARSNG QQPVPDWLGK LEEAKLLHAQ GRHEVSISLA NYILHNYQLK EEASDIYRVI GKWLAETRSS
2301: NSRTILEKYL RPAVSLAEEQ SSKICKRLVD RQSQTWFHLA HYADALFKSY EERLSSSEWQ AALRLRKHKT KELEVLIKRF KSSKKAEQSD YSLKIQDLQK
2401: QLTMDKEEAE KLQVDRDNFL KLALEGYKRC LEIGDKYDVR VVFRQVSMWF SLASQKNVID NMLSTIKEVQ SYKFIPLVYQ IASRLGSSKD ESGSNSFQSA
2501: LVSLIRKMAI DHPYHTILQL LALANGDRIK DNQRSRNSFV VDMDKKLAAE HLLQDVSHYH GPMIRQMKQL VDIYIKLAEL ETRREDTNRK VALPREIRSV
2601: KQLELVPVVT ATIPVDRSCQ YNEGSFPFFR GLSDSVTVMN GINAPKVVEC FGSDGQKYKQ LAKSGNDDLR QDAVMEQFFG LVNTFLHNNR DTWKRRLAVR
2701: TYKVIPFTPS AGVLEWVDGT IPLGDYLIGS SRSEGAHGRY GIGNWKYPKC REHMSSAKDK RKAFVDVCTN FRPVMHYFFL EKFLQPADWF VKRLAYTRSV
2801: AASSMVGYIV GLGDRHAMNI LIDQATAEVV HIDLGVAFEQ GLMLKTPERV PFRLTRDIID GMGITGVEGV FRRCCEETLS VMRTNKEALL TIVEVFIHDP
2901: LYKWALSPLK ALQRQKETED YDGMNLEGLQ EEFEGNKDAT RALMRVKQKL DGYEGGEMRS IHGQAQQLIQ DAIDTDRLSH MFPGWGAWM
Arabidopsis Description
ATMSerine/Threonine-kinase ATM-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ79]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.