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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra019530.1-P Field mustard cytosol 96.58 55.33
VIT_17s0000g08350.t01 Wine grape extracellular 15.7 55.07
CDY21811 Canola cytosol 96.75 52.6
Solyc03g112940.2.1 Tomato cytosol 41.85 47.58
AT3G48190.2 Thale cress cytosol, nucleus, plastid 82.0 46.1
GSMUA_Achr6P09120_001 Banana cytosol 12.4 44.3
VIT_17s0000g08330.t01 Wine grape extracellular, mitochondrion, nucleus, plasma membrane 13.4 40.83
KRH63528 Soybean cytosol, nucleus, plasma membrane 50.18 28.03
OQU86543 Sorghum cytosol 37.66 21.02
HORVU3Hr1G000420.22 Barley mitochondrion 36.54 20.88
TraesCS1B01G342800.2 Wheat cytosol 36.42 20.51
Os01t0106700-00 Rice cytosol 29.52 20.44
TraesCS1D01G331500.2 Wheat cytosol 36.36 20.43
TraesCS1A01G329400.1 Wheat cytosol 36.3 20.4
Zm00001d040166_P014 Maize nucleus, plastid 36.54 19.37
CDY46271 Canola plastid 9.21 6.82
CDX99625 Canola cytosol 10.39 6.7
CDY15923 Canola cytosol 10.15 6.53
CDY29333 Canola plastid 9.33 6.41
CDY50976 Canola plastid 9.03 6.26
CDY28135 Canola plastid 8.97 6.13
Solyc03g112950.2.1 Tomato cytosol 5.19 5.86
CDY54069 Canola cytosol, plastid 5.79 3.55
CDY68500 Canola cytosol 0.89 2.91
VIT_17s0000g08360.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, vacuole 1.12 1.75
CDX77893 Canola cytosol 0.41 0.69
CDY71256 Canola cytosol 0.18 0.68
CDY69314 Canola cytosol 0.0 0.0
CDY69250 Canola cytosol 0.0 0.0
CDY45045 Canola cytosol 0.0 0.0
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1MapMan:35.1
InterPro:ARM-type_foldInterPro:ATM_plantEnsemblPlants:CDX77892ProteinID:CDX77892ProteinID:CDX77892.1GO:GO:0003674
GO:GO:0003824GO:GO:0004674GO:GO:0005488GO:GO:0006950GO:GO:0006974GO:GO:0008150
GO:GO:0009987GO:GO:0016301GO:GO:0016740EnsemblPlantsGene:GSBRNA2T00129106001PANTHER:PTHR37079SUPFAM:SSF48371
UniParc:UPI0004EF17A2SEG:seg::::
Description
BnaC03g53270D
Coordinates
chrLK031813:+:1676581..1690811
Molecular Weight (calculated)
190083.0 Da
IEP (calculated)
6.600
GRAVY (calculated)
0.052
Length
1694 amino acids
Sequence
(BLAST)
0001: MKCNDDCETI APLICNTSRV LYYVSTSSFS YIFQDGVKLL NTWLEGDMSI NFCSFLSHNT AKLKLDQIPN AETWPFLVKN LLQCVSMEVS GSKRRIPKPT
0101: FAKALRVVIQ RAEETKFPGV LSPLLSMAKT IFTHIHDILS NTPSFHSEYG IILRHLLEIK EYRFQMRKRT YSNLVMLYIE RAEAGFWEKN SGQHSQKEEA
0201: FRCILTLQSL LENPPGDFSD DIRKEIVNGL IHIFSSARDE EKLSRKLIEC VNSFLLKDGP NIGSLSLEIH NAVQQFVFRC WLTTHDKNLK EILAFYGRLQ
0301: LNLTRGSSES SSLVEQLLNV VTSELDLGSS SSSASWGDST KDGTLSSYQN SLVELAAHVL YRAVVNTTRS SLSEKRARRQ HITLRLVEAL TEGKWLWCAA
0401: FGCLIRTHCT RINKDLLIYW FEAICTNFQR LVEDASMRRS YDGLLWTLRY GVQLSSGLLL PTATIDISKS AVSSSELDRG WQLIWSSLIH GLATFSSMTV
0501: IVDAVLVLLG SIISNNHINV GILPQEVWDH QLFRHIPSEP ALYFIACYFS RMGCQGNLQD DLHLRRNLLR AVCGPLSLKG PLALNERMIR LLPAAALALC
0601: AGFTTTLPLP KEHLPTPPSW DACEVVNDVK MDDAEQERKF GLFECSVEVL TRVYSNSIKI SSYRVPDGVQ LPLVLRDPLL NDMEIYFLSL IPEDSEKGPL
0701: SDIFMGCSLL CHFMHGSYTT RKGKGSTSFF LKACQYLLES LDYAVEAVLK SLYDFQRLGP LGFGSDFNEK SSIIVSLRSL TSSPVFSNRR DQNLLATSYD
0801: TVFHSLEDLL RSFAKVYGEY TEHSWNTQPD TVTSKSLALD PPEVGRIVDM DLDLDVDTKE IDLITAGGKA VAGGPVSTGN WKLGMISLIS CFSPVLQFPT
0901: WDVLYSIMEK ECDPKVLENI LYHLCQLSCL TSMPKVYDLV IFLDDMLNKQ VKNKRNCLNI VTALHVLLQN LLSGMDSSGL KPNSELSLLK GESCQIFVQL
1001: GAMVNKVSEC GLMGWFGRVR LISCICNFVL LNPRIGQTMI ERLLLMLNDS DYRVRFVLAR QIGLLFQTWD GHEALFQDIC SSFGIILVTS SKENLVTARD
1101: VLAAGPQPRP KMETVIITLM HLAYHSENIE LQAVFMMCAV SAIDPCQSRE LIIAALDNLS AQLHYPSRFK YLEELLGPIL FFWIACGVSL AALVETSQLF
1201: ILNAEPKYFI HFCSHWLLPA LLLHEDNTNL DWVAKMASKP ASVLVKENFV PIFSIGMGLH CSKTSECEKG ALVLQNSILY VGQITETERD KLIKRNMVSI
1301: VSFILSRASS SPEPPVPAFS RDTISRAIQT IVDGFLETAD YHKNAAVIDN INVFRPDRVF MFITEIHYKM SAACHHRHTR HHLAALEELT IILGHRALVP
1401: SSLNYIFNLV GQFIASPSLQ DQCCSIASCL LDSFRSNPAK EIVSVLGDQL QFLVSKLVTC CIDAEANSKV SGSKSSQLVN LLHKLIANSE SSLHEDIRDL
1501: EPLPDMEIFR VIRESHIRRC EGYSPRNHLL KCARRSCYLP PRFLSWSLQA LHHKLIATEA SQGESNLETG DSFWHSDDEI VNAVWTLVRV SASDEADSMR
1601: LLASDFLSRV GIGDPHTVVF HLPGELGSMN DLQFVSHNKG SKVSSFTENG VSDETLISLL KILKKYLLDD SVKIIDVTSQ TLRVSFLTLL PIQT
Best Arabidopsis Sequence Match ( AT3G48190.2 )
(BLAST)
0001: MVASRDVHEI VSKLSSDKAK TREDGVKLLN TWLEGERSIT FCRFLSQNTA KLKLDEIPNA ETWPFLVKLL LQCVSMEVSG SKRRMPKPTF AKTLRVVVQR
0101: TEETKFPGVQ FPLLSMAKTL FTHVHDILSN TPSFQSEYGT ILRHLLEIKE YRFQMRKRTY SSLVLLYMER AETGFCEKNS GQHSQKEEAF RYILTLQSLL
0201: ENSPGDFPDD LREEIVNGLI HIFSSVRDEG KLSRKLIECV NTFLLKDGPN LGSLSLEIHN AVEQFVFRCW LTTHDKNLKE ILVSYGRLQL NLTRDSSESS
0301: SLVEQLLDVV TRELDLGSSS SSASWGDTTK DEKLGALSSY QNSLVELAAH VFYRACVNTS RPSLSEKRAR RQHIAMRMVD ALTEGKWLWC AAFGCLVRNY
0401: CARINMDLLI YWFEAICTNF QRLLEDASMR RSYDGLLWTL RSLQGLSSGL SLPDITMDIS KSSASSSELD RGWQSIWSSL IHGLATFSSM SVIVDAVLVL
0501: LGSIISSNHI TVKILPQEVW DHQLFRHIPS EPALYFIACY FSRMGCQGNL QDDLHLRRNL LRAVCAPLSW KVRLTLDERM VQLLPAAAFS LCAGFKVSLP
0601: LPKEHLPTPS QWDVCEQIDD VDRERNFGLF ECSVEALTRI CSNSSKISGC QVPDVVQLPL VLRDPLLHDM DIYFLSIIPE VKEKGPLSDI FMGCALLCHF
0701: MHGSYITRKG KGSSSFFLKA CQYLLEGLDH AVESVSKSLN DLQRRGSLGF GSDFNEKGSI IVSLRSFTQS PVFSNRRDQN LLGASYDFVI HSLENLLRSF
0801: AKVYEEYTEH AWNTHSDTVP SKSLAPDSPE VGRIVDMDLD LAEDTKERDI IAAGGKAVPG LPVSMGNWKL GMVSLISCFS PVLQFPTWDV LYNLLEKESD
0901: PKVLENILYH LCKLSCLTSI PKVDDLVIFL DGMLSTQVKM KRNCLNIVTA LHVLLHTLSS SRRDSSGVEK NCGLSLKEAE SFQVFVQLGA MVNKVSEFGL
1001: LGWFGRVKLI NCICDLVLLN PQTGQTMIER LLLMLSDSDY RVRFVLARQI GILFQTWDGH EALFQDICSS FGIKLVTSSK EKLVTAKDVL AVGPQPRQKM
1101: ETVIITLMHL AYHSENIELQ AVFMMCAVSA KDPCQRELII AALDNLSAQL HYPSRFKYLE ELLGPILFHW IASGVSLAGL IETSQLFIPN AEPKYFIHFC
1201: SHWLLPALLL HEDHTNLDWV AKMAGQPVVV LVKENFVPIF SICMGLHCSK TSECDKGAMV LQNSILYVGE TSENERDKLI KQNMVSIVSF ILSCASSSPE
1301: PPVPTFSRDT ISLAVQTVVD GFLENTDYPK NAAITDRINI FRPDRVFMFI TEMHYRMSAA CHHRHTRHHL AALEELTILL GHRALVPSSL NYIFNLVGQF
1401: IGYPSLQDQC CSIASCLLDL FKSNPAKEIV SVLGDQLQFL VSKLVTCCID AEADTKISGA KSSQLVNLLH KLVVSSDSSL NEDIRDLEPL PDLKYFQVIR
1501: ESHIRICEAY SPRNHLLKCS RRSNYLPPRF LSRSLQALHN KLIASEVSQE DTNGETAETF WQSDDEIVNA VWTLVRVSAS DEADSMRLLV SDFLSRIGIR
1601: DPHTVVFHLP GNLVSMHGLQ GFGHNTGSKV RSLTENGISD ETLITLLNFL KKYLLDDSVK IIDVTSQTLR GILSTERGQQ ALSSFDSCER ALIEVHGRGV
1701: NLDIVEKILL DSQKQFKAEK FSLETPEVWS TDNKNFDRWI CQLVYCMIAL CEDVPIRLCQ NIALLKAEIS ELLFPSVVVS LAGRIGMDIN LHDLITSQVK
1801: EHIFTDSNKL TKSKQVMLNT LNELRMCYVL ERSIFSGQTK REKNSRSCST AAKIRDVESG SNGMAASITT NWEKVYWLSI DYLVVAGSAV VCGAYLTASM
1901: YVEYWCEEKF GNLSLGDPDF SYHDKLPDHV EILVSAITRI NEPDSLYGVI HSNKLSAQII TFEHEGNWTR ALEYYDLQAR SQKMVVPSSL SENLEVEQFQ
2001: PTTSARHSVF GEGEVQRQPF KGLIRSLQQT GCMHVLDLYC RGLTSREGCF QYDPEFIELQ YEAAWRAGKW DFSLLYPQTH CQPLQHAKNN NYHESLHCCL
2101: RALQEGDYDG FYGKLKDTKK ELVLSISRAS EESTEFIYST VVKLQILHHL GLVWDLRWTT SSHQSVHGYL VKQMACVDPV IPTMDQLSWL NKDWNSIITQ
2201: TQLHMTLLEP FIAFRRVLLQ ILGCEKCTMQ HLLQSASLLR KGTRFSHAAA SLHEFKFLCA RSNGQQPVPD WLGKLEEAKL LHAQGRHEVS ISLANYILHN
2301: YQLKEEASDI YRVIGKWLAE TRSSNSRTIL EKYLRPAVSL AEEQSSKICK RLVDRQSQTW FHLAHYADAL FKSYEERLSS SEWQAALRLR KHKTKELEVL
2401: IKRFKSSKKA EQSDYSLKIQ DLQKQLTMDK EEAEKLQVDR DNFLKLALEG YKRCLEIGDK YDVRVVFRQV SMWFSLASQK NVIDNMLSTI KEVQSYKFIP
2501: LVYQIASRLG SSKDESGSNS FQSALVSLIR KMAIDHPYHT ILQLLALANG DRIKDNQRSR NSFVVDMDKK LAAEHLLQDV SHYHGPMIRQ MKQLVDIYIK
2601: LAELETRRED TNRKVALPRE IRSVKQLELV PVVTATIPVD RSCQYNEGSF PFFRGLSDSV TVMNGINAPK VVECFGSDGQ KYKQLAKSGN DDLRQDAVME
2701: QFFGLVNTFL HNNRDTWKRR LAVRTYKVIP FTPSAGVLEW VDGTIPLGDY LIGSSRSEGA HGRYGIGNWK YPKCREHMSS AKDKRKAFVD VCTNFRPVMH
2801: YFFLEKFLQP ADWFVKRLAY TRSVAASSMV GYIVGLGDRH AMNILIDQAT AEVVHIDLGV AFEQGLMLKT PERVPFRLTR DIIDGMGITG VEGVFRRCCE
2901: ETLSVMRTNK EALLTIVEVF IHDPLYKWAL SPLKALQRQK ETEDYDGMNL EGLQEEFEGN KDATRALMRV KQKLDGYEGG EMRSIHGQAQ QLIQDAIDTD
3001: RLSHMFPGWG AWM
Arabidopsis Description
ATMSerine/Threonine-kinase ATM-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ79]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.