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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_17s0000g08360.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, vacuole 63.5 59.01
Solyc03g112950.2.1 Tomato cytosol 65.28 43.97
CDY45045 Canola cytosol 2.67 34.18
Bra019530.1-P Field mustard cytosol 83.19 28.44
AT3G48190.2 Thale cress cytosol, nucleus, plastid 82.1 27.55
CDY21811 Canola cytosol 84.08 27.28
Os01t0106700-00 Rice cytosol 58.46 24.16
CDY71256 Canola cytosol 10.58 24.15
CDY68500 Canola cytosol 11.37 22.29
KRH63528 Soybean cytosol, nucleus, plasma membrane 65.48 21.83
OQU86543 Sorghum cytosol 61.23 20.4
TraesCS1B01G342800.2 Wheat cytosol 59.64 20.05
TraesCS1A01G329400.1 Wheat cytosol 59.64 20.01
TraesCS1D01G331500.2 Wheat cytosol 59.55 19.97
HORVU3Hr1G000420.22 Barley mitochondrion 55.39 18.89
Zm00001d040166_P014 Maize nucleus, plastid 57.96 18.34
CDY15923 Canola cytosol 22.35 8.58
CDX99625 Canola cytosol 22.06 8.49
CDY28135 Canola plastid 19.49 7.95
CDY29333 Canola plastid 18.79 7.71
CDY46271 Canola plastid 16.52 7.3
CDY50976 Canola plastid 16.72 6.91
CDY54069 Canola cytosol, plastid 17.41 6.38
CDY69314 Canola cytosol 1.68 3.4
CDY69250 Canola cytosol 1.68 2.41
VIT_17s0000g08330.t01 Wine grape extracellular, mitochondrion, nucleus, plasma membrane 0.59 1.08
CDX77892 Canola cytosol 0.69 0.41
GSMUA_Achr6P09120_001 Banana cytosol 0.0 0.0
Solyc03g112940.2.1 Tomato cytosol 0.0 0.0
VIT_17s0000g08350.t01 Wine grape extracellular 0.0 0.0
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.1070.11
MapMan:14.1.1MapMan:18.4.7.1Gene3D:3.30.1010.10GO:A0A078CRU6EnsemblPlants:CDX77893ProteinID:CDX77893
ProteinID:CDX77893.1ncoils:CoilInterPro:FATC_domGO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005515GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016043
GO:GO:0016301GO:GO:0016572GO:GO:0016740GO:GO:0019538GO:GO:0090399EnsemblPlantsGene:GSBRNA2T00129107001
InterPro:IPR000403InterPro:IPR003152InterPro:IPR014009InterPro:IPR036940InterPro:Kinase-like_dom_sfPFAM:PF00454
PFAM:PF02260InterPro:PI3/4_kinase_CSInterPro:PI3/4_kinase_cat_domInterPro:PI3/4_kinase_cat_sfInterPro:PIK_FATScanProsite:PS00915
PFscan:PS50290PFscan:PS51189PFscan:PS51190PANTHER:PTHR11139PANTHER:PTHR11139:SF72SMART:SM00146
SMART:SM01343SUPFAM:SSF56112UniParc:UPI0004EE31F1:::
Description
BnaC03g53260D
Coordinates
chrLK031813:+:1699696..1711517
Molecular Weight (calculated)
116163.0 Da
IEP (calculated)
8.791
GRAVY (calculated)
-0.289
Length
1011 amino acids
Sequence
(BLAST)
0001: MQHVKNNNYH ENLHGCLRAL HEGDCNGFHG KLKDAKKELV LSISRASEES TEFIYSAVVK LQILYHLGLV WDLRWTTSSH ESMHGYPVKQ MACADPVTPT
0101: MEQFSWLNKD WISITTQTQF HMNLLEPLVA FRRVLLQILG CEQCTMQHLL QSASLLRKVC MKSYHFTCSK MPARNTLSLM EDNLFQIGLE GYILTFHVLF
0201: NCTYFFLRKI CFTVTFVLFQ IEEAKILHAQ GRHEVAISLA NYILQNYQLK EEASDIYRVI GKWLAETRSS NSRTILDKYL KPAVSLAKNP SSEISKRLVD
0301: RQSQTWFHLA HYADALFKNY EERLSSSEWQ AAMRLRKHKT KELEVLIKRY KSSKKASSCL PPFGEQSDYS LKIQELQKQL TMDKEEAEKL QVRFIPPYNL
0401: AATEKYLLWF HFSEKWPLII HTILSFRDNF LKLALEGYQR CLQIGDKYDV RVVFRQVSMW FNLASQKDVI DNMLSTISEV QSYKFVPLVY QIASRLGSSR
0501: DESGSNSFQS ALVSLLRKMA IDHPYHTILQ LLALANGDRI KDNQRSRNSF VVDIDKKVAA EHLLQDVSQH HGPMIRQMKQ LVDIYIKLAE LETRREDTNK
0601: RVPLPREIRS VKQLELVPVV TATIPVDRSC QYNEGSFPSF RGLSDSVTVM NGINAPKVVE CFGSDGRKYK QLAKSGNDDL RQDAVMEQFF GLVNTFLHNN
0701: RDTWKRRLAV RTYKAYVSVV PFTPSAGVLE WVDGTIPLGD YLIGSSRAGG AHGRYGIGNW NYSKCREHMS SAKDKRKAFM DVCTNFRPVM HYFFLEKFLH
0801: PADWFVKRLA YTHSVAASSM ATVNLSRVGY IVGLGDRHAM NILIDQATAE VIHIDLGVAF EQGLMLKTPE RVPFRLTRDI IDGMGITGVE GVFRRCCEET
0901: LSVMRTNKEA LLTIVEVFIH DPLYKWALSP LKALQRQKET EDYDGVNLEG LQEEFEGNKD AARALMRVKQ KLDGYEGGEM RSIHGQAQQL IQDAIDTDRL
1001: SHMFPGWGAW M
Best Arabidopsis Sequence Match ( AT3G48190.3 )
(BLAST)
0001: MVASRDVHEI VSKLSSDKAK TREDGVKLLN TWLEGERSIT FCRFLSQNTA KLKLDEIPNA ETWPFLVKLL LQCVSMEVSG SKRRMPKPTF AKTLRVVVQR
0101: TEETKFPGVQ FPLLSMAKTL FTHVHDILSN TPSFQSEYGT ILRHLLEIKE YRFQMRKRTY SSLVLLYMER AETGFCEKNS GQHSQKEEAF RYILTLQSLL
0201: ENSPGDFPDD LREEIVNGLI HIFSSVRDEG KLSRKLIECV NTFLLKDGPN LGSLSLEIHN AVEQFVFRCW LTTHDKNLKE ILVSYGRLQL NLTRDSSESS
0301: SLVEQLLDVV TRELDLGSSS SSASWGDTTK DEKLGALSSY QNSLVELAAH VFYRACVNTS RPSLSEKRAR RQHIAMRMVD ALTEGKWLWC AAFGCLVRNY
0401: CARINMDLLI YWFEAICTNF QRLLEDASMR RSYDGLLWTL RSLQGLSSGL SLPDITMDIS KSSASSSELD RGWQSIWSSL IHGLATFSSM SVIVDAVLVL
0501: LGSIISSNHI TVKILPQEVW DHQLFRHIPS EPALYFIACY FSRMGCQVRL TLDERMVQLL PAAAFSLCAG FKVSLPLPKE HLPTPSQWDV CEQIDDVDRE
0601: RNFGLFECSV EALTRICSNS SKISGCQVPD VVQLPLVLRD PLLHDMDIYF LSIIPEVKEK GPLSDIFMGC ALLCHFMHGS YITRKGKGSS SFFLKACQYL
0701: LEGLDHAVES VSKSLNDLQR RGSLGFGSDF NEKGSIIVSL RSFTQSPVFS NRRDQNLLGA SYDFVIHSLE NLLRSFAKVY EEYTEHAWNT HSDTVPSKSL
0801: APDSPEVGRI VDMDLDLAED TKERDIIAAG GKAVPGLPVS MGNWKLGMVS LISCFSPVLQ FPTWDVLYNL LEKESDPKVL ENILYHLCKL SCLTSIPKVD
0901: DLVIFLDGML STQVKMKRNC LNIVTALHVL LHTLSSSRRD SSGVEKNCGL SLKEAESFQV FVQLGAMVNK VSEFGLLGWF GRVKLINCIC DLVLLNPQTG
1001: QTMIERLLLM LSDSDYRVRF VLARQIGILF QTWDGHEALF QDICSSFGIK LVTSSKEKLV TAKDVLAVGP QPRQKMETVI ITLMHLAYHS ENIELQAVFM
1101: MCAVSAKDPC QRELIIAALD NLSAQLHYPS RFKYLEELLG PILFHWIASG VSLAGLIETS QLFIPNAEPK YFIHFCSHWL LPALLLHEDH TNLDWVAKMA
1201: GQPVVVLVKE NFVPIFSICM GLHCSKTSEC DKGAMVLQNS ILYVGETSEN ERDKLIKQNM VSIVSFILSC ASSSPEPPVP TFSRDTISLA VQTVVDGFLE
1301: NTDYPKNAAI TDRINIFRPD RVFMFITEMH YRMSAACHHR HTRHHLAALE ELTILLGHRA LVPSSLNYIF NLVGQFIGYP SLQDQCCSIA SCLLDLFKSN
1401: PAKEIVSVLG DQLQFLVSKL VTCCIDAEAD TKISGAKSSQ LVNLLHKLVV SSDSSLNEDI RDLEPLPDLK YFQVIRESHI RICEAYSPRN HLLKCSRRSN
1501: YLPPRFLSRS LQALHNKLIA SEVSQEDTNG ETAETFWQSD DEIVNAVWTL VRVSASDEAD SMRLLVSDFL SRIGIRDPHT VVFHLPGNLV SMHGLQGFGH
1601: NTGSKVRSLT ENGISDETLI TLLNFLKKYL LDDSVKIIDV TSQTLRGILS TERGQQALSS FDSCERALIE VHGRGVNLDI VEKILLDSQK QFKAEKFSLE
1701: TPEVWSTDNK NFDRWICQLV YCMIALCEDV PIRLCQNIAL LKAEISELLF PSVVVSLAGR IGMDINLHDL ITSQVKEHIF TDSNKLTKSK QVMLNTLNEL
1801: RMCYVLERSI FSGQTKREKN SRSCSTAAKI RDVESGSNGM AASITTNWEK VYWLSIDYLV VAGSAVVCGA YLTASMYVEY WCEEKFGNLS LGDPDFSYHD
1901: KLPDHVEILV SAITRINEPD SLYGVIHSNK LSAQIITFEH EGNWTRALEY YDLQARSQKM VVPSSLSENL EVEQFQPTTS ARHSVFGEGE VQRQPFKGLI
2001: RSLQQTGCMH VLDLYCRGLT SREGCFQYDP EFIELQYEAA WRAGKWDFSL LYPQTHCQPL QHAKNNNYHE SLHCCLRALQ EGDYDGFYGK LKDTKKELVL
2101: SISRASEEST EFIYSTVVKL QILHHLGLVW DLRWTTSSHQ SVHGYLVKQM ACVDPVIPTM DQLSWLNKDW NSIITQTQLH MTLLEPFIAF RRVLLQILGC
2201: EKCTMQHLLQ SASLLRKGTR FSHAAASLHE FKFLCARSNG QQPVPDWLGK LEEAKLLHAQ GRHEVSISLA NYILHNYQLK EEASDIYRVI GKWLAETRSS
2301: NSRTILEKYL RPAVSLAEEQ SSKICKRLVD RQSQTWFHLA HYADALFKSY EERLSSSEWQ AALRLRKHKT KELEVLIKRF KSSKKAEQSD YSLKIQDLQK
2401: QLTMDKEEAE KLQVDRDNFL KLALEGYKRC LEIGDKYDVR VVFRQVSMWF SLASQKNVID NMLSTIKEVQ SYKFIPLVYQ IASRLGSSKD ESGSNSFQSA
2501: LVSLIRKMAI DHPYHTILQL LALANGDRIK DNQRSRNSFV VDMDKKLAAE HLLQDVSHYH GPMIRQMKQL VDIYIKLAEL ETRREDTNRK VALPREIRSV
2601: KQLELVPVVT ATIPVDRSCQ YNEGSFPFFR GLSDSVTVMN GINAPKVVEC FGSDGQKYKQ LAKSGNDDLR QDAVMEQFFG LVNTFLHNNR DTWKRRLAVR
2701: TYKVIPFTPS AGVLEWVDGT IPLGDYLIGS SRSEGAHGRY GIGNWKYPKC REHMSSAKDK RKAFVDVCTN FRPVMHYFFL EKFLQPADWF VKRLAYTRSV
2801: AASSMVGYIV GLGDRHAMNI LIDQATAEVV HIDLGVAFEQ GLMLKTPERV PFRLTRDIID GMGITGVEGV FRRCCEETLS VMRTNKEALL TIVEVFIHDP
2901: LYKWALSPLK ALQRQKETED YDGMNLEGLQ EEFEGNKDAT RALMRVKQKL DGYEGGEMRS IHGQAQQLIQ DAIDTDRLSH MFPGWGAWM
Arabidopsis Description
ATMSerine/Threonine-kinase ATM-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ79]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.