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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • cytosol 1
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G331500.2 Wheat cytosol 95.24 93.67
TraesCS1A01G329400.1 Wheat cytosol 95.18 93.63
TraesCS1B01G342800.2 Wheat cytosol 94.81 93.45
Os01t0106700-00 Rice cytosol 61.21 74.2
OQU86543 Sorghum cytosol 73.96 72.26
Zm00001d040166_P014 Maize nucleus, plastid 71.33 66.2
VIT_17s0000g08360.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, vacuole 23.17 63.14
CDX77893 Canola cytosol 18.89 55.39
Solyc03g112950.2.1 Tomato cytosol 27.96 55.23
GSMUA_Achr6P09140_001 Banana extracellular, plasma membrane 44.35 53.85
KRH63528 Soybean cytosol, nucleus, plasma membrane 48.33 47.25
AT3G48190.2 Thale cress cytosol, nucleus, plastid 46.88 46.13
Bra019530.1-P Field mustard cytosol 44.35 44.47
CDY21811 Canola cytosol 44.82 42.65
CDY68500 Canola cytosol 7.42 42.64
VIT_17s0000g08350.t01 Wine grape extracellular 6.68 40.99
Solyc03g112940.2.1 Tomato cytosol 19.46 38.72
CDX77892 Canola cytosol 20.88 36.54
VIT_17s0000g08330.t01 Wine grape extracellular, mitochondrion, nucleus, plasma membrane 6.27 33.45
HORVU7Hr1G118750.2 Barley plastid 15.65 17.23
HORVU1Hr1G059220.10 Barley nucleus 12.78 15.31
HORVU4Hr1G011510.11 Barley cytosol, nucleus, plastid 9.81 7.79
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.1070.11
MapMan:14.1.1MapMan:18.4.7.1Gene3D:3.30.1010.10UniProt:A0A287JV78InterPro:ARM-type_foldInterPro:ATM_plant
ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004674GO:GO:0005488
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0006950GO:GO:0006974GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:HORVU3Hr1G000420EnsemblPlants:HORVU3Hr1G000420.22InterPro:IPR000403InterPro:IPR014009InterPro:IPR036940InterPro:Kinase-like_dom_sf
PFAM:PF00454InterPro:PI3/4_kinase_CSInterPro:PI3/4_kinase_cat_domInterPro:PI3/4_kinase_cat_sfInterPro:PIK_FATScanProsite:PS00915
ScanProsite:PS00916PFscan:PS50290PFscan:PS51189PANTHER:PTHR37079SMART:SM00146SUPFAM:SSF48371
SUPFAM:SSF56112UniParc:UPI000B489569SEG:seg:::
Description
No Description!
Coordinates
chrchr3H:+:1113810..1159883
Molecular Weight (calculated)
333586.0 Da
IEP (calculated)
7.001
GRAVY (calculated)
-0.094
Length
2965 amino acids
Sequence
(BLAST)
0001: LLLCPALPPN LLRRPPPMTS LPCRAVQEGV KLLGTWLQGD RAPTFCRLLA RNTATATARA KPGQLASGAT WPFLITALAK CVLADMATKR RGATRSAAAG
0101: MLRAAVRCAE DARLSGHSLL LISVAKQLFS HILEVIKDAP SFQLEYSPIL RQLLTVNEYR YQMKPRTYSN LVVLYMKKVA TGFDANFSNQ ASSKEESFRC
0201: TWTLHALLEN PPGDYPDTMR DEVVNGFCAI FSHIRRQDGK LTSKLMECVN TFLLMDGPNL GDKSVEIHNA VQDFILRSWL MTRDLRLKSL FIAYAKIQLK
0301: LARAIPKVLE RKNLLGVIMD DLDQNVNTEA GLLWCEASRD AKDVSLRCSL EELMDLSATV FYQAYKSPAP MRGDDEKKLK TEDVISRITN SLKKGSLCWI
0401: GTVCLLVHKY GYRVDKTLLI SWLQACCQSL KSALSKANVI RSQDSLLWII RALKEFSAML IVNTREESHC LLTKSEMSTV EGYWQDIWNA LIHALPLFSP
0501: TALVADSALN LLGGMIMRDQ VRTSVVSEDT WNLQTFKQSP SSSALYFIAC YFSRIGLQGD LSNASLVRKN LLRSTLELIQ SVSKGSSLLN EKNVVMIPEA
0601: IFSICAGFSS SAINSADASQ LFDECKDFSK LLLEGENWVI KDELGYSVEA LSEISTESSS KVISDKCNRA HLPGHIQQQL LDQLMEFKEF MASNEQLEKA
0701: DLCTLVYRCS LLCNLIHCAL LSRAIEEKSL FLKELFGYVT GIIKYMISMV MKKHEELSHG LTSVGSAFET AGSILSSFQT FLSAPIFRLR SVSNRASSEL
0801: IKGVTKLLDE LLVEFSQLFS CLSSSVNTSD SENTSKMFPI SSVNLSEDLN PFVGHKSVVD MDFDMADSGE VDSITASVSG SIGISSRLSE WKLELVGVIS
0901: TFFSVSAPHT WEILYNLVEK ESDTKVSQAI LLNLCQNISA SSKSLSSVVH LIFNMRDKCA SLLLGSADCL THLHALLRTL MATRDVGQNT DGKPQAYNEV
1001: SNENQDILLD LVTKGTEISI TDWFFRIKLI DCISHFIHLF PDGAQDMIGH LLNMLHDTDY RVRLYLARKM VVLFQTWEGH DELFRDVCSN IGVKMVQFSS
1101: EIPVKSREVL AVGPQSVPVI ETVLITLAHL SVYSEEVEFE CAFMISAVAA IQPFERKLEY ALFDSISRKL CYASRSKYLD QLMGPILFRW VACEVSLVSL
1201: VKVQEMFGFD TAKPKEFIEH ICPWLLSFLI LRGDAAGLNW ISKTLLQPLS AVIKTYFVQI FGLCIAAKNG TGPEKDLAET VLYESLLQLG EISEFERDGL
1301: IRKHMVSIVG VLLTVSSTAR QSELPYFSRE ILAHTIKQVV DGFVETADDD SADTVVIDKV NIFRADRVFK FLLAIHQQVT EAGHPRHMSH RLCAIEVLID
1401: VLGHRVVHYS TCFYIICILG NYIWRQTLQG QCCNILSKLL AAFNANSSTE TVAVLGTQLQ VLVPKLITCC LPNDREGGRP HGDLSKVLSL LHQLTVDADP
1501: LLYDYIRDLE PLPGVDCLKD IKVFHASLSD SYASRDQFLK FVQRAPHLPP ELFLLSLRTH HKKLLSGEII CRGDVSAGHA DTVSCWGSDP DVVSAVWTLV
1601: DFCSSSSVAN EASSVLADFI SRAGISDAHQ VIFDVPNLTQ KHSLQLQSGS TSKEDKMCSD YGISDDILLE LLKLLKTYLS DESVEIIDVS SRTLKGILST
1701: SKGLNSLQRL DSLDRSLLMV HSRGINTQLV EQTLLGMDKY STVSLEDSDI WQTDGRPYKQ WLCTLVSSLI SHCDDIILRL CRSLVFLKVE AAELLLASAL
1801: VNIAGNMDSI SSICGLISSK VEQIIFCDSN HLMKSVKLFL DALNVVRSFY VTERARASPY NTRASPSPYN TPKDGSRSAR SKSRSPAATP SSSWKKVYWL
1901: SVDYLVAARA AQRCSCDFAT LMYVELWCEE QFNKLELGPP DFSQQESLPP HVGLLVDAFT HINEPDSIYG ITLANEVASQ IIRYEHEGNW SSALEYYDLL
2001: VRSTPKENLA DFAGTVLTGP SASSKAEGNL LNWKMHKGLM RSLQKTGCSH VLDIYSQGLT NQKTCLQQDS EFIDIQYEAA WRAGNWDFSF FVPYSSQPSS
2101: RSRDYSLFNE NLHSCLRALQ NGDSEKFQGK LSHSKMDLVL DLSNASKEST KYIHSTVLKL QMLDHLSMAW ELRWKFCPDQ APKSNVGTEE FSLVPAVPKR
2201: NQLELLSKEW NFILCQTERN LDLFEPFLAF RRGLLKILGS EEHLIEHLFQ SASALRKGLR FSLAAASLYE LKELCCHRDQ QTVPSTYFLS KLEEAKLLRA
2301: QGQHDMAIGL GKYILKNHTD ERDKSDVYRL VGKWLAETRS SNSRTIIEDY LNHSVALDKK YMSRQCRTHF HLAHYTYNLF KSYEERLSSN EWQAALRLRK
2401: YKTKELDTLL KRLKSSSKAE KSDYGAKIQE LQKQLALDRE EAQKIQDDRD EFLSLALEGY QRSLVVGGKY DLQVVFRLVS LWFNLFSRKQ VVDSMIKTTK
2501: EVQTYKFIPL VYQIASRLGS SKDAQGSTNF QNALASLLKK MAIDHPYHTI CQLLALANGD RVKDKQRSRS SFVVDMDKKL AAENLLKELS SFHGALIRQM
2601: KQMVEIYIRL AELETRKEDT NKKISLPREF RSICQLELAK VPVVTATIPV DPNCRYEEGT FPHFSGLVDS ITIMNGINAP KVIQCIGSDG NRYRQLAKSG
2701: NDDLRQDAVM EQFFSLVNMF LQNHRDTSER RLRIRTYNVV PFTPSAGVVE WVNRTIPLGD YLLDSNRIGG AHARYGTGDW TFMQCREHLA CEKDKRKAFF
2801: KICDNFRPVM HHFFIERFLQ PADWFQSRLA YTRSVAASSM VGYIVGLGDR HSMNILIDED TAEVVHIDLG VAFEQGLMLK TPERVPFRLT RDIIDGMGVT
2901: GTEGVFKRCC EKTLSVMREN KEALLTIIEV FIHDPLYKWA LSPLKALQRQ KETEYNDSCL DDSQE
Best Arabidopsis Sequence Match ( AT3G48190.2 )
(BLAST)
0001: MVASRDVHEI VSKLSSDKAK TREDGVKLLN TWLEGERSIT FCRFLSQNTA KLKLDEIPNA ETWPFLVKLL LQCVSMEVSG SKRRMPKPTF AKTLRVVVQR
0101: TEETKFPGVQ FPLLSMAKTL FTHVHDILSN TPSFQSEYGT ILRHLLEIKE YRFQMRKRTY SSLVLLYMER AETGFCEKNS GQHSQKEEAF RYILTLQSLL
0201: ENSPGDFPDD LREEIVNGLI HIFSSVRDEG KLSRKLIECV NTFLLKDGPN LGSLSLEIHN AVEQFVFRCW LTTHDKNLKE ILVSYGRLQL NLTRDSSESS
0301: SLVEQLLDVV TRELDLGSSS SSASWGDTTK DEKLGALSSY QNSLVELAAH VFYRACVNTS RPSLSEKRAR RQHIAMRMVD ALTEGKWLWC AAFGCLVRNY
0401: CARINMDLLI YWFEAICTNF QRLLEDASMR RSYDGLLWTL RSLQGLSSGL SLPDITMDIS KSSASSSELD RGWQSIWSSL IHGLATFSSM SVIVDAVLVL
0501: LGSIISSNHI TVKILPQEVW DHQLFRHIPS EPALYFIACY FSRMGCQGNL QDDLHLRRNL LRAVCAPLSW KVRLTLDERM VQLLPAAAFS LCAGFKVSLP
0601: LPKEHLPTPS QWDVCEQIDD VDRERNFGLF ECSVEALTRI CSNSSKISGC QVPDVVQLPL VLRDPLLHDM DIYFLSIIPE VKEKGPLSDI FMGCALLCHF
0701: MHGSYITRKG KGSSSFFLKA CQYLLEGLDH AVESVSKSLN DLQRRGSLGF GSDFNEKGSI IVSLRSFTQS PVFSNRRDQN LLGASYDFVI HSLENLLRSF
0801: AKVYEEYTEH AWNTHSDTVP SKSLAPDSPE VGRIVDMDLD LAEDTKERDI IAAGGKAVPG LPVSMGNWKL GMVSLISCFS PVLQFPTWDV LYNLLEKESD
0901: PKVLENILYH LCKLSCLTSI PKVDDLVIFL DGMLSTQVKM KRNCLNIVTA LHVLLHTLSS SRRDSSGVEK NCGLSLKEAE SFQVFVQLGA MVNKVSEFGL
1001: LGWFGRVKLI NCICDLVLLN PQTGQTMIER LLLMLSDSDY RVRFVLARQI GILFQTWDGH EALFQDICSS FGIKLVTSSK EKLVTAKDVL AVGPQPRQKM
1101: ETVIITLMHL AYHSENIELQ AVFMMCAVSA KDPCQRELII AALDNLSAQL HYPSRFKYLE ELLGPILFHW IASGVSLAGL IETSQLFIPN AEPKYFIHFC
1201: SHWLLPALLL HEDHTNLDWV AKMAGQPVVV LVKENFVPIF SICMGLHCSK TSECDKGAMV LQNSILYVGE TSENERDKLI KQNMVSIVSF ILSCASSSPE
1301: PPVPTFSRDT ISLAVQTVVD GFLENTDYPK NAAITDRINI FRPDRVFMFI TEMHYRMSAA CHHRHTRHHL AALEELTILL GHRALVPSSL NYIFNLVGQF
1401: IGYPSLQDQC CSIASCLLDL FKSNPAKEIV SVLGDQLQFL VSKLVTCCID AEADTKISGA KSSQLVNLLH KLVVSSDSSL NEDIRDLEPL PDLKYFQVIR
1501: ESHIRICEAY SPRNHLLKCS RRSNYLPPRF LSRSLQALHN KLIASEVSQE DTNGETAETF WQSDDEIVNA VWTLVRVSAS DEADSMRLLV SDFLSRIGIR
1601: DPHTVVFHLP GNLVSMHGLQ GFGHNTGSKV RSLTENGISD ETLITLLNFL KKYLLDDSVK IIDVTSQTLR GILSTERGQQ ALSSFDSCER ALIEVHGRGV
1701: NLDIVEKILL DSQKQFKAEK FSLETPEVWS TDNKNFDRWI CQLVYCMIAL CEDVPIRLCQ NIALLKAEIS ELLFPSVVVS LAGRIGMDIN LHDLITSQVK
1801: EHIFTDSNKL TKSKQVMLNT LNELRMCYVL ERSIFSGQTK REKNSRSCST AAKIRDVESG SNGMAASITT NWEKVYWLSI DYLVVAGSAV VCGAYLTASM
1901: YVEYWCEEKF GNLSLGDPDF SYHDKLPDHV EILVSAITRI NEPDSLYGVI HSNKLSAQII TFEHEGNWTR ALEYYDLQAR SQKMVVPSSL SENLEVEQFQ
2001: PTTSARHSVF GEGEVQRQPF KGLIRSLQQT GCMHVLDLYC RGLTSREGCF QYDPEFIELQ YEAAWRAGKW DFSLLYPQTH CQPLQHAKNN NYHESLHCCL
2101: RALQEGDYDG FYGKLKDTKK ELVLSISRAS EESTEFIYST VVKLQILHHL GLVWDLRWTT SSHQSVHGYL VKQMACVDPV IPTMDQLSWL NKDWNSIITQ
2201: TQLHMTLLEP FIAFRRVLLQ ILGCEKCTMQ HLLQSASLLR KGTRFSHAAA SLHEFKFLCA RSNGQQPVPD WLGKLEEAKL LHAQGRHEVS ISLANYILHN
2301: YQLKEEASDI YRVIGKWLAE TRSSNSRTIL EKYLRPAVSL AEEQSSKICK RLVDRQSQTW FHLAHYADAL FKSYEERLSS SEWQAALRLR KHKTKELEVL
2401: IKRFKSSKKA EQSDYSLKIQ DLQKQLTMDK EEAEKLQVDR DNFLKLALEG YKRCLEIGDK YDVRVVFRQV SMWFSLASQK NVIDNMLSTI KEVQSYKFIP
2501: LVYQIASRLG SSKDESGSNS FQSALVSLIR KMAIDHPYHT ILQLLALANG DRIKDNQRSR NSFVVDMDKK LAAEHLLQDV SHYHGPMIRQ MKQLVDIYIK
2601: LAELETRRED TNRKVALPRE IRSVKQLELV PVVTATIPVD RSCQYNEGSF PFFRGLSDSV TVMNGINAPK VVECFGSDGQ KYKQLAKSGN DDLRQDAVME
2701: QFFGLVNTFL HNNRDTWKRR LAVRTYKVIP FTPSAGVLEW VDGTIPLGDY LIGSSRSEGA HGRYGIGNWK YPKCREHMSS AKDKRKAFVD VCTNFRPVMH
2801: YFFLEKFLQP ADWFVKRLAY TRSVAASSMV GYIVGLGDRH AMNILIDQAT AEVVHIDLGV AFEQGLMLKT PERVPFRLTR DIIDGMGITG VEGVFRRCCE
2901: ETLSVMRTNK EALLTIVEVF IHDPLYKWAL SPLKALQRQK ETEDYDGMNL EGLQEEFEGN KDATRALMRV KQKLDGYEGG EMRSIHGQAQ QLIQDAIDTD
3001: RLSHMFPGWG AWM
Arabidopsis Description
ATMSerine/Threonine-kinase ATM-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ79]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.