Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g112940.2.1 | Tomato | cytosol | 50.84 | 16.17 |
| CDX77892 | Canola | cytosol | 44.3 | 12.4 |
| KRH63528 | Soybean | cytosol, nucleus, plasma membrane | 54.43 | 8.51 |
| AT3G48190.2 | Thale cress | cytosol, nucleus, plastid | 49.16 | 7.73 |
| Bra019530.1-P | Field mustard | cytosol | 46.84 | 7.51 |
| CDY21811 | Canola | cytosol | 47.05 | 7.16 |
| GSMUA_Achr1P26290_001 | Banana | plastid | 12.03 | 2.31 |
| VIT_17s0000g08330.t01 | Wine grape | extracellular, mitochondrion, nucleus, plasma membrane | 2.32 | 1.98 |
| VIT_17s0000g08350.t01 | Wine grape | extracellular | 1.9 | 1.86 |
| GSMUA_Achr4P01370_001 | Banana | nucleus | 8.65 | 1.66 |
| GSMUA_Achr3P30770_001 | Banana | cytosol, plasma membrane | 5.49 | 0.7 |
| GSMUA_Achr6P09140_001 | Banana | extracellular, plasma membrane | 2.32 | 0.45 |
| CDY68500 | Canola | cytosol | 0.21 | 0.19 |
| VIT_17s0000g08360.t01 | Wine grape | cytosol, endoplasmic reticulum, mitochondrion, vacuole | 0.21 | 0.09 |
| CDX77893 | Canola | cytosol | 0.0 | 0.0 |
| Solyc03g112950.2.1 | Tomato | cytosol | 0.0 | 0.0 |
Protein Annotations
| KEGG:04150+2.7.11.1 | KEGG:04151+2.7.11.1 | KEGG:04714+2.7.11.1 | KEGG:04926+2.7.11.1 | KEGG:05165+2.7.11.1 | MapMan:35.1 |
| InterPro:ATM_plant | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004674 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0006950 | GO:GO:0006974 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr6G09120_001 | EnsemblPlants:GSMUA_Achr6P09120_001 | EnsemblPlants:GSMUA_Achr6T09120_001 | UniProt:M0T5G1 |
| PANTHER:PTHR37079 | UniParc:UPI00029613C8 | SEG:seg | : | : | : |
Description
Putative Serine/threonine-protein kinase ATM [Source:GMGC_GENE;Acc:GSMUA_Achr6G09120_001]
Coordinates
chr6:+:6064792..6072679
Molecular Weight (calculated)
54190.6 Da
IEP (calculated)
9.650
GRAVY (calculated)
0.032
Length
474 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSRDVQEI VSKLSSDKAK AREEGVKLLS SWLEGERAAG FCKLLGHNTA KIKADSIPHA ETWPFLITLI MKCISLEVSA SKKRLPRLIF VKTLRSSIQC
101: AEDIKLSGRN FLLLSVVKVL FSHIWDVIKD IPSFQSEYSS ILRHLLTVRE YRYQMRKRVY SGLVVLYINK LGTVIDMNTS HTSSKEDVFR SIVILHVLLE
201: NPPGDYPDNI REDVVKGFIM IFSKIRNEGK ILRKLVECLN TYLLRDGPNL GNQAMEIHFA VQDIMFRCWF TSHDQGLKSS LINFARIQLK LIRYLAEGTQ
301: IIEQLLDLAI FGLLLLAYVA INFRNDISRE DKLGTLGSIQ QCLMELAATV FYQALACKIN SKSTCDVKRL KMEHAAVRLK DGLIKGSWIW NGAFAFFIHN
401: YGLRLDKALL IYWFEGAGES LRRILSGSGT LHSHDALLWL LRYAIHHCCN VFHPLFFMIN EKKKDKNERI ESSS
101: AEDIKLSGRN FLLLSVVKVL FSHIWDVIKD IPSFQSEYSS ILRHLLTVRE YRYQMRKRVY SGLVVLYINK LGTVIDMNTS HTSSKEDVFR SIVILHVLLE
201: NPPGDYPDNI REDVVKGFIM IFSKIRNEGK ILRKLVECLN TYLLRDGPNL GNQAMEIHFA VQDIMFRCWF TSHDQGLKSS LINFARIQLK LIRYLAEGTQ
301: IIEQLLDLAI FGLLLLAYVA INFRNDISRE DKLGTLGSIQ QCLMELAATV FYQALACKIN SKSTCDVKRL KMEHAAVRLK DGLIKGSWIW NGAFAFFIHN
401: YGLRLDKALL IYWFEGAGES LRRILSGSGT LHSHDALLWL LRYAIHHCCN VFHPLFFMIN EKKKDKNERI ESSS
0001: MVASRDVHEI VSKLSSDKAK TREDGVKLLN TWLEGERSIT FCRFLSQNTA KLKLDEIPNA ETWPFLVKLL LQCVSMEVSG SKRRMPKPTF AKTLRVVVQR
0101: TEETKFPGVQ FPLLSMAKTL FTHVHDILSN TPSFQSEYGT ILRHLLEIKE YRFQMRKRTY SSLVLLYMER AETGFCEKNS GQHSQKEEAF RYILTLQSLL
0201: ENSPGDFPDD LREEIVNGLI HIFSSVRDEG KLSRKLIECV NTFLLKDGPN LGSLSLEIHN AVEQFVFRCW LTTHDKNLKE ILVSYGRLQL NLTRDSSESS
0301: SLVEQLLDVV TRELDLGSSS SSASWGDTTK DEKLGALSSY QNSLVELAAH VFYRACVNTS RPSLSEKRAR RQHIAMRMVD ALTEGKWLWC AAFGCLVRNY
0401: CARINMDLLI YWFEAICTNF QRLLEDASMR RSYDGLLWTL RSLQGLSSGL SLPDITMDIS KSSASSSELD RGWQSIWSSL IHGLATFSSM SVIVDAVLVL
0501: LGSIISSNHI TVKILPQEVW DHQLFRHIPS EPALYFIACY FSRMGCQVRL TLDERMVQLL PAAAFSLCAG FKVSLPLPKE HLPTPSQWDV CEQIDDVDRE
0601: RNFGLFECSV EALTRICSNS SKISGCQVPD VVQLPLVLRD PLLHDMDIYF LSIIPEVKEK GPLSDIFMGC ALLCHFMHGS YITRKGKGSS SFFLKACQYL
0701: LEGLDHAVES VSKSLNDLQR RGSLGFGSDF NEKGSIIVSL RSFTQSPVFS NRRDQNLLGA SYDFVIHSLE NLLRSFAKVY EEYTEHAWNT HSDTVPSKSL
0801: APDSPEVGRI VDMDLDLAED TKERDIIAAG GKAVPGLPVS MGNWKLGMVS LISCFSPVLQ FPTWDVLYNL LEKESDPKVL ENILYHLCKL SCLTSIPKVD
0901: DLVIFLDGML STQVKMKRNC LNIVTALHVL LHTLSSSRRD SSGVEKNCGL SLKEAESFQV FVQLGAMVNK VSEFGLLGWF GRVKLINCIC DLVLLNPQTG
1001: QTMIERLLLM LSDSDYRVRF VLARQIGILF QTWDGHEALF QDICSSFGIK LVTSSKEKLV TAKDVLAVGP QPRQKMETVI ITLMHLAYHS ENIELQAVFM
1101: MCAVSAKDPC QRELIIAALD NLSAQLHYPS RFKYLEELLG PILFHWIASG VSLAGLIETS QLFIPNAEPK YFIHFCSHWL LPALLLHEDH TNLDWVAKMA
1201: GQPVVVLVKE NFVPIFSICM GLHCSKTSEC DKGAMVLQNS ILYVGETSEN ERDKLIKQNM VSIVSFILSC ASSSPEPPVP TFSRDTISLA VQTVVDGFLE
1301: NTDYPKNAAI TDRINIFRPD RVFMFITEMH YRMSAACHHR HTRHHLAALE ELTILLGHRA LVPSSLNYIF NLVGQFIGYP SLQDQCCSIA SCLLDLFKSN
1401: PAKEIVSVLG DQLQFLVSKL VTCCIDAEAD TKISGAKSSQ LVNLLHKLVV SSDSSLNEDI RDLEPLPDLK YFQVIRESHI RICEAYSPRN HLLKCSRRSN
1501: YLPPRFLSRS LQALHNKLIA SEVSQEDTNG ETAETFWQSD DEIVNAVWTL VRVSASDEAD SMRLLVSDFL SRIGIRDPHT VVFHLPGNLV SMHGLQGFGH
1601: NTGSKVRSLT ENGISDETLI TLLNFLKKYL LDDSVKIIDV TSQTLRGILS TERGQQALSS FDSCERALIE VHGRGVNLDI VEKILLDSQK QFKAEKFSLE
1701: TPEVWSTDNK NFDRWICQLV YCMIALCEDV PIRLCQNIAL LKAEISELLF PSVVVSLAGR IGMDINLHDL ITSQVKEHIF TDSNKLTKSK QVMLNTLNEL
1801: RMCYVLERSI FSGQTKREKN SRSCSTAAKI RDVESGSNGM AASITTNWEK VYWLSIDYLV VAGSAVVCGA YLTASMYVEY WCEEKFGNLS LGDPDFSYHD
1901: KLPDHVEILV SAITRINEPD SLYGVIHSNK LSAQIITFEH EGNWTRALEY YDLQARSQKM VVPSSLSENL EVEQFQPTTS ARHSVFGEGE VQRQPFKGLI
2001: RSLQQTGCMH VLDLYCRGLT SREGCFQYDP EFIELQYEAA WRAGKWDFSL LYPQTHCQPL QHAKNNNYHE SLHCCLRALQ EGDYDGFYGK LKDTKKELVL
2101: SISRASEEST EFIYSTVVKL QILHHLGLVW DLRWTTSSHQ SVHGYLVKQM ACVDPVIPTM DQLSWLNKDW NSIITQTQLH MTLLEPFIAF RRVLLQILGC
2201: EKCTMQHLLQ SASLLRKGTR FSHAAASLHE FKFLCARSNG QQPVPDWLGK LEEAKLLHAQ GRHEVSISLA NYILHNYQLK EEASDIYRVI GKWLAETRSS
2301: NSRTILEKYL RPAVSLAEEQ SSKICKRLVD RQSQTWFHLA HYADALFKSY EERLSSSEWQ AALRLRKHKT KELEVLIKRF KSSKKAEQSD YSLKIQDLQK
2401: QLTMDKEEAE KLQVDRDNFL KLALEGYKRC LEIGDKYDVR VVFRQVSMWF SLASQKNVID NMLSTIKEVQ SYKFIPLVYQ IASRLGSSKD ESGSNSFQSA
2501: LVSLIRKMAI DHPYHTILQL LALANGDRIK DNQRSRNSFV VDMDKKLAAE HLLQDVSHYH GPMIRQMKQL VDIYIKLAEL ETRREDTNRK VALPREIRSV
2601: KQLELVPVVT ATIPVDRSCQ YNEGSFPFFR GLSDSVTVMN GINAPKVVEC FGSDGQKYKQ LAKSGNDDLR QDAVMEQFFG LVNTFLHNNR DTWKRRLAVR
2701: TYKVIPFTPS AGVLEWVDGT IPLGDYLIGS SRSEGAHGRY GIGNWKYPKC REHMSSAKDK RKAFVDVCTN FRPVMHYFFL EKFLQPADWF VKRLAYTRSV
2801: AASSMVGYIV GLGDRHAMNI LIDQATAEVV HIDLGVAFEQ GLMLKTPERV PFRLTRDIID GMGITGVEGV FRRCCEETLS VMRTNKEALL TIVEVFIHDP
2901: LYKWALSPLK ALQRQKETED YDGMNLEGLQ EEFEGNKDAT RALMRVKQKL DGYEGGEMRS IHGQAQQLIQ DAIDTDRLSH MFPGWGAWM
0101: TEETKFPGVQ FPLLSMAKTL FTHVHDILSN TPSFQSEYGT ILRHLLEIKE YRFQMRKRTY SSLVLLYMER AETGFCEKNS GQHSQKEEAF RYILTLQSLL
0201: ENSPGDFPDD LREEIVNGLI HIFSSVRDEG KLSRKLIECV NTFLLKDGPN LGSLSLEIHN AVEQFVFRCW LTTHDKNLKE ILVSYGRLQL NLTRDSSESS
0301: SLVEQLLDVV TRELDLGSSS SSASWGDTTK DEKLGALSSY QNSLVELAAH VFYRACVNTS RPSLSEKRAR RQHIAMRMVD ALTEGKWLWC AAFGCLVRNY
0401: CARINMDLLI YWFEAICTNF QRLLEDASMR RSYDGLLWTL RSLQGLSSGL SLPDITMDIS KSSASSSELD RGWQSIWSSL IHGLATFSSM SVIVDAVLVL
0501: LGSIISSNHI TVKILPQEVW DHQLFRHIPS EPALYFIACY FSRMGCQVRL TLDERMVQLL PAAAFSLCAG FKVSLPLPKE HLPTPSQWDV CEQIDDVDRE
0601: RNFGLFECSV EALTRICSNS SKISGCQVPD VVQLPLVLRD PLLHDMDIYF LSIIPEVKEK GPLSDIFMGC ALLCHFMHGS YITRKGKGSS SFFLKACQYL
0701: LEGLDHAVES VSKSLNDLQR RGSLGFGSDF NEKGSIIVSL RSFTQSPVFS NRRDQNLLGA SYDFVIHSLE NLLRSFAKVY EEYTEHAWNT HSDTVPSKSL
0801: APDSPEVGRI VDMDLDLAED TKERDIIAAG GKAVPGLPVS MGNWKLGMVS LISCFSPVLQ FPTWDVLYNL LEKESDPKVL ENILYHLCKL SCLTSIPKVD
0901: DLVIFLDGML STQVKMKRNC LNIVTALHVL LHTLSSSRRD SSGVEKNCGL SLKEAESFQV FVQLGAMVNK VSEFGLLGWF GRVKLINCIC DLVLLNPQTG
1001: QTMIERLLLM LSDSDYRVRF VLARQIGILF QTWDGHEALF QDICSSFGIK LVTSSKEKLV TAKDVLAVGP QPRQKMETVI ITLMHLAYHS ENIELQAVFM
1101: MCAVSAKDPC QRELIIAALD NLSAQLHYPS RFKYLEELLG PILFHWIASG VSLAGLIETS QLFIPNAEPK YFIHFCSHWL LPALLLHEDH TNLDWVAKMA
1201: GQPVVVLVKE NFVPIFSICM GLHCSKTSEC DKGAMVLQNS ILYVGETSEN ERDKLIKQNM VSIVSFILSC ASSSPEPPVP TFSRDTISLA VQTVVDGFLE
1301: NTDYPKNAAI TDRINIFRPD RVFMFITEMH YRMSAACHHR HTRHHLAALE ELTILLGHRA LVPSSLNYIF NLVGQFIGYP SLQDQCCSIA SCLLDLFKSN
1401: PAKEIVSVLG DQLQFLVSKL VTCCIDAEAD TKISGAKSSQ LVNLLHKLVV SSDSSLNEDI RDLEPLPDLK YFQVIRESHI RICEAYSPRN HLLKCSRRSN
1501: YLPPRFLSRS LQALHNKLIA SEVSQEDTNG ETAETFWQSD DEIVNAVWTL VRVSASDEAD SMRLLVSDFL SRIGIRDPHT VVFHLPGNLV SMHGLQGFGH
1601: NTGSKVRSLT ENGISDETLI TLLNFLKKYL LDDSVKIIDV TSQTLRGILS TERGQQALSS FDSCERALIE VHGRGVNLDI VEKILLDSQK QFKAEKFSLE
1701: TPEVWSTDNK NFDRWICQLV YCMIALCEDV PIRLCQNIAL LKAEISELLF PSVVVSLAGR IGMDINLHDL ITSQVKEHIF TDSNKLTKSK QVMLNTLNEL
1801: RMCYVLERSI FSGQTKREKN SRSCSTAAKI RDVESGSNGM AASITTNWEK VYWLSIDYLV VAGSAVVCGA YLTASMYVEY WCEEKFGNLS LGDPDFSYHD
1901: KLPDHVEILV SAITRINEPD SLYGVIHSNK LSAQIITFEH EGNWTRALEY YDLQARSQKM VVPSSLSENL EVEQFQPTTS ARHSVFGEGE VQRQPFKGLI
2001: RSLQQTGCMH VLDLYCRGLT SREGCFQYDP EFIELQYEAA WRAGKWDFSL LYPQTHCQPL QHAKNNNYHE SLHCCLRALQ EGDYDGFYGK LKDTKKELVL
2101: SISRASEEST EFIYSTVVKL QILHHLGLVW DLRWTTSSHQ SVHGYLVKQM ACVDPVIPTM DQLSWLNKDW NSIITQTQLH MTLLEPFIAF RRVLLQILGC
2201: EKCTMQHLLQ SASLLRKGTR FSHAAASLHE FKFLCARSNG QQPVPDWLGK LEEAKLLHAQ GRHEVSISLA NYILHNYQLK EEASDIYRVI GKWLAETRSS
2301: NSRTILEKYL RPAVSLAEEQ SSKICKRLVD RQSQTWFHLA HYADALFKSY EERLSSSEWQ AALRLRKHKT KELEVLIKRF KSSKKAEQSD YSLKIQDLQK
2401: QLTMDKEEAE KLQVDRDNFL KLALEGYKRC LEIGDKYDVR VVFRQVSMWF SLASQKNVID NMLSTIKEVQ SYKFIPLVYQ IASRLGSSKD ESGSNSFQSA
2501: LVSLIRKMAI DHPYHTILQL LALANGDRIK DNQRSRNSFV VDMDKKLAAE HLLQDVSHYH GPMIRQMKQL VDIYIKLAEL ETRREDTNRK VALPREIRSV
2601: KQLELVPVVT ATIPVDRSCQ YNEGSFPFFR GLSDSVTVMN GINAPKVVEC FGSDGQKYKQ LAKSGNDDLR QDAVMEQFFG LVNTFLHNNR DTWKRRLAVR
2701: TYKVIPFTPS AGVLEWVDGT IPLGDYLIGS SRSEGAHGRY GIGNWKYPKC REHMSSAKDK RKAFVDVCTN FRPVMHYFFL EKFLQPADWF VKRLAYTRSV
2801: AASSMVGYIV GLGDRHAMNI LIDQATAEVV HIDLGVAFEQ GLMLKTPERV PFRLTRDIID GMGITGVEGV FRRCCEETLS VMRTNKEALL TIVEVFIHDP
2901: LYKWALSPLK ALQRQKETED YDGMNLEGLQ EEFEGNKDAT RALMRVKQKL DGYEGGEMRS IHGQAQQLIQ DAIDTDRLSH MFPGWGAWM
Arabidopsis Description
ATMSerine/Threonine-kinase ATM-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ79]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.