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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 7
  • golgi 5
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g051620.2.1 Tomato cytosol, mitochondrion 92.11 80.53
CDY01144 Canola cytosol 63.16 66.38
PGSC0003DMT400069760 Potato mitochondrion 75.51 63.76
VIT_13s0067g00900.t01 Wine grape mitochondrion 73.89 61.55
Bra040049.1-P Field mustard cytosol 66.19 60.33
CDY27998 Canola cytosol 66.19 59.89
KRH31148 Soybean mitochondrion 71.46 59.63
KRG97732 Soybean mitochondrion 70.85 59.12
GSMUA_Achr10P... Banana mitochondrion 60.73 58.14
CDY47356 Canola mitochondrion 66.19 57.98
Bra032722.1-P Field mustard mitochondrion 65.79 57.73
KRH73190 Soybean endoplasmic reticulum 69.64 57.33
Bra029697.1-P Field mustard mitochondrion 65.38 57.27
KRH14945 Soybean mitochondrion 69.43 57.17
AT3G08510.1 Thale cress mitochondrion 66.4 56.45
CDY22153 Canola mitochondrion 66.19 56.28
CDY35983 Canola mitochondrion 66.6 56.24
AT3G55940.1 Thale cress mitochondrion 65.59 55.48
Bra007201.1-P Field mustard mitochondrion 60.32 54.58
PGSC0003DMT400078046 Potato cytosol 48.58 54.3
CDY70294 Canola mitochondrion 59.72 54.03
CDX72188 Canola mitochondrion 62.75 53.26
CDY27254 Canola mitochondrion 62.75 53.26
PGSC0003DMT400049368 Potato cytosol 63.97 53.02
PGSC0003DMT400016940 Potato cytosol, mitochondrion 60.73 50.76
HORVU1Hr1G014570.19 Barley mitochondrion 57.89 49.06
TraesCS1A01G069300.1 Wheat mitochondrion 57.89 48.89
TraesCS1D01G071800.3 Wheat mitochondrion 57.89 48.31
HORVU1Hr1G014580.9 Barley mitochondrion 58.1 47.05
OQU77319 Sorghum mitochondrion 57.09 46.84
Os05t0127200-01 Rice plasma membrane 56.68 46.82
Zm00001d047447_P002 Maize extracellular 56.07 41.65
PGSC0003DMT400031174 Potato cytosol, mitochondrion 61.34 34.28
Protein Annotations
KEGG:00562+3.1.4.11KEGG:04070+3.1.4.11Gene3D:2.60.40.150Gene3D:3.20.20.190MapMan:5.7.2.3.2InterPro:C2_dom
InterPro:C2_domain_sfProteinID:CAA63893ProteinID:CAA63893.1ncoils:CoilGO:GO:0003674GO:GO:0003824
GO:GO:0004435GO:GO:0004871GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0006629
GO:GO:0007154GO:GO:0007165GO:GO:0008081GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0016042GO:GO:0016787GO:GO:0035556InterPro:IPR000008InterPro:IPR000909
InterPro:IPR001711InterPro:IPR017946InterPro:IPR035892UniProt:M1A8D1PFAM:PF00168PFAM:PF00387
PFAM:PF00388EnsemblPlantsGene:PGSC0003DMG400006622PGSC:PGSC0003DMG400006622EnsemblPlants:PGSC0003DMT400016945InterPro:PI-PLC_famInterPro:PLC-like_Pdiesterase_TIM-brl
InterPro:PLipase_C_PInositol-sp_X_domInterPro:PLipase_C_Pinositol-sp_YPRINTS:PR00390PFscan:PS50004PFscan:PS50007PFscan:PS50008
PANTHER:PTHR10336PANTHER:PTHR10336:SF92SMART:SM00148SMART:SM00149SMART:SM00239SUPFAM:SSF49562
SUPFAM:SSF51695SignalP:SignalP-noTMUniParc:UPI0002952ED8EMBL:X94183SEG:seg:
Description
Phosphoinositide-specific phospholipase C [Source:PGSC_GENE;Acc:PGSC0003DMG400006622]
Coordinates
chr6:+:26388101..26395014
Molecular Weight (calculated)
56130.9 Da
IEP (calculated)
4.893
GRAVY (calculated)
-0.470
Length
494 amino acids
Sequence
(BLAST)
001: MASSSVSFLM LILLSILNLG YVNPPLDPKL GIHHDMNAPL SHYYIYTGHN SYLTGNQLSS DCSDVPIIQA LQRSVRVIEL DIWPNSDKDD IEVLHGRTLT
101: APVALIKCLR SIKEHAFSAS EYPVVITLED HLMPDLQEKV AEMITQTFGD MLFSPSESLK ELPSPESLRK RVMISTKPPK EYLQSKEVKE KDDTKKEAEQ
201: DDVDEEEDED EDEDDEEDPK SEKKAASEYK RLIAIHAGKG KGGLSDWLRV DLNKVRRLSL SEPELEKAVD THSKEIIRFT QQNLLRIYPK GIRVDSSNYD
301: PFVGWMHGAQ MVAFNMQGYG RSLWLMHGMF RANGGCGYVK KPDLLLKAGP NNEVFDPTAN LPVKTTLKVT VYMGDGWDKD FDQTHFDTYS PPDFYAKLGI
401: AGVPADEVKK RTKTMDDNWI PSWDEQFEFP LTVPELALLR IKVLDYNLSD KDEFAGQTCL PVAELRQGIR AVPLYDRKGE KYSSVKLLMR FEFI
Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)
001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE
Arabidopsis Description
PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.