CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91265
OQU91413

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G55940.1	EER91265	AT4G26630.1	25387881
AT3G55940.1	OQU91413	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0127200-01	Rice	plasma membrane	81.23	81.77
Zm00001d047447_P002	Maize	extracellular	87.54	79.25
TraesCS1A01G069300.1	Wheat	mitochondrion	73.59	75.73
TraesCS1D01G071800.3	Wheat	mitochondrion	73.75	75.0
HORVU1Hr1G014570.19	Barley	mitochondrion	71.59	73.93
HORVU1Hr1G014580.9	Barley	mitochondrion	74.09	73.11
GSMUA_Achr10P...	Banana	mitochondrion	50.33	58.72
CDY01144	Canola	cytosol	45.51	58.3
PGSC0003DMT400016945	Potato	endoplasmic reticulum	46.84	57.09
Bra007201.1-P	Field mustard	mitochondrion	51.16	56.41
CDY70294	Canola	mitochondrion	50.83	56.04
KRH31148	Soybean	mitochondrion	54.98	55.91
Solyc05g052760.2.1	Tomato	plastid	53.99	55.75
PGSC0003DMT400069760	Potato	mitochondrion	53.99	55.56
KRG97732	Soybean	mitochondrion	54.49	55.41
VIT_13s0067g00900.t01	Wine grape	mitochondrion	54.49	55.31
Bra040049.1-P	Field mustard	cytosol	49.67	55.17
Bra029697.1-P	Field mustard	mitochondrion	51.49	54.96
CDY27998	Canola	cytosol	49.34	54.4
CDY27254	Canola	mitochondrion	52.49	54.3
CDY22153	Canola	mitochondrion	52.33	54.22
CDY47356	Canola	mitochondrion	50.5	53.9
KRH73190	Soybean	endoplasmic reticulum	53.65	53.83
CDX72188	Canola	mitochondrion	51.99	53.78
Bra032722.1-P	Field mustard	mitochondrion	50.17	53.64
CDY35983	Canola	mitochondrion	51.99	53.5
VIT_08s0007g02280.t01	Wine grape	cytosol, mitochondrion	55.15	53.46
AT3G55940.1	Thale cress	mitochondrion	51.83	53.42
VIT_08s0105g00300.t01	Wine grape	cytosol	48.84	53.36
AT3G08510.1	Thale cress	mitochondrion	51.49	53.36
KRH14945	Soybean	mitochondrion	53.16	53.33
Solyc06g051620.2.1	Tomato	cytosol, mitochondrion	49.83	53.1
PGSC0003DMT400078046	Potato	cytosol	38.54	52.49
PGSC0003DMT400049368	Potato	cytosol	51.16	51.68
EER99967	Sorghum	cytosol, mitochondrion	51.99	51.57
EES16479	Sorghum	cytosol, mitochondrion	51.66	50.98
Solyc10g076710.1.1	Tomato	cytosol	50.83	50.92
AT5G58670.1	Thale cress	cytosol	46.68	50.09
KRH72676	Soybean	cytosol, mitochondrion	31.23	50.0
CDY71238	Canola	cytosol	33.39	49.63
VIT_06s0004g06670.t01	Wine grape	cytosol	47.67	49.4
CDY52120	Canola	cytosol, mitochondrion	45.68	49.2
CDX80344	Canola	cytosol	45.68	49.2
OQU82674	Sorghum	cytosol, mitochondrion	50.0	49.18
CDY65008	Canola	cytosol	28.41	49.0
Solyc06g082000.2.1	Tomato	cytosol	46.01	48.94
Bra002627.1-P	Field mustard	cytosol	42.86	48.41
CDY02827	Canola	cytosol	42.36	48.39
Bra020361.1-P	Field mustard	cytosol	42.36	48.3
CDY32694	Canola	cytosol	42.19	48.2
KRH17039	Soybean	cytosol, mitochondrion	45.68	47.74
CDY70829	Canola	cytosol	39.7	47.61
OQU92774	Sorghum	cytosol	38.21	47.52
AT4G38530.1	Thale cress	cytosol	44.19	47.16
Bra033567.1-P	Field mustard	cytosol	40.7	46.23
Bra006749.1-P	Field mustard	cytosol, mitochondrion	45.85	45.17
CDX71156	Canola	cytosol, mitochondrion	45.68	45.01
CDY61028	Canola	cytosol, mitochondrion	45.68	45.01
CDY68902	Canola	cytosol	21.1	43.79
OQU82766	Sorghum	cytosol	43.69	38.73

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:1.10.238.10	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2
EntrezGene:8071261	UniProt:A0A1Z5R1B1	InterPro:C2_dom	InterPro:C2_domain_sf	ncoils:Coil	InterPro:EF-hand-dom_pair
GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008081	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016042	GO:GO:0016787	GO:GO:0035556
InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892	EnsemblPlants:OQU77319
ProteinID:OQU77319	ProteinID:OQU77319.1	PFAM:PF00168	PFAM:PF00387	PFAM:PF00388	PFAM:PF09279
InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLC_EF-hand-like	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390
PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF104	SMART:SM00148
SMART:SM00149	SMART:SM00239	EnsemblPlantsGene:SORBI_3009G027800	SUPFAM:SSF47473	SUPFAM:SSF49562	SUPFAM:SSF51695
UniParc:UPI0001A88DF9	RefSeq:XP_002439212.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:2480156..2487514

Molecular Weight (calculated)

67510.3 Da

IEP (calculated)

6.285

GRAVY (calculated)

-0.446

Length

602 amino acids

Sequence
(BLAST)

001: MTTTYRVCCF LRRFRAASNE PSEAVRDVFQ AYADGGGVVG EEALRRLLRE VQGETEAGAD AAAKEVMAFA AEQRLLKKGG LTAEGFHRWL FSDANAALDP
101: RRGVYQDMGL PLSHYFIYTG HNSYLTGNQL SSGCSERPIV KALHDGVRVI ELDLWPNAGK DDVEVLHGRT WTSPVELIKC LEAIKEHAFV TSPFPVILTL
201: EDHLTPDLQA NVAKMLKETF GEMLYVSESE KMAEFPSPDE LKGKIIISTK APKEYLQTKS GKEEAEEGVW GEEISDDKTT AHQMSEQFSG KYSAAAEEEA
301: AAGAEEEAAE AEAEKKARQG TDNEYRRLIA IQLTRRKHDM EQDLRVDPDK VTRLSLGEKA FEKAIVSHGD HIVRFTQRNL LRIFPRSTRI TSSNYNPLMG
401: WRYGVQMVAA NMQGHGRKLW LTQGMFRANG GCGYVKKPDI LMNSAAADDP AGGIGKLFDP TRADLPVKTR LKVTVYMGDG WRFDFRKTHF DRCSPPDFYV
501: RVGIAGVAAD MRMEQTRVVM DSWIPAWDHE FGEFPLAAPE LALLRVEVHE SDNHQKDDFG GQTCLPVWEL RPGIRSVRLA DHKGQPLRSV KLLMRFEFFS
601: SP

Best Arabidopsis Sequence Match ( AT3G08510.1 )
(BLAST)

001: MSKQTYKVCF CFRRRFRYTA SEAPREIKTI FEKYSENGVM TVDHLHRFLI DVQKQDKATR EDAQSIINSA SSLLHRNGLH LDAFFKYLFG DNNPPLALHK
101: VHHDMDAPIS HYFIFTGHNS YLTGNQLSSD CSEVPIIDAL KKGVRVIELD IWPNSNKDDI DVLHGMTLTT PVGLIKCLKA IRAHAFDVSD YPVVVTLEDH
201: LTPDLQSKVA EMVTEIFGEI LFTPPVGESL KEFPSPNSLK RRIIISTKPP KEYKEGKDVE VVQKGKDLGD EEVWGREVPS FIQRNKSEAK DDLDGNDDDD
301: DDDDEDKSKI NAPPQYKHLI AIHAGKPKGG ITECLKVDPD KVRRLSLSEE QLEKAAEKYA KQIVRFTQHN LLRIYPKGTR VTSSNYNPLV GWSHGAQMVA
401: FNMQGYGRSL WLMQGMFRAN GGCGYIKKPD LLLKSGSDSD IFDPKATLPV KTTLRVTVYM GEGWYFDFRH THFDQYSPPD FYTRVGIAGV PGDTVMKKTK
501: TLEDNWIPAW DEVFEFPLTV PELALLRLEV HEYDMSEKDD FGGQTCLPVW ELSEGIRAFP LHSRKGEKYK SVKLLVKVEF V

Arabidopsis Description

PLC2Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:A0A178VDK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.