Factsheet for TraesCS1A01G069300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G55940.1	TraesCS4A01G137900.1	AT4G26630.1	25387881
AT3G55940.1	TraesCS4B01G148100.1	AT4G26630.1	25387881
AT3G55940.1	TraesCS4D01G153300.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G071800.3	Wheat	mitochondrion	98.29	97.13
HORVU1Hr1G014570.19	Barley	mitochondrion	92.99	93.31
HORVU1Hr1G014580.9	Barley	mitochondrion	96.41	92.46
Os05t0127200-01	Rice	plasma membrane	78.46	76.76
OQU77319	Sorghum	mitochondrion	75.73	73.59
Zm00001d047447_P002	Maize	extracellular	75.21	66.17
GSMUA_Achr10P...	Banana	mitochondrion	51.11	57.95
PGSC0003DMT400016945	Potato	endoplasmic reticulum	48.89	57.89
CDY01144	Canola	cytosol	45.98	57.23
Bra007201.1-P	Field mustard	mitochondrion	52.99	56.78
KRH31148	Soybean	mitochondrion	57.44	56.76
CDY70294	Canola	mitochondrion	52.65	56.41
KRG97732	Soybean	mitochondrion	56.92	56.25
VIT_13s0067g00900.t01	Wine grape	mitochondrion	56.75	55.99
Solyc05g052760.2.1	Tomato	plastid	55.38	55.57
PGSC0003DMT400069760	Potato	mitochondrion	55.21	55.21
Bra029697.1-P	Field mustard	mitochondrion	52.99	54.96
Bra040049.1-P	Field mustard	cytosol	50.77	54.8
KRH73190	Soybean	endoplasmic reticulum	56.07	54.67
CDY27254	Canola	mitochondrion	54.19	54.47
KRH14945	Soybean	mitochondrion	55.73	54.33
CDX72188	Canola	mitochondrion	54.02	54.3
CDY27998	Canola	cytosol	50.43	54.03
Solyc06g051620.2.1	Tomato	cytosol, mitochondrion	52.14	53.98
CDY22153	Canola	mitochondrion	53.5	53.87
AT3G08510.1	Thale cress	mitochondrion	53.33	53.7
CDY35983	Canola	mitochondrion	53.33	53.33
CDY47356	Canola	mitochondrion	51.28	53.19
Bra032722.1-P	Field mustard	mitochondrion	51.11	53.11
AT3G55940.1	Thale cress	mitochondrion	52.99	53.08
VIT_08s0007g02280.t01	Wine grape	cytosol, mitochondrion	56.24	52.98
PGSC0003DMT400049368	Potato	cytosol	53.85	52.85
VIT_08s0105g00300.t01	Wine grape	cytosol	49.57	52.63
PGSC0003DMT400078046	Potato	cytosol	39.66	52.49
TraesCS2A01G084000.2	Wheat	cytosol, mitochondrion	54.02	51.89
AT5G58670.1	Thale cress	cytosol	49.57	51.69
Solyc10g076710.1.1	Tomato	cytosol	52.99	51.58
CDY71238	Canola	cytosol	35.38	51.11
KRH72676	Soybean	cytosol, mitochondrion	32.82	51.06
CDX80344	Canola	cytosol	48.55	50.8
CDY52120	Canola	cytosol, mitochondrion	48.55	50.8
Bra020361.1-P	Field mustard	cytosol	45.64	50.57
Bra002627.1-P	Field mustard	cytosol	45.98	50.47
CDY32694	Canola	cytosol	45.3	50.28
TraesCS4A01G109000.2	Wheat	cytosol	54.19	50.08
CDY02827	Canola	cytosol	44.96	49.91
VIT_06s0004g06670.t01	Wine grape	cytosol	49.4	49.74
Solyc06g082000.2.1	Tomato	cytosol	48.03	49.65
KRH17039	Soybean	cytosol, mitochondrion	48.21	48.96
CDY65008	Canola	cytosol	29.06	48.71
AT4G38530.1	Thale cress	cytosol	46.15	47.87
CDY70829	Canola	cytosol	41.03	47.81
Bra033567.1-P	Field mustard	cytosol	42.22	46.6
Bra006749.1-P	Field mustard	cytosol, mitochondrion	48.21	46.15
CDX71156	Canola	cytosol, mitochondrion	48.03	45.99
CDY61028	Canola	cytosol, mitochondrion	48.03	45.99
CDY68902	Canola	cytosol	22.22	44.83

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:1.10.238.10	Gene3D:2.60.40.150	MapMan:5.7.2.3.2	InterPro:C2_dom
InterPro:C2_domain_sf	InterPro:EF-hand-dom_pair	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0006629
GO:GO:0007154	GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0035556	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946
InterPro:IPR035892	PFAM:PF00168	PFAM:PF00387	PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl
InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008
PANTHER:PTHR10336	PANTHER:PTHR10336:SF104	SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473
SUPFAM:SSF49562	SUPFAM:SSF51695	EnsemblPlantsGene:TraesCS1A01G069300	EnsemblPlants:TraesCS1A01G069300.1	TIGR:cd00275	SEG:seg

Description

No Description!

Coordinates

chr1A:+:51700153..51707144

Molecular Weight (calculated)

66014.7 Da

IEP (calculated)

6.471

GRAVY (calculated)

-0.462

Length

585 amino acids

Sequence
(BLAST)

001: MTTYRVCCFL RRFRPASNEP SEAIGDVFEA YAGADGGSGA LGEEALRRFL REVQGEAGDD DVEAAAREVL AFAAEHRLLK KGGGLTVEGF HRWLCSDANA
101: ALNPRRGVHD DMGLPLSHYF IYTGHNSYLT GNQLSSGCSE APIAKALRDG VRVIELDLWP NAAKDDVEVL HGRTWTSPVD LMKCLETVKE HAFVSSPYPV
201: ILTLEDHLTP HLQAKVAKMI KETFGDLLHL SESEAMPVFP SPEDLRGKII ISTKPPKEYL ETKSSKEEAQ NGSAEESVWG DEIPDNKAQV ATARQVSEKD
301: NYRYVEEDEE MEKKVQLGVN GEYKSLISIS LTRRKHDMDQ DLKVDPEKVS RMSLGEAAYE KATITHGSEI IKFTQRNLLR IFPKTTRITS SNYNPLMGWR
401: YGAQMVAANM QGHGRKLWLT QGMFRANGGC GYVKKPDFLM NTDKMFDPRS KLPVKTRLKV TVYMGDGWRF DFRKTHFDKC SPPDFYARVG IAGVVADTMM
501: KETKVIMDNW IPTWDHEFEF PLSVPELALL RVEVHESDNH QKDDFAGQTC LPVWELRSGI RSVRLYARDG EALRSVKLLM RFEFS

Best Arabidopsis Sequence Match ( AT3G08510.1 )
(BLAST)

001: MSKQTYKVCF CFRRRFRYTA SEAPREIKTI FEKYSENGVM TVDHLHRFLI DVQKQDKATR EDAQSIINSA SSLLHRNGLH LDAFFKYLFG DNNPPLALHK
101: VHHDMDAPIS HYFIFTGHNS YLTGNQLSSD CSEVPIIDAL KKGVRVIELD IWPNSNKDDI DVLHGMTLTT PVGLIKCLKA IRAHAFDVSD YPVVVTLEDH
201: LTPDLQSKVA EMVTEIFGEI LFTPPVGESL KEFPSPNSLK RRIIISTKPP KEYKEGKDVE VVQKGKDLGD EEVWGREVPS FIQRNKSEAK DDLDGNDDDD
301: DDDDEDKSKI NAPPQYKHLI AIHAGKPKGG ITECLKVDPD KVRRLSLSEE QLEKAAEKYA KQIVRFTQHN LLRIYPKGTR VTSSNYNPLV GWSHGAQMVA
401: FNMQGYGRSL WLMQGMFRAN GGCGYIKKPD LLLKSGSDSD IFDPKATLPV KTTLRVTVYM GEGWYFDFRH THFDQYSPPD FYTRVGIAGV PGDTVMKKTK
501: TLEDNWIPAW DEVFEFPLTV PELALLRLEV HEYDMSEKDD FGGQTCLPVW ELSEGIRAFP LHSRKGEKYK SVKLLVKVEF V

Arabidopsis Description

PLC2Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:A0A178VDK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.