Factsheet for VIT_13s0067g00900.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_19s0015g00430.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G55940.1	VIT_19s0015g00430.t01	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g052760.2.1	Tomato	plastid	75.89	77.19
PGSC0003DMT400069760	Potato	mitochondrion	75.04	76.07
KRH31148	Soybean	mitochondrion	75.21	75.34
KRH73190	Soybean	endoplasmic reticulum	76.22	75.33
KRG97732	Soybean	mitochondrion	75.04	75.17
KRH14945	Soybean	mitochondrion	75.89	75.0
Bra029697.1-P	Field mustard	mitochondrion	70.66	74.29
PGSC0003DMT400016945	Potato	endoplasmic reticulum	61.55	73.89
AT3G08510.1	Thale cress	mitochondrion	71.84	73.32
CDY35983	Canola	mitochondrion	71.67	72.65
Bra040049.1-P	Field mustard	cytosol	66.1	72.32
CDY22153	Canola	mitochondrion	70.83	72.29
CDY27998	Canola	cytosol	66.1	71.79
VIT_08s0007g02280.t01	Wine grape	cytosol, mitochondrion	74.87	71.5
CDY01144	Canola	cytosol	56.16	70.85
Solyc06g051620.2.1	Tomato	cytosol, mitochondrion	67.12	70.44
Bra007201.1-P	Field mustard	mitochondrion	64.59	70.15
AT3G55940.1	Thale cress	mitochondrion	68.8	69.86
CDY70294	Canola	mitochondrion	64.08	69.6
VIT_08s0105g00300.t01	Wine grape	cytosol	64.42	69.33
Bra032722.1-P	Field mustard	mitochondrion	65.77	69.27
CDY47356	Canola	mitochondrion	65.77	69.15
VIT_06s0004g06650.t01	Wine grape	cytosol	56.49	68.51
CDY27254	Canola	mitochondrion	66.44	67.7
CDX72188	Canola	mitochondrion	65.94	67.18
VIT_06s0004g06660.t01	Wine grape	cytosol, mitochondrion	66.61	67.18
GSMUA_Achr10P...	Banana	mitochondrion	54.81	62.98
VIT_13s0067g00890.t01	Wine grape	cytosol	62.56	62.67
VIT_06s0004g06670.t01	Wine grape	cytosol	61.05	62.31
TraesCS1A01G069300.1	Wheat	mitochondrion	55.99	56.75
TraesCS1D01G071800.3	Wheat	mitochondrion	56.49	56.59
HORVU1Hr1G014570.19	Barley	mitochondrion	55.48	56.43
Os05t0127200-01	Rice	plasma membrane	55.48	55.02
HORVU1Hr1G014580.9	Barley	mitochondrion	56.32	54.75
OQU77319	Sorghum	mitochondrion	55.31	54.49
Zm00001d047447_P002	Maize	extracellular	54.3	48.42

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:1.10.238.10	EntrezGene:100241574	wikigene:100241574	Gene3D:2.60.40.150
Gene3D:3.20.20.190	MapMan:5.7.2.3.2	UniProt:A5C0R5	EMBL:AM478090	InterPro:C2_dom	InterPro:C2_domain_sf
ProteinID:CAN64084	ProteinID:CAN64084.1	ProteinID:CCB49863	ProteinID:CCB49863.1	InterPro:EF-hand-dom_pair	EMBL:FN595514
GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008081	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016042	GO:GO:0016787	GO:GO:0035556
InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892	EntrezGene:LOC100241574
wikigene:LOC100241574	PFAM:PF00168	PFAM:PF00387	PFAM:PF00388	PFAM:PF09279	InterPro:PI-PLC_fam
InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLC_EF-hand-like	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004
PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF92	SMART:SM00148	SMART:SM00149
SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562	SUPFAM:SSF51695	TIGR:TC55247	UniParc:UPI000152231B
ArrayExpress:VIT_13s0067g00900	EnsemblPlantsGene:VIT_13s0067g00900	EnsemblPlants:VIT_13s0067g00900.t01	unigene:Vvi.17034	unigene:Vvi.5209	RefSeq:XP_002269949
RefSeq:XP_002269949.1	RefSeq:XP_002270230	RefSeq:XP_002270230.1	RefSeq:XP_003633437	RefSeq:XP_003633437.1	SEG:seg

Description

Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:A5C0R5]

Coordinates

chr13:+:507039..514125

Molecular Weight (calculated)

67771.7 Da

IEP (calculated)

6.077

GRAVY (calculated)

-0.468

Length

593 amino acids

Sequence
(BLAST)

001: MSKQTYRVCF CFRRRFRLTV SEAPQEIKEL FDRYSENGMM SIDHLQRFLI EVQQEEKATV EDAQAILDSL HEFKHLNIFH RKALNLEAFF KYLFGDINPP
101: LSTALGVHHD MTAPLSHYFV YTGHNSYLTG NQLSSDCSDV PIIHALQRGV RVIELDIWPN STKDNVDVLH GRTLTTPVEL IKCLKSIKEH AFSASEYPVV
201: ITLEDHLTPD LQAKVAEMVT QTFGDILFTP GPECLNEFPS PESLKKRIII STKPPKEYLE AKDVKEKEND SQKGKESADE EAWGKEVSNL KPSTVAVDES
301: NLEEEENIDE EDLDEGDPKS QQNAAPEYKR LIAIHAGKVK GGLTEWLRVD PDKVRRLSLS EQELEKAVLT HGKEIVRFTQ RNLLRVYPKG IRFDSSNYNP
401: VIGWMHGAQM VAFNMQGYGR SLWIMHGMFK ANGGCGYVKK PDFLLNNGSH DGVFDPKAKL PVKTTLKVTV YMGEGWYFDF RHTHFDAYSP PDFYARVGIA
501: GVPADTIMKK TKTLEDNWTP NWDEHFEFPL TVPELALLRV EVHEYDMSEK DDFGGQTCLP VSELRRGIRA VPLFSRKGDK YPSVKLLMRF EFV

Best Arabidopsis Sequence Match ( AT3G08510.1 )
(BLAST)

001: MSKQTYKVCF CFRRRFRYTA SEAPREIKTI FEKYSENGVM TVDHLHRFLI DVQKQDKATR EDAQSIINSA SSLLHRNGLH LDAFFKYLFG DNNPPLALHK
101: VHHDMDAPIS HYFIFTGHNS YLTGNQLSSD CSEVPIIDAL KKGVRVIELD IWPNSNKDDI DVLHGMTLTT PVGLIKCLKA IRAHAFDVSD YPVVVTLEDH
201: LTPDLQSKVA EMVTEIFGEI LFTPPVGESL KEFPSPNSLK RRIIISTKPP KEYKEGKDVE VVQKGKDLGD EEVWGREVPS FIQRNKSEAK DDLDGNDDDD
301: DDDDEDKSKI NAPPQYKHLI AIHAGKPKGG ITECLKVDPD KVRRLSLSEE QLEKAAEKYA KQIVRFTQHN LLRIYPKGTR VTSSNYNPLV GWSHGAQMVA
401: FNMQGYGRSL WLMQGMFRAN GGCGYIKKPD LLLKSGSDSD IFDPKATLPV KTTLRVTVYM GEGWYFDFRH THFDQYSPPD FYTRVGIAGV PGDTVMKKTK
501: TLEDNWIPAW DEVFEFPLTV PELALLRLEV HEYDMSEKDD FGGQTCLPVW ELSEGIRAFP LHSRKGEKYK SVKLLVKVEF V

Arabidopsis Description

PLC2Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:A0A178VDK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.