Factsheet for VIT_06s0004g06660.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g007120.2.1	Tomato	nucleus	77.55	77.68
VIT_06s0004g06650.t01	Wine grape	cytosol	64.29	77.3
GSMUA_Achr5P28270_001	Banana	plasma membrane	69.22	68.52
GSMUA_Achr2P18980_001	Banana	mitochondrion	67.35	67.58
GSMUA_Achr5P08470_001	Banana	mitochondrion	68.03	67.57
VIT_13s0067g00900.t01	Wine grape	mitochondrion	67.18	66.61
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	67.01	66.44
GSMUA_AchrUn_...	Banana	mitochondrion	64.29	66.32
VIT_13s0067g00890.t01	Wine grape	cytosol	66.16	65.71
HORVU0Hr1G012510.3	Barley	endoplasmic reticulum	46.09	64.07
Zm00001d028746_P001	Maize	plastid	62.76	62.65
EER99967	Sorghum	cytosol, mitochondrion	64.63	62.6
VIT_08s0105g00300.t01	Wine grape	cytosol	58.5	62.43
HORVU2Hr1G013730.2	Barley	cytosol	59.18	62.25
TraesCS2D01G082000.1	Wheat	cytosol, mitochondrion	64.12	62.11
Zm00001d007229_P001	Maize	cytosol, mitochondrion	63.78	61.88
Os07t0694000-01	Rice	plasma membrane	62.93	61.87
TraesCS2B01G098500.1	Wheat	cytosol, mitochondrion	63.61	61.72
TraesCS2A01G084000.2	Wheat	cytosol, mitochondrion	63.61	61.41
TraesCS5D01G160300.1	Wheat	mitochondrion	61.39	61.29
Os12t0562400-00	Rice	plasma membrane	60.71	60.51
Zm00001d014903_P002	Maize	mitochondrion	60.03	60.24
Zm00001d014906_P003	Maize	plasma membrane	60.03	60.24
VIT_08s0007g02280.t01	Wine grape	cytosol, mitochondrion	62.76	59.42
Os03t0289300-00	Rice	plasma membrane	64.29	59.15
TraesCS4B01G195200.2	Wheat	cytosol	63.27	58.77
TraesCS4A01G109000.2	Wheat	cytosol	63.1	58.61
TraesCS4D01G195800.1	Wheat	cytosol	63.1	58.61
EES16479	Sorghum	cytosol, mitochondrion	60.37	58.2
OQU82674	Sorghum	cytosol, mitochondrion	60.37	58.01
HORVU4Hr1G056550.2	Barley	cytosol	61.56	56.83
OQU92774	Sorghum	cytosol	45.75	55.58
VIT_06s0004g06670.t01	Wine grape	cytosol	54.59	55.25
OQU82766	Sorghum	cytosol	51.36	44.48

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:1.10.238.10	EntrezGene:100255373	wikigene:100255373	Gene3D:2.60.40.150
Gene3D:3.20.20.190	MapMan:5.7.2.3.2	InterPro:C2_dom	InterPro:C2_domain_sf	ProteinID:CCB43475	ProteinID:CCB43475.1
InterPro:EF-hand-dom_pair	UniProt:F6GUR2	EMBL:FN594951	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435
GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154
GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016042	GO:GO:0016787	GO:GO:0035556	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711
InterPro:IPR017946	InterPro:IPR035892	EntrezGene:LOC100255373	wikigene:LOC100255373	PFAM:PF00168	PFAM:PF00387
PFAM:PF00388	PFAM:PF09279	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLC_EF-hand-like	InterPro:PLipase_C_PInositol-sp_X_dom
InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336
PANTHER:PTHR10336:SF101	SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562
SUPFAM:SSF51695	UniParc:UPI0001983650	ArrayExpress:VIT_06s0004g06660	EnsemblPlantsGene:VIT_06s0004g06660	EnsemblPlants:VIT_06s0004g06660.t01	RefSeq:XP_002278527
RefSeq:XP_002278527.1	RefSeq:XP_003632176	RefSeq:XP_003632176.1	SEG:seg	:	:

Description

Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:F6GUR2]

Coordinates

chr6:+:7370478..7375367

Molecular Weight (calculated)

66981.8 Da

IEP (calculated)

7.005

GRAVY (calculated)

-0.530

Length

588 amino acids

Sequence
(BLAST)

001: MGSYRVCMCF RRKFRVVEAE PPEDVKEAFK KYAEGGTHMT AEQLRRFLLE SQSDGSVTLS DAERIVEQVL QKRHHIAKFT RHNLTLDDFH HFLFSTDLNA
101: PIGSQVHQDM NAPLSHYFIY TGHNSYLTGN QLSSDCSDVP VIKALKRGVR VIELDIWPDS TKADVHVLHG RTLTTPVELI KCLRSIKEHA FSASPYPVII
201: TLEDHLTPDL QAKVAQMVTQ TFQDILFYPK SECLQEFPSP EELKYRIIIS TKPPKEYLEA KGSEDKENNI QKGKDSDDDV WGEEPSNITA DHENNDKSDS
301: EGSEVDEDGE ENNDCRPIGA PAYKHLISIH AGKPKGGFKD ALKVEPNKVR RLSLSEQALE KATASHGTDV VRFTQKNFLR IYPKGTRFNS SNYKPLIGWT
401: HGAQMVAFNM QGYGRYLWLM HGMFRANGGC GYVKKPDFLM NVGPNNQVFN PRVKLPVKKT LKVKVYMGDG WHLDFKQTHF DLYSPPDFYA RVGIAGVPGD
501: EVMKKTKTKE DKWTPVWNEE FQFPLTVPEL ALLRVEVHEY DLSEKDDFAG QTCLPISELK PGIRAVPLFN RKGEMFCSAR LLMRFEFV

Best Arabidopsis Sequence Match ( AT5G58700.3 )
(BLAST)

001: MEGKKEMGSY KFCLIFTRKF RMTESGPVED VRDLFEKYTE GDAHMSPEQL QKLMTEEGGE GETSLEEAER IVDEVLRRKH HIAKFTRRNL TLDDFNYYLF
101: STDLNPPIAD QVHQNMDAPL SHYFIFTGHN SYLTGNQLSS NCSELPIADA LRRGVRVVEL DLWPRGTDDV CVKHGRTLTK EVKLGKCLES IKANAFAISK
201: YPVIITLEDH LTPKLQFKVA KMITQTFGDM LYYHDSQGCQ EFPSPEELKE KILISTKPPK EYLEANDTKE KDNGEKGKDS DEDVWGKEPE DLISTQSDLD
301: KVTSSVNDLN QDDEERGSCE SDTSCQLQAP EYKRLIAIHA GKPKGGLRMA LKVDPNKIRR LSLSEQLLEK AVASYGADVI RFTQKNFLRI YPKGTRFNSS
401: NYKPQIGWMS GAQMIAFNMQ GYGRALWLME GMFRANGGCG YVKKPDFLMD ASPNGQDFYP KDNSSPKKTL KVKVCMGDGW LLDFKKTHFD SYSPPDFFVR
501: VGIAGAPVDE VMEKTKIEYD TWTPIWNKEF TFPLAVPELA LLRVEVHEHD VNEKDDFGGQ TCLPVSEIRQ GIRAVPLFNR KGVKYSSTRL LMRFEFV

Arabidopsis Description

PLC4Phosphoinositide phospholipase C 4 [Source:UniProtKB/Swiss-Prot;Acc:Q944C1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.