Factsheet for GSMUA_Achr5P08470_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
plasma membrane 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	mitochondrion	76.35	79.3
GSMUA_Achr5P28270_001	Banana	plasma membrane	70.78	70.54
HORVU0Hr1G012510.3	Barley	endoplasmic reticulum	49.66	69.5
GSMUA_Achr2P18980_001	Banana	mitochondrion	68.58	69.28
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	68.58	68.47
VIT_06s0004g06660.t01	Wine grape	cytosol, mitochondrion	67.57	68.03
Zm00001d014906_P003	Maize	plasma membrane	66.89	67.58
TraesCS5D01G160300.1	Wheat	mitochondrion	67.23	67.57
Solyc06g007120.2.1	Tomato	nucleus	66.89	67.46
Zm00001d014903_P002	Maize	mitochondrion	66.55	67.24
VIT_06s0004g06650.t01	Wine grape	cytosol	55.07	66.67
Os12t0562400-00	Rice	plasma membrane	65.88	66.1
EES16479	Sorghum	cytosol, mitochondrion	67.23	65.25
OQU82674	Sorghum	cytosol, mitochondrion	67.4	65.2
CDY71544	Canola	cytosol	51.86	63.04
GSMUA_Achr10P...	Banana	mitochondrion	53.04	60.85
CDY52122	Canola	cytosol, mitochondrion	60.3	60.61
Bra002625.1-P	Field mustard	mitochondrion	60.3	60.61
CDX80341	Canola	mitochondrion	60.3	60.51
CDY32691	Canola	cytosol	60.64	60.44
Bra020359.1-P	Field mustard	cytosol, mitochondrion	60.47	60.27
AT5G58700.3	Thale cress	cytosol	60.47	59.97
AT5G58690.1	Thale cress	cytosol	55.41	56.75
Bra002626.1-P	Field mustard	cytosol	54.22	55.34
CDY52121	Canola	cytosol	54.39	54.67
CDX80342	Canola	cytosol	54.22	54.5
Bra005237.1-P	Field mustard	cytosol	12.84	51.01
CDX75008	Canola	cytosol	13.85	47.4
CDY33201	Canola	cytosol	9.97	46.09
AT3G47220.1	Thale cress	cytosol	38.51	42.94
AT3G47290.2	Thale cress	cytosol	37.84	39.09

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	InterPro:C2_dom
InterPro:C2_domain_sf	InterPro:EF-hand-dom_pair	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0004871
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165
GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016042
GO:GO:0016787	GO:GO:0035556	EnsemblPlantsGene:GSMUA_Achr5G08470_001	EnsemblPlants:GSMUA_Achr5P08470_001	EnsemblPlants:GSMUA_Achr5T08470_001	InterPro:IPR000008
InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892	UniProt:M0SWS6	PFAM:PF00168
PFAM:PF00387	PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y
PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF101
SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562	SUPFAM:SSF51695
UniParc:UPI000295E1C6	SEG:seg	:	:	:	:

Description

Phosphoinositide phospholipase C 6 [Source:GMGC_GENE;Acc:GSMUA_Achr5G08470_001]

Coordinates

chr5:+:6159435..6164993

Molecular Weight (calculated)

67230.8 Da

IEP (calculated)

5.906

GRAVY (calculated)

-0.512

Length

592 amino acids

Sequence
(BLAST)

001: MGSYKYCMCF TRKFLWSAAQ PPADVREAFA AHAGGAAQMG ADQLQRFLAE AQGEAAATLA DAERIVELLR RRHHLPSVLA RPGITLDDFF HFLFSGDLNP
101: PVRSQVHQDM KLPLSHYYIY TGHNSYLTGN QLSSDCSDVP IIKALQRGVR VIELDMWPNS TKDNVHILHG RTLTSPVEMI RCLRSIKEFA FCASPYPVVI
201: TLEDHLTADL QAKVAQMVTR IFGDMLYYPE SDSLEEFPSP ESLMNRVIIS TKPPKEYLEA KNIRDKEDDS HESGKVSNDE ETWGNDTADL KALSTSNDKK
301: EDEQNGDEQD EEDSDDDDDD DDSAPEYRHI ITVHAGKPKG RMRDALKVDP HKVRRLSLSE QQLEKLAESH GPDIVRFTQK NILRVYPKGT RFNSSNYNPL
401: LGWMHGAQMV AFNMQGYGRS LWLMQGLFRA NGGCGFVRKP DFLMKVGPHG EVFDPEASLP VKITLKVKVY MGDGWRMDFS QTHFDAYSPP DFYTKVGIAG
501: VPADTKMKKT KIIEDNWTPV WEEEFSFPLT VPELALLRVE VHEYDMSDKD DFGGQTCLPV WELRPGIRAV PLHDRKGNKY KSVRLLMRFQ FV

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.