Factsheet for GSMUA_Achr5P28270_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 21334471

msms PMID: 21334471 doi

A Vertommen, AL Møller, JH Cordewener, R Swennen, B Panis, C Finnie, AH America, SC Carpentier

Laboratory of Tropical Crop Improvement, Department of Biosystems, K.U. Leuven, Kasteelpark Arenberg 13, PO box 2455, B-3001 Heverlee, Belgium.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P18980_001	Banana	mitochondrion	77.61	78.67
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	77.95	78.08
GSMUA_Achr5P08470_001	Banana	mitochondrion	70.54	70.78
VIT_06s0004g06660.t01	Wine grape	cytosol, mitochondrion	68.52	69.22
Solyc06g007120.2.1	Tomato	nucleus	67.85	68.65
EER99967	Sorghum	cytosol, mitochondrion	69.19	67.71
GSMUA_AchrUn_...	Banana	mitochondrion	63.97	66.67
TraesCS2D01G082000.1	Wheat	cytosol, mitochondrion	68.01	66.56
VIT_06s0004g06650.t01	Wine grape	cytosol	54.71	66.46
HORVU2Hr1G013730.2	Barley	cytosol	62.46	66.37
TraesCS2B01G098500.1	Wheat	cytosol, mitochondrion	67.68	66.34
Os07t0694000-01	Rice	plasma membrane	66.67	66.22
Zm00001d028746_P001	Maize	plastid	65.49	66.04
TraesCS2A01G084000.2	Wheat	cytosol, mitochondrion	67.51	65.85
Zm00001d007229_P001	Maize	cytosol, mitochondrion	66.83	65.51
CDY71544	Canola	cytosol	52.86	64.48
Os03t0289300-00	Rice	plasma membrane	67.68	62.91
TraesCS4A01G109000.2	Wheat	cytosol	67.0	62.88
TraesCS4D01G195800.1	Wheat	cytosol	66.83	62.72
TraesCS4B01G195200.2	Wheat	cytosol	66.83	62.72
Bra002625.1-P	Field mustard	mitochondrion	61.78	62.31
CDY52122	Canola	cytosol, mitochondrion	61.62	62.14
Bra020359.1-P	Field mustard	cytosol, mitochondrion	62.12	62.12
GSMUA_Achr10P...	Banana	mitochondrion	53.87	62.02
CDY32691	Canola	cytosol	61.95	61.95
CDX80341	Canola	mitochondrion	61.11	61.53
AT5G58700.3	Thale cress	cytosol	61.45	61.14
HORVU4Hr1G056550.2	Barley	cytosol	64.98	60.6
OQU92774	Sorghum	cytosol	47.81	58.68
AT5G58690.1	Thale cress	cytosol	55.56	57.09
Bra002626.1-P	Field mustard	cytosol	53.7	55.0
CDX80342	Canola	cytosol	54.04	54.5
CDY52121	Canola	cytosol	53.87	54.33
Bra005237.1-P	Field mustard	cytosol	13.3	53.02
CDX75008	Canola	cytosol	14.31	49.13
OQU82766	Sorghum	cytosol	54.04	47.28
CDY33201	Canola	cytosol	10.1	46.88
AT3G47220.1	Thale cress	cytosol	38.55	43.13
AT3G47290.2	Thale cress	cytosol	38.55	39.97

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:1.10.238.10	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2
InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:EF-hand-dom_pair	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435
GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154
GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016042	GO:GO:0016787	GO:GO:0035556	EnsemblPlantsGene:GSMUA_Achr5G28270_001	EnsemblPlants:GSMUA_Achr5P28270_001	EnsemblPlants:GSMUA_Achr5T28270_001
InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892	UniProt:M0T2F1
PFAM:PF00168	PFAM:PF00387	PFAM:PF00388	PFAM:PF09279	InterPro:PI-PLC_fam	InterPro:PI-PLC_plant
InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLC_EF-hand-like	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004
PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF109	SMART:SM00148	SMART:SM00149
SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562	SUPFAM:SSF51695	UniParc:UPI000294B644	SEG:seg

Description

Phosphoinositide phospholipase C 4 [Source:GMGC_GENE;Acc:GSMUA_Achr5G28270_001]

Coordinates

chr5:-:28547865..28552986

Molecular Weight (calculated)

67749.5 Da

IEP (calculated)

6.126

GRAVY (calculated)

-0.537

Length

594 amino acids

Sequence
(BLAST)

001: MGSYRCCICF TRKFRWSEAK PTEDVREAFA TYAEGGAHMT ADQLRQFLEE AQGEAGATAA DAERVMERVR QLRRPSHLAK LSKPPFTLDD FHHYLFSEEL
101: NPPLQPQVHH DMTAPLSHYY IYTGHNSYLT GNQLSSDCSD VPIIRALQRG VRVIELDIWP NSARDNINVL HGRTLTSPVE LIRCLKSIKE HAFSASPYPV
201: IITLEDHLTP DLQAKVAKMV METFGDMLYY PDSESHKEFP SPEALKKRII ISTKPPKEYL EAKSFKEKDC DTQKENDSNE EEAWGKEVSD IQTEFELANK
301: IAQDEEVQDE ELADDDDDQK ERQNAPPEYK CLITIRAGKP KGHMSEALNV DPEKVRRLSL SEQELVKAAA THGADLLRFT QKNLLRIYPK GTRFNSSNYN
401: PFIGWIHGAQ MVAFNMQGYG RSLWLMHGFY KANGGCGYIK KPDFLVKAGP NNEVFDPKAV LPVKKTLKVK IYMGDGWRMD FSQTHFDAYS PPDFYTRVGI
501: AGVPADTVMK KTKTIEDNWT PVWDEEFTFT LTVPELALLR IEVHEYDMSE KDDFGGQTCI PVSELRPGIR AVPLFDHKGN KFNSVKLLMR FVFV

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.