CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007229_P001	Maize	cytosol, mitochondrion	86.99	87.13
TraesCS2D01G082000.1	Wheat	cytosol, mitochondrion	80.72	80.72
TraesCS2B01G098500.1	Wheat	cytosol, mitochondrion	79.9	80.03
TraesCS2A01G084000.2	Wheat	cytosol, mitochondrion	80.23	79.97
Os07t0694000-01	Rice	plasma membrane	78.25	79.43
HORVU2Hr1G013730.2	Barley	cytosol	72.82	79.07
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	67.71	69.31
GSMUA_Achr5P28270_001	Banana	plasma membrane	67.71	69.19
GSMUA_Achr2P18980_001	Banana	mitochondrion	65.4	67.75
VIT_06s0004g06660.t01	Wine grape	cytosol, mitochondrion	62.6	64.63
OQU92774	Sorghum	cytosol	51.4	64.46
Solyc06g007120.2.1	Tomato	nucleus	61.94	64.05
VIT_06s0004g06650.t01	Wine grape	cytosol	50.58	62.78
CDY71544	Canola	cytosol	50.08	62.42
EES16479	Sorghum	cytosol, mitochondrion	59.31	59.02
OQU82674	Sorghum	cytosol, mitochondrion	58.81	58.33
Bra002625.1-P	Field mustard	mitochondrion	56.51	58.23
CDY52122	Canola	cytosol, mitochondrion	56.34	58.06
AT5G58700.3	Thale cress	cytosol	56.84	57.79
CDX80341	Canola	mitochondrion	56.01	57.63
CDY32691	Canola	cytosol	56.34	57.58
Bra020359.1-P	Field mustard	cytosol, mitochondrion	55.85	57.07
OQU82766	Sorghum	cytosol	63.59	56.85
AT5G58690.1	Thale cress	cytosol	51.73	54.33
Bra002626.1-P	Field mustard	cytosol	50.74	53.1
CDY52121	Canola	cytosol	51.07	52.63
CDX80342	Canola	cytosol	50.91	52.46
Bra005237.1-P	Field mustard	cytosol	12.85	52.35
OQU77319	Sorghum	mitochondrion	51.57	51.99
CDX75008	Canola	cytosol	13.67	47.98
CDY33201	Canola	cytosol	9.39	44.53
AT3G47220.1	Thale cress	cytosol	35.42	40.49
AT3G47290.2	Thale cress	cytosol	36.74	38.92

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	EntrezGene:8084994
InterPro:C2_dom	InterPro:C2_domain_sf	UniProt:C5X6G9	EnsemblPlants:EER99967	ProteinID:EER99967	ProteinID:EER99967.1
InterPro:EF-hand-dom_pair	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0004871	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008081
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016042	GO:GO:0016787
GO:GO:0035556	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892
PFAM:PF00168	PFAM:PF00387	PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PI-PLC_plant	InterPro:PLC-like_Pdiesterase_TIM-brl
InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008
PANTHER:PTHR10336	PANTHER:PTHR10336:SF109	MetaCyc:PWY-6351	MetaCyc:PWY-6367	MetaCyc:PWY-7039	SMART:SM00148
SMART:SM00149	SMART:SM00239	EnsemblPlantsGene:SORBI_3002G430500	SUPFAM:SSF47473	SUPFAM:SSF49562	SUPFAM:SSF51695
unigene:Sbi.4609	UniParc:UPI0001A84936	RefSeq:XP_002463446.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:77610009..77614223

Molecular Weight (calculated)

69368.6 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.593

Length

607 amino acids

Sequence
(BLAST)

001: MGTTYKCCLI FKRRFHARDA PPPEDVRALF SLHTGGGTHM GADGLRRYLD ATQEEASRLD DAEVERLLEQ IRLQQHQGGH RARLPRLARP LLALDDFHRY
101: LFSHDLNPPL RHHQVHHDMT RPLSHYFIYT GHNSYLTGNQ LSSDCSDVPI IKALQRGVRV IELDMWPNST KDDINILHGR TLTTPVSLIK CLISIKEYAF
201: VASPYPVIIT LEDHLPSELQ EKVAKMVLDV FGDILYYPPD SDHLKEFPSP EQLKGRVLLS TKPPKEYLEA KADDTMKEGD ADLHLAKGAN DDAAWGKEVP
301: DFQTEIQSAK KHDDDAPGHQ REDDDDDDDE EEEQKMQPHL APQYKHLITI RAGKPKGSLA DALKSDPEKV RRLSLSEQQL AKVAEDHATE IVRFTQRNIL
401: RIYPKGTRVT SSNYNPFIGW VHGAQMVAFN MQGYGRALWL MHGFYKANGG CGYVKKPDFL MQTEPQVFDP REPQPVKKTL KVKVYMGDGW RMDFKQTHFD
501: QYSPPDFYTR VGIAGVPADS VMKKTKAIED NWMPVWEEEF SFPLTVPEIA LLRVEVHEYD MSEKDDFGGQ TVLPVSELRP GIRAVALFDR KGNKYNNVKL
601: LMRFEFA

Best Arabidopsis Sequence Match ( AT3G08510.1 )
(BLAST)

001: MSKQTYKVCF CFRRRFRYTA SEAPREIKTI FEKYSENGVM TVDHLHRFLI DVQKQDKATR EDAQSIINSA SSLLHRNGLH LDAFFKYLFG DNNPPLALHK
101: VHHDMDAPIS HYFIFTGHNS YLTGNQLSSD CSEVPIIDAL KKGVRVIELD IWPNSNKDDI DVLHGMTLTT PVGLIKCLKA IRAHAFDVSD YPVVVTLEDH
201: LTPDLQSKVA EMVTEIFGEI LFTPPVGESL KEFPSPNSLK RRIIISTKPP KEYKEGKDVE VVQKGKDLGD EEVWGREVPS FIQRNKSEAK DDLDGNDDDD
301: DDDDEDKSKI NAPPQYKHLI AIHAGKPKGG ITECLKVDPD KVRRLSLSEE QLEKAAEKYA KQIVRFTQHN LLRIYPKGTR VTSSNYNPLV GWSHGAQMVA
401: FNMQGYGRSL WLMQGMFRAN GGCGYIKKPD LLLKSGSDSD IFDPKATLPV KTTLRVTVYM GEGWYFDFRH THFDQYSPPD FYTRVGIAGV PGDTVMKKTK
501: TLEDNWIPAW DEVFEFPLTV PELALLRLEV HEYDMSEKDD FGGQTCLPVW ELSEGIRAFP LHSRKGEKYK SVKLLVKVEF V

Arabidopsis Description

PLC2Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:A0A178VDK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.