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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 4
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY52122 Canola cytosol, mitochondrion 97.8 97.96
CDY32691 Canola cytosol 90.0 89.39
CDY71544 Canola cytosol 71.02 86.04
AT5G58700.3 Thale cress cytosol 85.59 84.59
CDY69947 Canola cytosol 22.54 63.64
HORVU0Hr1G012510.3 Barley endoplasmic reticulum 44.07 61.47
GSMUA_Achr5P28270_001 Banana plasma membrane 61.53 61.11
GSMUA_Achr5P08470_001 Banana mitochondrion 60.51 60.3
GSMUA_Achr2P18980_001 Banana mitochondrion 59.66 60.07
CDY01144 Canola cytosol 47.8 60.0
GSMUA_AchrUn_... Banana mitochondrion 56.78 58.77
CDY07623 Canola cytosol 58.31 57.82
GSMUA_Achr10P... Banana cytosol, mitochondrion 57.97 57.67
CDY60344 Canola cytosol 58.64 57.67
Zm00001d014906_P003 Maize plasma membrane 57.12 57.51
Zm00001d014903_P002 Maize mitochondrion 57.12 57.51
CDY27998 Canola cytosol 53.05 57.33
TraesCS5D01G160300.1 Wheat mitochondrion 56.95 57.05
Os07t0694000-01 Rice plasma membrane 57.63 56.86
CDX74806 Canola cytosol 57.8 56.83
Os12t0562400-00 Rice plasma membrane 56.61 56.61
HORVU2Hr1G013730.2 Barley cytosol 53.56 56.53
CDY20520 Canola cytosol 58.14 56.41
TraesCS2B01G098500.1 Wheat cytosol, mitochondrion 57.8 56.27
CDY47356 Canola mitochondrion 53.73 56.21
Zm00001d028746_P001 Maize plastid 55.93 56.03
TraesCS2D01G082000.1 Wheat cytosol, mitochondrion 57.63 56.01
EER99967 Sorghum cytosol, mitochondrion 57.63 56.01
TraesCS2A01G084000.2 Wheat cytosol, mitochondrion 57.8 55.99
CDY22153 Canola mitochondrion 55.08 55.94
CDY07057 Canola cytosol 57.8 55.9
CDY35983 Canola mitochondrion 55.42 55.9
Zm00001d007229_P001 Maize cytosol, mitochondrion 57.29 55.78
CDY61706 Canola cytosol 57.63 55.74
CDY70294 Canola mitochondrion 51.02 55.13
EES16479 Sorghum cytosol, mitochondrion 56.61 54.75
OQU82674 Sorghum cytosol, mitochondrion 56.27 54.25
CDY65008 Canola cytosol 32.03 54.15
CDY27254 Canola mitochondrion 53.39 54.12
CDX72188 Canola mitochondrion 53.05 53.78
TraesCS4B01G195200.2 Wheat cytosol 57.63 53.71
TraesCS4D01G195800.1 Wheat cytosol 57.29 53.4
TraesCS4A01G109000.2 Wheat cytosol 57.29 53.4
CDX80342 Canola cytosol 53.05 53.14
CDY52121 Canola cytosol 53.05 53.14
Os03t0289300-00 Rice plasma membrane 56.61 52.27
HORVU4Hr1G056550.2 Barley cytosol 55.93 51.81
CDY70829 Canola cytosol 42.2 49.6
CDY02827 Canola cytosol 43.39 48.58
OQU92774 Sorghum cytosol 39.66 48.35
CDX80344 Canola cytosol 45.76 48.3
CDY32694 Canola cytosol 43.05 48.2
CDY52120 Canola cytosol, mitochondrion 45.59 48.12
CDY71238 Canola cytosol 32.37 47.16
CDY61028 Canola cytosol, mitochondrion 46.61 45.01
CDX71156 Canola cytosol, mitochondrion 46.61 45.01
CDY68902 Canola cytosol 21.36 43.45
CDX75008 Canola cytosol 12.37 42.2
CDY33201 Canola cytosol 8.64 39.84
OQU82766 Sorghum cytosol 45.59 39.62
CDY26989 Canola cytosol, plastid 11.19 33.33
CDY26990 Canola cytosol 3.9 15.97
Protein Annotations
KEGG:00562+3.1.4.11KEGG:04070+3.1.4.11Gene3D:2.60.40.150Gene3D:3.20.20.190MapMan:5.7.2.3.2GO:A0A078CT60
InterPro:C2_domInterPro:C2_domain_sfEnsemblPlants:CDX80341ProteinID:CDX80341ProteinID:CDX80341.1ncoils:Coil
GO:GO:0003674GO:GO:0003824GO:GO:0004435GO:GO:0004871GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0006629GO:GO:0007154GO:GO:0007165GO:GO:0008081GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016042GO:GO:0016787GO:GO:0035556
EnsemblPlantsGene:GSBRNA2T00133388001InterPro:IPR000008InterPro:IPR000909InterPro:IPR001711InterPro:IPR017946InterPro:IPR035892
PFAM:PF00168PFAM:PF00387PFAM:PF00388InterPro:PI-PLC_famInterPro:PLC-like_Pdiesterase_TIM-brlInterPro:PLipase_C_PInositol-sp_X_dom
InterPro:PLipase_C_Pinositol-sp_YPRINTS:PR00390PFscan:PS50004PFscan:PS50007PFscan:PS50008PANTHER:PTHR10336
PANTHER:PTHR10336:SF101MetaCyc:PWY-6351MetaCyc:PWY-6367MetaCyc:PWY-7039SMART:SM00148SMART:SM00149
SMART:SM00239SUPFAM:SSF49562SUPFAM:SSF51695UniParc:UPI0004EF4B7B::
Description
BnaC09g34010D
Coordinates
chrLK031820:+:1979404..1982100
Molecular Weight (calculated)
67225.4 Da
IEP (calculated)
8.345
GRAVY (calculated)
-0.582
Length
590 amino acids
Sequence
(BLAST)
001: MGSYRMCLIF KRKFRVTEPG PVDDVRDVFE RYAEGQAHMS PEQLRKLMAD ERREDLGSSL EDAERLVDEV LRRKHHIAKF TRRNLTLEDF NYLLFSTELN
101: PPIGDKVHQN MDAPLSHYFI FTGHNSYLTG NQLSSKCSGL PIADALRRGV RVVELDLWPR GKDDVCVKHG GTLTKAVKLG KCLESIKANA FTTSKYPVII
201: TLEDHLTPKL QSKVAKMITQ TFGEMLYYHD SESCKEFPSP EELKGKILIS TKPPKEYLEA NDAKDGEKGK DYSDEDVWGK EPEELVSTQS ELDKVSNSIN
301: FTNQDDEERG SRDFDTSCSL QAPEYKRLIA IHAGKPKGGL KMALKVDPDK IRRLSLSEQL LEKAVASHGA DVIRFTQKNF LRIYPKGTRF NSSNYKPQIG
401: WMSGAQMIAF NMQGYGRALW LMQGMFRANG GCGYVKKPDF LMNVGPNGQV FDPNENSSPK KTLKVKVLMG DGWHLDFKKT HFDRYSPPDF YVKVGIAGAP
501: ADKSMEKTEV KYNTWTPIWN EEFTFQLIVP ELALLRVEVH EYDNNEKDDF GGQTCLPVSE LRQGIRAVPL YNRKGVKYSS TRLLMRFEFV
Best Arabidopsis Sequence Match ( AT5G58700.3 )
(BLAST)
001: MEGKKEMGSY KFCLIFTRKF RMTESGPVED VRDLFEKYTE GDAHMSPEQL QKLMTEEGGE GETSLEEAER IVDEVLRRKH HIAKFTRRNL TLDDFNYYLF
101: STDLNPPIAD QVHQNMDAPL SHYFIFTGHN SYLTGNQLSS NCSELPIADA LRRGVRVVEL DLWPRGTDDV CVKHGRTLTK EVKLGKCLES IKANAFAISK
201: YPVIITLEDH LTPKLQFKVA KMITQTFGDM LYYHDSQGCQ EFPSPEELKE KILISTKPPK EYLEANDTKE KDNGEKGKDS DEDVWGKEPE DLISTQSDLD
301: KVTSSVNDLN QDDEERGSCE SDTSCQLQAP EYKRLIAIHA GKPKGGLRMA LKVDPNKIRR LSLSEQLLEK AVASYGADVI RFTQKNFLRI YPKGTRFNSS
401: NYKPQIGWMS GAQMIAFNMQ GYGRALWLME GMFRANGGCG YVKKPDFLMD ASPNGQDFYP KDNSSPKKTL KVKVCMGDGW LLDFKKTHFD SYSPPDFFVR
501: VGIAGAPVDE VMEKTKIEYD TWTPIWNKEF TFPLAVPELA LLRVEVHEHD VNEKDDFGGQ TCLPVSEIRQ GIRAVPLFNR KGVKYSSTRL LMRFEFV
Arabidopsis Description
PLC4Phosphoinositide phospholipase C 4 [Source:UniProtKB/Swiss-Prot;Acc:Q944C1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.