CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61706	Canola	cytosol	98.09	33.61
CDY07057	Canola	cytosol	98.09	33.61
CDY33201	Canola	cytosol	20.57	33.59
CDX75008	Canola	cytosol	27.75	33.53
AT2G40116.1	Thale cress	cytosol	92.82	31.65
Bra017030.1-P	Field mustard	cytosol	89.47	31.32
CDY65008	Canola	cytosol	52.15	31.23
CDY07623	Canola	cytosol	88.04	30.92
CDY60344	Canola	cytosol	88.04	30.67
CDY20520	Canola	cytosol	89.0	30.59
CDX74806	Canola	cytosol	87.08	30.33
CDY01144	Canola	cytosol	58.85	26.17
KRH14952	Soybean	cytosol	46.89	25.19
CDY71544	Canola	cytosol	58.37	25.05
KRG97734	Soybean	cytosol	65.07	24.42
VIT_13s0067g00890.t01	Wine grape	cytosol	67.46	23.82
PGSC0003DMT400016940	Potato	cytosol, mitochondrion	66.99	23.69
Solyc06g051630.2.1	Tomato	cytosol, mitochondrion	66.99	23.61
CDY27998	Canola	cytosol	60.77	23.26
CDY52122	Canola	cytosol, mitochondrion	63.64	22.58
CDX80341	Canola	mitochondrion	63.64	22.54
KRH14947	Soybean	cytosol, mitochondrion	63.64	22.32
KRH31146	Soybean	nucleus	64.59	22.13
CDY35983	Canola	mitochondrion	61.24	21.88
CDY22153	Canola	mitochondrion	60.77	21.86
CDY47356	Canola	mitochondrion	58.85	21.81
KRH73189	Soybean	cytosol	62.2	21.52
CDY32691	Canola	cytosol	60.77	21.38
KRH31144	Soybean	cytosol	58.85	21.1
CDY27254	Canola	mitochondrion	58.37	20.96
CDY70294	Canola	mitochondrion	54.07	20.7
CDX72188	Canola	mitochondrion	57.42	20.62
CDY70829	Canola	cytosol	48.8	20.32
KRH14948	Soybean	cytosol	57.89	20.07
KRH73188	Soybean	cytosol	55.5	19.53
CDX80344	Canola	cytosol	52.15	19.5
CDY52120	Canola	cytosol, mitochondrion	51.67	19.32
KRG97735	Soybean	cytosol	57.42	19.29
CDX80342	Canola	cytosol	51.67	18.34
CDY52121	Canola	cytosol	51.2	18.17
CDX71156	Canola	cytosol, mitochondrion	52.63	18.0
CDY61028	Canola	cytosol, mitochondrion	52.15	17.84
CDY02827	Canola	cytosol	43.06	17.08
CDY32694	Canola	cytosol	43.06	17.08
CDY71238	Canola	cytosol	33.01	17.04
Solyc03g096070.2.1	Tomato	cytosol, mitochondrion	63.64	15.05
PGSC0003DMT400031174	Potato	cytosol, mitochondrion	62.68	14.82
CDY26989	Canola	cytosol, plastid	13.4	14.14
CDY26990	Canola	cytosol	1.44	2.08
CDY68902	Canola	cytosol	1.44	1.03

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	GO:A0A078JWK4	UniProt:A0A078JWK4
EnsemblPlants:CDY69947	ProteinID:CDY69947	ProteinID:CDY69947.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165
GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016042
GO:GO:0016787	GO:GO:0035556	EnsemblPlantsGene:GSBRNA2T00093675001	InterPro:IPR001711	InterPro:IPR017946	PFAM:PF00387
InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50008	PANTHER:PTHR10336
PANTHER:PTHR10336:SF101	MetaCyc:PWY-6351	MetaCyc:PWY-6367	MetaCyc:PWY-7039	SMART:SM00149	SUPFAM:SSF51695
UniParc:UPI0004EE0A94	SEG:seg	:	:	:	:

Description

BnaAnng32110DPhosphoinositide phospholipase C (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JWK4]

Coordinates

chrLK040742:+:964..2095

Molecular Weight (calculated)

24491.7 Da

IEP (calculated)

10.130

GRAVY (calculated)

-0.724

Length

209 amino acids

Sequence
(BLAST)

001: SDSDQQEEEE EASEEQKPVY KRLITIHAGK PKGSVKEEMK VAVDKVRRLS LSEQELDRTC SSNSQDVVRF TQRNLLRIYP KRTRINSSNY KPLIGWTHGA
101: QMIAFNMQGY GKSLWMMHGM FRANGGCRYV KKPNFLMKKG FHEEVFDPRK KLPVKETLKA MYMGDGWRLD FSHTHFDAYS PPDFYTKMFI VGKGEKMKSV
201: RLLMRFIFE

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.