Factsheet for Solyc06g051630.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
cytosol 2
plasma membrane 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400016940	Potato	cytosol, mitochondrion	96.63	96.95
CDY69947	Canola	cytosol	23.61	66.99
VIT_13s0067g00890.t01	Wine grape	cytosol	65.6	65.71
KRG97734	Soybean	cytosol	60.71	64.63
CDY07623	Canola	cytosol	64.76	64.54
CDY60344	Canola	cytosol	65.09	64.33
CDY61706	Canola	cytosol	66.1	64.26
CDY07057	Canola	cytosol	65.77	63.93
AT2G40116.1	Thale cress	cytosol	65.94	63.78
Bra000168.1-P	Field mustard	cytosol	65.09	63.7
CDX74806	Canola	cytosol	64.25	63.5
Solyc06g007120.2.1	Tomato	nucleus	62.73	63.37
CDY20520	Canola	cytosol	64.76	63.16
Bra004987.1-P	Field mustard	cytosol	64.59	62.89
Bra017030.1-P	Field mustard	cytosol	63.24	62.81
KRH14947	Soybean	cytosol, mitochondrion	62.39	62.08
KRH73189	Soybean	cytosol	61.38	60.26
Solyc05g052760.2.1	Tomato	plastid	59.19	60.21
KRH31146	Soybean	nucleus	60.37	58.69
Solyc06g051620.2.1	Tomato	cytosol, mitochondrion	54.81	57.52
Solyc10g076710.1.1	Tomato	cytosol	57.84	57.07
KRH14948	Soybean	cytosol	57.0	56.05
KRH31144	Soybean	cytosol	53.12	54.03
KRH73188	Soybean	cytosol	53.79	53.7
Solyc03g096070.2.1	Tomato	cytosol, mitochondrion	77.07	51.7
KRG97735	Soybean	cytosol	54.13	51.61
Solyc06g082000.2.1	Tomato	cytosol	48.74	51.06
KRH14952	Soybean	cytosol	29.85	45.5

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:1.10.238.10	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2
InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:EF-hand-dom_pair	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435
GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154
GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016042	GO:GO:0016787	GO:GO:0035556	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711
InterPro:IPR017946	InterPro:IPR035892	UniProt:K4C5V4	EMBL:KM587010	PFAM:PF00168	PFAM:PF00387
PFAM:PF00388	PFAM:PF09279	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLC_EF-hand-like	InterPro:PLipase_C_PInositol-sp_X_dom
InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336
PANTHER:PTHR10336:SF101	SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562
SUPFAM:SSF51695	EnsemblPlantsGene:Solyc06g051630.2	EnsemblPlants:Solyc06g051630.2.1	UniParc:UPI00027670CC	SEG:seg	:

Description

Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:K4C5V4]

Coordinates

chr6:-:35177591..35180877

Molecular Weight (calculated)

68560.6 Da

IEP (calculated)

7.166

GRAVY (calculated)

-0.636

Length

593 amino acids

Sequence
(BLAST)

001: MGSSYNYYRM FGCFNRKFKI REREPPPDVR NAFFRYTGKA NQMNADQLFR YLVEVQGEEE CTIKDAEQII QNVASRRHHL IRRLNHSLEL DDFFFYLFQD
101: DLNGAIKSQV HHDMTAPLQH YFIYTGHNSY LTGNQLSSDC SEIPIVKALE RGVRGIELDL WPNSGKDNIH VLHGRTLTTP VPLLKCLKAI RDHAFFKSPY
201: PVIITLEDHL TPDLQAKVAE MVIQIFGEML YYPQSECLDE FPSPEELKNR IILSTKPPKE YLESKNQRDT SPVGKDSFRE DLLKKEKSEI GAEDHDTDER
301: SDSDQDDEDG DTSTSNDQQS SQPEAPKYKS LIAVHAGKAK HGLKRALREE SNKVSRLSLS EQEVVRAAEY YGTDLVRFTQ KNILRVYPKG TRVTSSNFKP
401: MTGWMHGAQM VAFNMQGYGK SLWMMHGMFR SNGSCGYVKK PQFLMDKGPN NEVFDPKVKL PVKQTLQVRV YMGDGWRLDF SHTHFDAYSP PDFYTKLYLV
501: GVPADSRKKK TRILEDDWCP VWDEEFNFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VSELRTGIRS VPLYDKKGHK MKSVRLLMRF QFL

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.