Factsheet for Bra000168.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07623	Canola	cytosol	98.18	100.0
CDY60344	Canola	cytosol	98.68	99.67
Bra004987.1-P	Field mustard	cytosol	92.24	91.79
AT2G40116.1	Thale cress	cytosol	91.91	90.86
Bra017030.1-P	Field mustard	cytosol	88.12	89.45
PGSC0003DMT400016940	Potato	cytosol, mitochondrion	63.86	65.48
Solyc06g051630.2.1	Tomato	cytosol, mitochondrion	63.7	65.09
KRG97734	Soybean	cytosol	58.91	64.09
VIT_13s0067g00890.t01	Wine grape	cytosol	62.21	63.68
KRH14947	Soybean	cytosol, mitochondrion	60.07	61.07
KRH73189	Soybean	cytosol	60.4	60.6
Bra040049.1-P	Field mustard	cytosol	52.97	59.23
Bra002625.1-P	Field mustard	mitochondrion	57.26	58.91
KRH31146	Soybean	nucleus	58.91	58.52
Bra029697.1-P	Field mustard	mitochondrion	54.46	58.51
Bra007201.1-P	Field mustard	mitochondrion	51.98	57.69
Bra020359.1-P	Field mustard	cytosol, mitochondrion	55.94	57.07
Bra032722.1-P	Field mustard	mitochondrion	51.98	55.95
KRH14948	Soybean	cytosol	54.29	54.56
KRH73188	Soybean	cytosol	53.47	54.55
Bra002626.1-P	Field mustard	cytosol	50.66	52.93
KRH31144	Soybean	cytosol	50.83	52.83
KRG97735	Soybean	cytosol	51.16	49.84
Bra020361.1-P	Field mustard	cytosol	42.08	48.3
Bra002627.1-P	Field mustard	cytosol	41.58	47.28
Bra005237.1-P	Field mustard	cytosol	11.39	46.31
Bra033567.1-P	Field mustard	cytosol	40.43	46.23
Bra006749.1-P	Field mustard	cytosol, mitochondrion	44.22	43.86
KRH14952	Soybean	cytosol	27.89	43.44
Solyc03g096070.2.1	Tomato	cytosol, mitochondrion	62.87	43.1
PGSC0003DMT400031174	Potato	cytosol, mitochondrion	62.54	42.87
Bra039499.1-P	Field mustard	cytosol	11.88	24.24

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	EnsemblPlantsGene:Bra000168
EnsemblPlants:Bra000168.1	EnsemblPlants:Bra000168.1-P	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:EF-hand-dom_pair	GO:GO:0003674
GO:GO:0003824	GO:GO:0004435	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016042	GO:GO:0016787	GO:GO:0035556	InterPro:IPR000008
InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892	UniProt:M4C7J0	PFAM:PF00168
PFAM:PF00387	PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y
PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008	PANTHER:PTHR10336	PANTHER:PTHR10336:SF101
SMART:SM00148	SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562	SUPFAM:SSF51695
UniParc:UPI000254025D	SEG:seg	:	:	:	:

Description

AT2G40116 (E=1e-261) | phosphoinositide-specific phospholipase C family protein

Coordinates

chrA03:+:9681787..9684388

Molecular Weight (calculated)

69099.8 Da

IEP (calculated)

6.081

GRAVY (calculated)

-0.564

Length

606 amino acids

Sequence
(BLAST)

001: MGKEKKTESY DNGSYNYKMF KCFNRKFKIN EVQPTDDVRD AFCQFSVGGS GRGAGGDGDS SDDGVMGAEQ LCSFLDDNQV NSATTVAEAQ RLIDEVIRRR
101: HHVTRFTRHG LDLDDFFNFL FYDDLNPPIT PNVHQDMSAP LSHYFIYTGH NSYLTGNQLS SDCSEVPVIK ALQRGVRVIE LDLWPNSTGT DINVLHGRTL
201: TTPVPLITCL KSIRDHAFSS SPYPVIITLE DHLTADLQAK VAEMATQIFG QMLYYPESES LEEFPSPASL LHRIIISTKP PKEYLESRNP IGKQKENGNV
301: SPSSEEETPG TEEIQTLESI LFYQDCDNKS DSDQEEEEAS EDQKPAYKRL ITIHAGKPKG TVKEEMKVVV DKVRRLSLSE QELDRTCSSN SQDVVRFTQK
401: NLLRIYPKGT RFNSSNYKPL IGWTHGAQMI AFNMQGYGRS LWLMHGMFRA NGGCGYVKKP NFLMKKGFHD EVFDPKKKLH VKVYMGDGWR LDFSHTHFDT
501: YSPPDFYTKV FIVGVPADNA KRKTRVIEDN WYPIWDEEFS FPLTVPELAL LRIEVREYDM SDKDDFGGQT CLPVSELRPG IRSVPLYDKK GEKMKSVRLL
601: MRFIFE

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.