CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73189	Soybean	cytosol	93.96	92.72
KRG97734	Soybean	cytosol	71.48	76.48
KRH31146	Soybean	nucleus	70.81	69.18
CDY69947	Canola	cytosol	22.32	63.64
PGSC0003DMT400016940	Potato	cytosol, mitochondrion	62.25	62.77
Solyc06g051630.2.1	Tomato	cytosol, mitochondrion	62.08	62.39
VIT_13s0067g00890.t01	Wine grape	cytosol	60.74	61.15
CDY07623	Canola	cytosol	60.74	60.84
KRH14948	Soybean	cytosol	61.41	60.7
CDY60344	Canola	cytosol	61.07	60.67
CDY07057	Canola	cytosol	61.91	60.49
CDY61706	Canola	cytosol	61.91	60.49
AT2G40116.1	Thale cress	cytosol	61.91	60.2
Bra000168.1-P	Field mustard	cytosol	61.07	60.07
Bra017030.1-P	Field mustard	cytosol	60.07	59.97
CDX74806	Canola	cytosol	60.07	59.67
Bra004987.1-P	Field mustard	cytosol	60.74	59.44
KRH73188	Soybean	cytosol	59.23	59.43
CDY20520	Canola	cytosol	60.4	59.21
KRH14945	Soybean	mitochondrion	59.56	59.17
KRH31148	Soybean	mitochondrion	58.56	58.95
KRH73190	Soybean	endoplasmic reticulum	59.23	58.83
KRG97732	Soybean	mitochondrion	58.39	58.78
KRH31144	Soybean	cytosol	56.54	57.8
KRH72676	Soybean	cytosol, mitochondrion	35.07	55.59
KRG97735	Soybean	cytosol	57.72	55.31
KRH17039	Soybean	cytosol, mitochondrion	51.01	52.78
KRH14952	Soybean	cytosol	32.38	49.61
PGSC0003DMT400031174	Potato	cytosol, mitochondrion	61.07	41.18
Solyc03g096070.2.1	Tomato	cytosol, mitochondrion	60.91	41.06

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	EMBL:ACUP02008546
InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:EF-hand-dom_pair	EnsemblPlantsGene:GLYMA_14G059300	GO:GO:0003674	GO:GO:0003824
GO:GO:0004435	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629
GO:GO:0007154	GO:GO:0007165	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016042	GO:GO:0016787	GO:GO:0035556	UniProt:I1M7T8	InterPro:IPR000008
InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946	InterPro:IPR035892	EnsemblPlants:KRH14947	ProteinID:KRH14947
ProteinID:KRH14947.1	PFAM:PF00168	PFAM:PF00387	PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl
InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008
PANTHER:PTHR10336	PANTHER:PTHR10336:SF101	MetaCyc:PWY-6351	MetaCyc:PWY-6367	MetaCyc:PWY-7039	SMART:SM00148
SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562	SUPFAM:SSF51695	UniParc:UPI000296F63F
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:4799518..4804826

Molecular Weight (calculated)

67680.3 Da

IEP (calculated)

6.733

GRAVY (calculated)

-0.508

Length

596 amino acids

Sequence
(BLAST)

001: MGTVTYSYKM FKYFNRKFAV SEQAPPPDVK EAFSAFSDAA AASMSADQLL RFLHDHQRET DCSAEDSNRI LDSIIQSRKQ NDTNAECDHH TDNNNNGLSL
101: DEFFRFLFLV DFNDPLKSQV HHDMNAPLSH YFIYTGHNSY LTGNQLSSDC SDVPIIKALQ RGVRVIELDL WPNSTKDDID VVHGRTLTAP VSLIQCLKSI
201: KEYAFVKSDY PVIITLEDHL TPFLQAKVAE MIAQVFGDML YFPQADSLTE FPTPESLKGR ILISTKPPKE YLESKQFKDS DSERESTEEG SLSPCVIPEL
301: EAVDEKLNGS DLDEEGLNAR DKKSDQQSAP EYKRLITIHA GKPKGHVKHH LNNVGGVKRL SLSEQELEKA SATYGSDIVR FTQKNIIRVY PKGTRVTSSN
401: YRPHIGWMYG AQMVAFNMQG HGKSLWYMQG MFRANGGCGY VKKPAFLIEK GPHNEVFDPK RALPVKKTLK VKVYMGNGWS SDFSKTHFDS FSPPDFYTKV
501: CIVGVPADKA NKKTKVIQDN WFPVWDEEFE FPLTVPELAL LRIEVREYDK HEKDDFGGQT CLPISELRSG FRAVPLFDQK GEQLKSVKLL MRFQFK

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.