CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69947	Canola	cytosol	33.61	98.09
CDY07057	Canola	cytosol	97.38	97.38
Bra017030.1-P	Field mustard	cytosol	94.59	96.65
CDY60344	Canola	cytosol	89.67	91.17
AT2G40116.1	Thale cress	cytosol	91.48	91.03
CDY07623	Canola	cytosol	88.69	90.92
CDX74806	Canola	cytosol	87.54	89.0
CDY20520	Canola	cytosol	88.36	88.65
PGSC0003DMT400016940	Potato	cytosol, mitochondrion	64.43	66.5
Solyc06g051630.2.1	Tomato	cytosol, mitochondrion	64.26	66.1
KRG97734	Soybean	cytosol	59.51	65.17
VIT_13s0067g00890.t01	Wine grape	cytosol	62.95	64.86
KRH14947	Soybean	cytosol, mitochondrion	60.49	61.91
CDY01144	Canola	cytosol	47.05	61.06
KRH73189	Soybean	cytosol	60.16	60.76
CDY71544	Canola	cytosol	47.05	58.93
KRH31146	Soybean	nucleus	58.85	58.85
CDY27998	Canola	cytosol	52.46	58.61
CDY22153	Canola	mitochondrion	55.57	58.35
CDY70294	Canola	mitochondrion	51.97	58.06
CDY52122	Canola	cytosol, mitochondrion	55.74	57.73
CDX80341	Canola	mitochondrion	55.74	57.63
CDY35983	Canola	mitochondrion	54.75	57.09
CDY47356	Canola	mitochondrion	52.79	57.09
CDY32691	Canola	cytosol	54.92	56.4
CDY27254	Canola	mitochondrion	53.77	56.36
CDX72188	Canola	mitochondrion	53.28	55.84
KRH14948	Soybean	cytosol	54.75	55.39
KRH73188	Soybean	cytosol	53.28	54.71
KRH31144	Soybean	cytosol	50.82	53.17
CDY52121	Canola	cytosol	51.15	52.97
CDX80342	Canola	cytosol	50.82	52.63
KRG97735	Soybean	cytosol	51.31	50.32
CDY65008	Canola	cytosol	28.69	50.14
CDY52120	Canola	cytosol, mitochondrion	45.08	49.2
CDX80344	Canola	cytosol	44.92	49.02
CDY70829	Canola	cytosol	39.67	48.21
CDY02827	Canola	cytosol	41.64	48.2
CDY32694	Canola	cytosol	41.64	48.2
CDY71238	Canola	cytosol	31.48	47.41
CDY33201	Canola	cytosol	9.34	44.53
CDY61028	Canola	cytosol, mitochondrion	44.59	44.52
CDX71156	Canola	cytosol, mitochondrion	44.43	44.35
CDX75008	Canola	cytosol	12.46	43.93
CDY68902	Canola	cytosol	20.82	43.79
KRH14952	Soybean	cytosol	27.87	43.7
Solyc03g096070.2.1	Tomato	cytosol, mitochondrion	61.97	42.76
PGSC0003DMT400031174	Potato	cytosol, mitochondrion	61.64	42.53
CDY26989	Canola	cytosol, plastid	10.98	33.84
CDY26990	Canola	cytosol	3.93	16.67

Protein Annotations

KEGG:00562+3.1.4.11	KEGG:04070+3.1.4.11	Gene3D:2.60.40.150	Gene3D:3.20.20.190	MapMan:5.7.2.3.2	GO:A0A078JBC1
UniProt:A0A078JBC1	InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlants:CDY61706	ProteinID:CDY61706	ProteinID:CDY61706.1
InterPro:EF-hand-dom_pair	GO:GO:0003674	GO:GO:0003824	GO:GO:0004435	GO:GO:0004871	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008081
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016042	GO:GO:0016787
GO:GO:0035556	EnsemblPlantsGene:GSBRNA2T00034250001	InterPro:IPR000008	InterPro:IPR000909	InterPro:IPR001711	InterPro:IPR017946
InterPro:IPR035892	PFAM:PF00168	PFAM:PF00387	PFAM:PF00388	InterPro:PI-PLC_fam	InterPro:PLC-like_Pdiesterase_TIM-brl
InterPro:PLipase_C_PInositol-sp_X_dom	InterPro:PLipase_C_Pinositol-sp_Y	PRINTS:PR00390	PFscan:PS50004	PFscan:PS50007	PFscan:PS50008
PANTHER:PTHR10336	PANTHER:PTHR10336:SF101	MetaCyc:PWY-6351	MetaCyc:PWY-6367	MetaCyc:PWY-7039	SMART:SM00148
SMART:SM00149	SMART:SM00239	SUPFAM:SSF47473	SUPFAM:SSF49562	SUPFAM:SSF51695	UniParc:UPI0004EEFECE
SEG:seg	:	:	:	:	:

Description

BnaC04g56690DPhosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:A0A078JBC1]

Coordinates

chrLK034030:-:332..2850

Molecular Weight (calculated)

69669.0 Da

IEP (calculated)

6.764

GRAVY (calculated)

-0.555

Length

610 amino acids

Sequence
(BLAST)

001: MGKEKKTESH SNGSYNYKMF KCFNRKFKIN EVQPTNDVRD AFCKFSVGGG GGGGDGDRSS GVMGAEQLCS FLDDHHVHSV TTVAEAQRLI DEVIRRRHHV
101: TRFTRHGLDL DDFFNFLFYD DLNPPIKSHV HQDMTAPLSH YFIYTGHNSY LTGNQLSSDC SEVPVIKALQ RGVRVIELDL WPNSTGTDIN VLHGRTLTTP
201: VPLIKCLKSI RDYAFSSSPY PVIITLEDHL TADLQAKVAE MATKIFGQML YYPESDNLEE FPSPASLLHR IIISTKPPKE YLESRNPLVK QKDNSNVCPS
301: SEEETLVTEE IQTLESMLSC DDSETKSDSD QQEEEEEASE EQKPVYKRLI TIHAGKPKGS VKEEMKGAVD KVRRLSLSEQ ELDRTCSSNS QDVVRFTQKN
401: LLRIYPKGTR INSSNYKPLI GWTHGAQMIA FNMQGYGKSL WMMHGMFRAN GGCGYVKKPN FLMKKGFHEE VFDPRKKLPV KETLKAMYMG DGWRLDFSHT
501: HFDAYSPPDF YTKMFIVGVP ADNAKRKTKI IEDNWYPIWD EEFSFPLTVP ELALLRIEVR EYDMSEKDDF GGQTCLPVSE LRPGIRSVPL YDKKGEKMKS
601: VRLLMRFIFE

Best Arabidopsis Sequence Match ( AT2G40116.1 )
(BLAST)

001: MGKEKKTESY NNDSGSYNYR MFKFYNRKFK INEVTPTDDV RDAFCQFAVG GGGGGTDGDS SDGDGSTGVM GAEQLCSFLD DHGESTTVAE AQRLIDEVIR
101: RRHHVTRFTR HGLDLDDFFN FLFYDDLNPP ITPHVHQDMT APLSHYFIYT GHNSYLTGNQ LSSDCSEVPV IKALQRGVRV IELDLWPNST GTDINVLHGR
201: TLTTPVPLMK CLKSIRDYAF SSSPYPVIIT LEDHLTPDLQ AKVAEMATQI FGQMLYYPES DSLLEFPSPA SLLHRIIIST KPPKEYLESR NPIVKQKDNN
301: VSPSSEDETP RTEEIQTLES MLFDQDFESK SDSDQEDEEA SEDQKPAYKR LITIHAGKPK GTVKEEMKVV VDKVRRLSLS EQELDRTCSS NSQDVVRFTQ
401: RNLLRIYPKG TRFNSSNYKP LIGWTHGAQM IAFNMQGYGK SLWLMHGMFR ANGGCGYVKK PNFLMKKGFH DEVFDPRKKL PVKETLKVKV YMGDGWRMDF
501: SHTHFDAYSP PDFYTKMFIV GVPADNAKKK TKIIEDNWYP IWDEEFSFPL TVPELALLRI EVREYDMSEK DDFGGQTCLP VAELRPGIRS VPLYDKKGEK
601: MKSVRLLMRF IFE

Arabidopsis Description

PLC6Phosphoinositide phospholipase C 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GV43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.